RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 MUC4Q99102 2169 aa3.84□□□□□ -1.79
VPS41-203ENST00000395969 TRBV10-1A0A0K0K1A3 114 aa3.84□□□□□ -1.79
VPS41-203ENST00000395969 IGHV3-11P01762 117 aa3.84□□□□□ -1.79
VPS41-203ENST00000395969 TRACP01848 142 aa3.84□□□□□ -1.79
VPS41-203ENST00000395969 KRTAP10-3P60369 221 aa3.84□□□□□ -1.79
VPS41-203ENST00000395969 TMEM61Q8N0U2 210 aa3.84□□□□□ -1.79
VPS41-203ENST00000395969 PRR26Q8N8Z3 221 aa3.84□□□□□ -1.79
VPS41-203ENST00000395969 DAND5Q8N907 189 aa3.84□□□□□ -1.79
VPS41-203ENST00000395969 OPRPNQ99935 248 aaPredicted RBP3.84□□□□□ -1.79
VPS41-203ENST00000395969 A0A087WVE0 104 aa3.84□□□□□ -1.79
VPS41-203ENST00000395969 RBMY1A1P0DJD3 496 aaKnown RBP3.84□□□□□ -1.79
VPS41-203ENST00000395969 RBMY1CP0DJD4 496 aa3.84□□□□□ -1.79
VPS41-203ENST00000395969 CD28P10747 220 aa3.84□□□□□ -1.79
VPS41-203ENST00000395969 SLURP1P55000 103 aa3.84□□□□□ -1.79
VPS41-203ENST00000395969 RBMY1FQ15415 496 aaKnown RBP3.84□□□□□ -1.79
VPS41-203ENST00000395969 MIAQ16674 131 aa3.84□□□□□ -1.79
VPS41-203ENST00000395969 ADAMTSL4-AS1Q5T5F5 129 aa3.84□□□□□ -1.79
VPS41-203ENST00000395969 SUMO4Q6EEV6 95 aa3.84□□□□□ -1.79
VPS41-203ENST00000395969 CELSR1Q9NYQ6 3014 aa3.84□□□□□ -1.8
VPS41-203ENST00000395969 NCOR2Q9Y618 2525 aa3.84□□□□□ -1.8
VPS41-203ENST00000395969 SPG11Q96JI7 2443 aa3.84□□□□□ -1.8
VPS41-203ENST00000395969 FAM236DA0A1B0GTK5 79 aa3.84□□□□□ -1.8
VPS41-203ENST00000395969 PLAC8L1A1L4L8 177 aa3.84□□□□□ -1.8
VPS41-203ENST00000395969 IGHV3-30-3P0DP02 117 aa3.84□□□□□ -1.8
VPS41-203ENST00000395969 FAM236CP0DP71 79 aa3.84□□□□□ -1.8
VPS41-203ENST00000395969 S100A4P26447 101 aaKnown RBP3.84□□□□□ -1.8
VPS41-203ENST00000395969 MRPS36P82909 103 aaKnown RBP3.84□□□□□ -1.8
VPS41-203ENST00000395969 EGFEM1PQ0D2K5 195 aa3.84□□□□□ -1.8
VPS41-203ENST00000395969 APCP25054 2843 aa3.83□□□□□ -1.8
VPS41-203ENST00000395969 TENM4Q6N022 2769 aa3.83□□□□□ -1.8
VPS41-203ENST00000395969 INSP01308 110 aa3.83□□□□□ -1.8
VPS41-203ENST00000395969 IGHV3-53P01767 116 aa3.83□□□□□ -1.8
VPS41-203ENST00000395969 LINC00336Q6ZUF6 198 aa3.83□□□□□ -1.8
VPS41-203ENST00000395969 DPH3Q96FX2 82 aa3.83□□□□□ -1.8
VPS41-203ENST00000395969 JPT2Q9H910 190 aa3.83□□□□□ -1.8
VPS41-203ENST00000395969 C18orf65Q6ZTR6 163 aa3.83□□□□□ -1.8
VPS41-203ENST00000395969 Q9H8V8 135 aa3.83□□□□□ -1.8
VPS41-203ENST00000395969 C22orf24Q9Y442 160 aa3.83□□□□□ -1.8
VPS41-203ENST00000395969 ATRXP46100 2492 aa3.83□□□□□ -1.8
VPS41-203ENST00000395969 IGKV3-7A0A075B6H7 116 aa3.82□□□□□ -1.8
VPS41-203ENST00000395969 TINCRA0A1B0GVN0 87 aa3.82□□□□□ -1.8
VPS41-203ENST00000395969 ATOX1O00244 68 aa3.82□□□□□ -1.8
VPS41-203ENST00000395969 GNRH2O43555 120 aa3.82□□□□□ -1.8
VPS41-203ENST00000395969 TIMM17BO60830 172 aa3.82□□□□□ -1.8
VPS41-203ENST00000395969 TMEM258P61165 79 aa3.82□□□□□ -1.8
VPS41-203ENST00000395969 FAM104AQ969W3 186 aa3.82□□□□□ -1.8
VPS41-203ENST00000395969 UPK3BQ9BT76 320 aa3.82□□□□□ -1.8
VPS41-203ENST00000395969 IGLV4-3A0A075B6K6 122 aa3.82□□□□□ -1.8
VPS41-203ENST00000395969 IGLV5-45A0A087WSX0 123 aa3.82□□□□□ -1.8
VPS41-203ENST00000395969 A0A0J9YXV3 536 aa3.82□□□□□ -1.8
VPS41-203ENST00000395969 RNASE13Q5GAN3 156 aaKnown RBP3.82□□□□□ -1.8
VPS41-203ENST00000395969 C1orf158Q8N1D5 194 aa3.82□□□□□ -1.8
VPS41-203ENST00000395969 C16orf74Q96GX8 76 aa3.82□□□□□ -1.8
VPS41-203ENST00000395969 ZNF625Q96I27 306 aaPredicted RBP3.82□□□□□ -1.8
VPS41-203ENST00000395969 ZFHX3Q15911 3703 aa3.82□□□□□ -1.8
VPS41-203ENST00000395969 UTP20O75691 2785 aaKnown RBP3.82□□□□□ -1.8
VPS41-203ENST00000395969 IGHV1-58A0A0C4DH39 117 aa3.81□□□□□ -1.8
VPS41-203ENST00000395969 DEFB1P60022 68 aa3.81□□□□□ -1.8
VPS41-203ENST00000395969 C9orf66Q5T8R8 295 aa3.81□□□□□ -1.8
VPS41-203ENST00000395969 Q5XG85 94 aa3.81□□□□□ -1.8
VPS41-203ENST00000395969 CD164L2Q6UWJ8 174 aa3.81□□□□□ -1.8
VPS41-203ENST00000395969 C20orf203Q8NBC4 194 aa3.81□□□□□ -1.8
VPS41-203ENST00000395969 BRK1Q8WUW1 75 aa3.81□□□□□ -1.8
VPS41-203ENST00000395969 COX7A2LO14548 114 aa3.81□□□□□ -1.8
VPS41-203ENST00000395969 MAPK1IP1LQ8NDC0 245 aa3.81□□□□□ -1.8
VPS41-203ENST00000395969 FAM222AQ5U5X8 452 aa3.81□□□□□ -1.8
VPS41-203ENST00000395969 DAZ4Q86SG3 579 aaKnown RBP3.81□□□□□ -1.8
VPS41-203ENST00000395969 C11orf45Q8TAV5 145 aa3.81□□□□□ -1.8
VPS41-203ENST00000395969 DAZ3Q9NR90 486 aaKnown RBP3.81□□□□□ -1.8
VPS41-203ENST00000395969 ZNF469Q96JG9 3925 aaPredicted RBP3.8□□□□□ -1.8
VPS41-203ENST00000395969 PFN2P35080 140 aa3.8□□□□□ -1.8
VPS41-203ENST00000395969 FAM74A4Q5TZK3 123 aa3.8□□□□□ -1.8
VPS41-203ENST00000395969 MRAPQ8TCY5 172 aa3.8□□□□□ -1.8
VPS41-203ENST00000395969 VSIG2Q96IQ7 327 aa3.8□□□□□ -1.8
VPS41-203ENST00000395969 NDUFA12Q9UI09 145 aa3.8□□□□□ -1.8
VPS41-203ENST00000395969 ANKRD17O75179 2603 aaKnown RBP3.8□□□□□ -1.8
VPS41-203ENST00000395969 TRBV6-4A0A1B0GX49 114 aa3.8□□□□□ -1.8
VPS41-203ENST00000395969 RPL18AQ02543 176 aaKnown RBP3.8□□□□□ -1.8
VPS41-203ENST00000395969 KPRPQ5T749 579 aaPredicted RBP3.8□□□□□ -1.8
VPS41-203ENST00000395969 SETD2Q9BYW2 2564 aaPredicted RBP3.8□□□□□ -1.8
VPS41-203ENST00000395969 FLNCQ14315 2725 aa3.8□□□□□ -1.8
VPS41-203ENST00000395969 F6UB75 175 aa3.79□□□□□ -1.8
VPS41-203ENST00000395969 H3BNG1 76 aa3.79□□□□□ -1.8
VPS41-203ENST00000395969 DEFB131AP59861 70 aa3.79□□□□□ -1.8
VPS41-203ENST00000395969 S100A7L2Q5SY68 101 aa3.79□□□□□ -1.8
VPS41-203ENST00000395969 SERP2Q8N6R1 65 aa3.79□□□□□ -1.8
VPS41-203ENST00000395969 DYNLRB2Q8TF09 96 aa3.79□□□□□ -1.8
VPS41-203ENST00000395969 Q9HAA7 133 aa3.79□□□□□ -1.8
VPS41-203ENST00000395969 INAFM2P0DMQ5 153 aa3.78□□□□□ -1.8
VPS41-203ENST00000395969 MYO18BQ8IUG5 2567 aa3.78□□□□□ -1.8
VPS41-203ENST00000395969 CHD8Q9HCK8 2581 aa3.78□□□□□ -1.8
VPS41-203ENST00000395969 ZNF462Q96JM2 2506 aa3.78□□□□□ -1.8
VPS41-203ENST00000395969 LYRM9A8MSI8 78 aa3.78□□□□□ -1.8
VPS41-203ENST00000395969 NDUFA1O15239 70 aa3.78□□□□□ -1.8
VPS41-203ENST00000395969 BAALC-AS2P0C853 105 aa3.78□□□□□ -1.8
VPS41-203ENST00000395969 C20orf197Q8N268 126 aa3.78□□□□□ -1.8
VPS41-203ENST00000395969 CSMD2Q7Z408 3487 aa3.78□□□□□ -1.8
VPS41-203ENST00000395969 Q6JHZ5 121 aa3.77□□□□□ -1.81
VPS41-203ENST00000395969 CHCHD7Q9BUK0 85 aa3.77□□□□□ -1.81
VPS41-203ENST00000395969 CSPG4Q6UVK1 2322 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms