RNA–Protein interactions for RNA: ENST00000396340.1

CDKN1B-202, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3 BASIC

Gene CDKN1B, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-202ENST00000396340 IGLV4-69A0A075B6H9 119 aa12.36□□□□□ -0.43
CDKN1B-202ENST00000396340 SEC11AP67812 179 aa12.36□□□□□ -0.43
CDKN1B-202ENST00000396340 COX6A2Q02221 97 aa12.36□□□□□ -0.43
CDKN1B-202ENST00000396340 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.36□□□□□ -0.43
CDKN1B-202ENST00000396340 RNASE13Q5GAN3 156 aaKnown RBP12.35□□□□□ -0.43
CDKN1B-202ENST00000396340 C2orf66Q6UXQ4 117 aa12.35□□□□□ -0.43
CDKN1B-202ENST00000396340 C7orf33Q8WU49 177 aa12.35□□□□□ -0.43
CDKN1B-202ENST00000396340 ABCA13Q86UQ4 5058 aa12.34□□□□□ -0.43
CDKN1B-202ENST00000396340 IGHV3OR16-9A0A0B4J2B5 98 aa12.34□□□□□ -0.43
CDKN1B-202ENST00000396340 RPL37AP61513 92 aaKnown RBP12.34□□□□□ -0.43
CDKN1B-202ENST00000396340 RNF151Q2KHN1 245 aa12.34□□□□□ -0.43
CDKN1B-202ENST00000396340 CAMK2N2Q96S95 79 aa12.34□□□□□ -0.43
CDKN1B-202ENST00000396340 VCX2Q9H322 139 aa12.34□□□□□ -0.43
CDKN1B-202ENST00000396340 RPS10P5Q9NQ39 176 aa12.34□□□□□ -0.43
CDKN1B-202ENST00000396340 LINC01561Q8N1V8 128 aa12.33□□□□□ -0.44
CDKN1B-202ENST00000396340 SVBPQ8N300 66 aa12.33□□□□□ -0.44
CDKN1B-202ENST00000396340 PRSS3P2Q8NHM4 247 aa12.33□□□□□ -0.44
CDKN1B-202ENST00000396340 PLAC8Q9NZF1 115 aa12.33□□□□□ -0.44
CDKN1B-202ENST00000396340 IGLV4-3A0A075B6K6 122 aa12.32□□□□□ -0.44
CDKN1B-202ENST00000396340 A0A087WYN8 130 aa12.32□□□□□ -0.44
CDKN1B-202ENST00000396340 LOC107984640A0A0U1RRK4 108 aa12.32□□□□□ -0.44
CDKN1B-202ENST00000396340 SNAPINO95295 136 aa12.32□□□□□ -0.44
CDKN1B-202ENST00000396340 C5orf38Q86SI9 138 aa12.32□□□□□ -0.44
CDKN1B-202ENST00000396340 TIMM17AQ99595 171 aa12.31□□□□□ -0.44
CDKN1B-202ENST00000396340 A0A087WZ39 114 aa12.3□□□□□ -0.44
CDKN1B-202ENST00000396340 SPAG11BQ08648 103 aa12.3□□□□□ -0.44
CDKN1B-202ENST00000396340 MAJINQ3KP22 176 aa12.3□□□□□ -0.44
CDKN1B-202ENST00000396340 DNAH8Q96JB1 4490 aa12.29□□□□□ -0.44
CDKN1B-202ENST00000396340 IGKV2-24A0A0C4DH68 120 aa12.28□□□□□ -0.44
CDKN1B-202ENST00000396340 NDUFA1O15239 70 aa12.28□□□□□ -0.44
CDKN1B-202ENST00000396340 ERASQ7Z444 233 aa12.28□□□□□ -0.44
CDKN1B-202ENST00000396340 ORAOV1Q8WV07 137 aa12.28□□□□□ -0.44
CDKN1B-202ENST00000396340 FAM104AQ969W3 186 aa12.28□□□□□ -0.44
CDKN1B-202ENST00000396340 TOMM6Q96B49 74 aa12.28□□□□□ -0.44
CDKN1B-202ENST00000396340 AMELXQ99217 191 aa12.28□□□□□ -0.44
CDKN1B-202ENST00000396340 OPRPNQ99935 248 aaPredicted RBP12.28□□□□□ -0.44
CDKN1B-202ENST00000396340 SMCO4Q9NRQ5 59 aa12.28□□□□□ -0.44
CDKN1B-202ENST00000396340 MRPL35Q9NZE8 188 aaKnown RBP12.28□□□□□ -0.44
CDKN1B-202ENST00000396340 VPS13BQ7Z7G8 4022 aa12.27□□□□□ -0.44
CDKN1B-202ENST00000396340 IGIPA6NJ69 53 aa12.27□□□□□ -0.45
CDKN1B-202ENST00000396340 HERVK_113P63121 156 aa12.27□□□□□ -0.45
CDKN1B-202ENST00000396340 LINC00242Q5T6M2 205 aa12.27□□□□□ -0.45
CDKN1B-202ENST00000396340 FAM19A3Q7Z5A8 133 aa12.27□□□□□ -0.45
CDKN1B-202ENST00000396340 STPG4Q8N801 248 aa12.27□□□□□ -0.45
CDKN1B-202ENST00000396340 DMBT1Q9UGM3 2413 aaPredicted RBP12.26□□□□□ -0.45
CDKN1B-202ENST00000396340 LINC01546A6NGU7 62 aa12.26□□□□□ -0.45
CDKN1B-202ENST00000396340 PANO1I0J062 215 aa12.26□□□□□ -0.45
CDKN1B-202ENST00000396340 APOC3P02656 99 aa12.26□□□□□ -0.45
CDKN1B-202ENST00000396340 CHTF8P0CG12 524 aa12.26□□□□□ -0.45
CDKN1B-202ENST00000396340 UBE2D1P51668 147 aa12.26□□□□□ -0.45
CDKN1B-202ENST00000396340 FABP9Q0Z7S8 132 aa12.26□□□□□ -0.45
CDKN1B-202ENST00000396340 ALKBH7Q9BT30 221 aaPredicted RBP12.26□□□□□ -0.45
CDKN1B-202ENST00000396340 MRPL18Q9H0U6 180 aaKnown RBP12.26□□□□□ -0.45
CDKN1B-202ENST00000396340 A0A096LNI7 61 aa12.25□□□□□ -0.45
CDKN1B-202ENST00000396340 OXTP01178 125 aa12.25□□□□□ -0.45
CDKN1B-202ENST00000396340 PTTG1IPP53801 180 aa12.25□□□□□ -0.45
CDKN1B-202ENST00000396340 KIAA1644Q3SXP7 199 aa12.25□□□□□ -0.45
CDKN1B-202ENST00000396340 Q6ZRU5 148 aa12.25□□□□□ -0.45
CDKN1B-202ENST00000396340 FA2HQ7L5A8 372 aa12.25□□□□□ -0.45
CDKN1B-202ENST00000396340 FLG2Q5D862 2391 aaPredicted RBP12.25□□□□□ -0.45
CDKN1B-202ENST00000396340 FAT1Q14517 4588 aa12.24□□□□□ -0.45
CDKN1B-202ENST00000396340 KRTAP29-1A8MX34 341 aaPredicted RBP12.24□□□□□ -0.45
CDKN1B-202ENST00000396340 J3QL48 77 aa12.24□□□□□ -0.45
CDKN1B-202ENST00000396340 LINC00526Q96FQ7 95 aa12.24□□□□□ -0.45
CDKN1B-202ENST00000396340 SCGB3A1Q96QR1 104 aa12.24□□□□□ -0.45
CDKN1B-202ENST00000396340 GEMIN7Q9H840 131 aaKnown RBP12.23□□□□□ -0.45
CDKN1B-202ENST00000396340 TRBV30A0A0K0K1B3 111 aa12.22□□□□□ -0.45
CDKN1B-202ENST00000396340 PRSS2P07478 247 aa12.22□□□□□ -0.45
CDKN1B-202ENST00000396340 KRTAP10-4P60372 401 aaPredicted RBP12.22□□□□□ -0.45
CDKN1B-202ENST00000396340 RAB5BP61020 215 aa12.22□□□□□ -0.45
CDKN1B-202ENST00000396340 PACRGQ96M98 296 aaPredicted RBP12.21□□□□□ -0.45
CDKN1B-202ENST00000396340 TRAPPC1Q9Y5R8 145 aa12.21□□□□□ -0.45
CDKN1B-202ENST00000396340 TLX1NBP0CAT3 122 aa12.2□□□□□ -0.46
CDKN1B-202ENST00000396340 RPL18AQ02543 176 aaKnown RBP12.19□□□□□ -0.46
CDKN1B-202ENST00000396340 GAGE2BQ13066 116 aa12.19□□□□□ -0.46
CDKN1B-202ENST00000396340 LINC00173Q6ZV60 143 aa12.19□□□□□ -0.46
CDKN1B-202ENST00000396340 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.18□□□□□ -0.46
CDKN1B-202ENST00000396340 CKS1BP61024 79 aa12.18□□□□□ -0.46
CDKN1B-202ENST00000396340 CXCL5P42830 114 aa12.17□□□□□ -0.46
CDKN1B-202ENST00000396340 C6orf226Q5I0X4 101 aa12.17□□□□□ -0.46
CDKN1B-202ENST00000396340 Q8IZM0 81 aa12.17□□□□□ -0.46
CDKN1B-202ENST00000396340 TINCRA0A1B0GVN0 87 aa12.15□□□□□ -0.46
CDKN1B-202ENST00000396340 LINC00614P0C842 121 aa12.15□□□□□ -0.46
CDKN1B-202ENST00000396340 Q6ZRP5 223 aa12.15□□□□□ -0.46
CDKN1B-202ENST00000396340 KIAA0087Q14695 138 aa12.14□□□□□ -0.47
CDKN1B-202ENST00000396340 PMVKQ15126 192 aa12.14□□□□□ -0.47
CDKN1B-202ENST00000396340 NDUFC2-KCTD14E9PQ53 114 aa12.12□□□□□ -0.47
CDKN1B-202ENST00000396340 H3BRM9 83 aa12.12□□□□□ -0.47
CDKN1B-202ENST00000396340 PDZD11Q5EBL8 140 aa12.12□□□□□ -0.47
CDKN1B-202ENST00000396340 UNQ6190/PRO20217Q6UXQ8 127 aa12.12□□□□□ -0.47
CDKN1B-202ENST00000396340 C18orf32Q8TCD1 76 aa12.12□□□□□ -0.47
CDKN1B-202ENST00000396340 ATP5LO75964 103 aa12.11□□□□□ -0.47
CDKN1B-202ENST00000396340 HBDP02042 147 aa12.11□□□□□ -0.47
CDKN1B-202ENST00000396340 PRR3P79522 188 aaKnown RBP12.11□□□□□ -0.47
CDKN1B-202ENST00000396340 C9orf116Q5BN46 136 aaPredicted RBP12.11□□□□□ -0.47
CDKN1B-202ENST00000396340 LINC00469Q8N7U9 141 aa12.11□□□□□ -0.47
CDKN1B-202ENST00000396340 CST9LQ9H4G1 147 aa12.11□□□□□ -0.47
CDKN1B-202ENST00000396340 TOMM7Q9P0U1 55 aa12.11□□□□□ -0.47
CDKN1B-202ENST00000396340 CDKN2A-AS1Q9UH64 79 aa12.11□□□□□ -0.47
CDKN1B-202ENST00000396340 IGLV5-45A0A087WSX0 123 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms