RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 HERV-K104P63124 156 aa13.95□□□□□ -0.18
RCCD1-201ENST00000394258 LOC100131303A0A0U1RQF7 123 aa13.94□□□□□ -0.18
RCCD1-201ENST00000394258 ZNF625Q96I27 306 aaPredicted RBP13.94□□□□□ -0.18
RCCD1-201ENST00000394258 TMEM101Q96IK0 257 aa13.94□□□□□ -0.18
RCCD1-201ENST00000394258 A0A0U1RRA0 63 aa13.94□□□□□ -0.18
RCCD1-201ENST00000394258 IGLV1-51P01701 117 aa13.94□□□□□ -0.18
RCCD1-201ENST00000394258 C16orf95Q9H693 158 aa13.94□□□□□ -0.18
RCCD1-201ENST00000394258 MIAQ16674 131 aa13.93□□□□□ -0.18
RCCD1-201ENST00000394258 LINC00242Q5T6M2 205 aa13.93□□□□□ -0.18
RCCD1-201ENST00000394258 C19orf73Q9NVV2 129 aa13.93□□□□□ -0.18
RCCD1-201ENST00000394258 GCN1Q92616 2671 aaKnown RBP13.93□□□□□ -0.18
RCCD1-201ENST00000394258 ATXN8Q156A1 80 aa13.92□□□□□ -0.18
RCCD1-201ENST00000394258 PLAC8L1A1L4L8 177 aa13.92□□□□□ -0.18
RCCD1-201ENST00000394258 SPANXDQ9BXN6 97 aa13.92□□□□□ -0.18
RCCD1-201ENST00000394258 SPANXCQ9NY87 97 aa13.92□□□□□ -0.18
RCCD1-201ENST00000394258 CLEC2BQ92478 149 aa13.91□□□□□ -0.18
RCCD1-201ENST00000394258 TRBV10-1A0A0K0K1A3 114 aa13.9□□□□□ -0.18
RCCD1-201ENST00000394258 J3QKU1 62 aa13.9□□□□□ -0.18
RCCD1-201ENST00000394258 C2orf82Q6UX34 121 aa13.9□□□□□ -0.18
RCCD1-201ENST00000394258 DAZ2Q13117 558 aaKnown RBP13.9□□□□□ -0.18
RCCD1-201ENST00000394258 DAZ4Q86SG3 579 aaKnown RBP13.9□□□□□ -0.18
RCCD1-201ENST00000394258 DAZ3Q9NR90 486 aaKnown RBP13.9□□□□□ -0.18
RCCD1-201ENST00000394258 TIRAPP58753 221 aa13.89□□□□□ -0.19
RCCD1-201ENST00000394258 UBE2WQ96B02 151 aa13.88□□□□□ -0.19
RCCD1-201ENST00000394258 C16orf74Q96GX8 76 aa13.88□□□□□ -0.19
RCCD1-201ENST00000394258 CHCHD5Q9BSY4 110 aa13.88□□□□□ -0.19
RCCD1-201ENST00000394258 VWFP04275 2813 aa13.88□□□□□ -0.19
RCCD1-201ENST00000394258 HILS1P60008 231 aa13.88□□□□□ -0.19
RCCD1-201ENST00000394258 Q9H8V8 135 aa13.88□□□□□ -0.19
RCCD1-201ENST00000394258 ICOSQ9Y6W8 199 aa13.88□□□□□ -0.19
RCCD1-201ENST00000394258 IGLV5-45A0A087WSX0 123 aa13.87□□□□□ -0.19
RCCD1-201ENST00000394258 TRGV4A0A0C4DH28 118 aa13.87□□□□□ -0.19
RCCD1-201ENST00000394258 TRBV30A0A0K0K1B3 111 aa13.87□□□□□ -0.19
RCCD1-201ENST00000394258 TRBV10-2A0A0K0K1G8 114 aa13.87□□□□□ -0.19
RCCD1-201ENST00000394258 H7C423 109 aa13.87□□□□□ -0.19
RCCD1-201ENST00000394258 HERVK_113P63121 156 aa13.87□□□□□ -0.19
RCCD1-201ENST00000394258 CSNK1G2-AS1Q8NCQ2 148 aa13.87□□□□□ -0.19
RCCD1-201ENST00000394258 IGKV3OR2-268A0A0C4DH90 116 aa13.87□□□□□ -0.19
RCCD1-201ENST00000394258 CMC4P56277 68 aaPredicted RBP13.87□□□□□ -0.19
RCCD1-201ENST00000394258 FAM110AQ9BQ89 295 aa13.87□□□□□ -0.19
RCCD1-201ENST00000394258 UBE2L6O14933 153 aa13.86□□□□□ -0.19
RCCD1-201ENST00000394258 MEIG1Q5JSS6 88 aa13.86□□□□□ -0.19
RCCD1-201ENST00000394258 CDC42SE2Q9NRR3 84 aa13.86□□□□□ -0.19
RCCD1-201ENST00000394258 NDUFA1O15239 70 aa13.86□□□□□ -0.19
RCCD1-201ENST00000394258 KRTAP10-3P60369 221 aa13.85□□□□□ -0.19
RCCD1-201ENST00000394258 TMEM243Q9BU79 118 aa13.84□□□□□ -0.19
RCCD1-201ENST00000394258 SMIM1B2RUZ4 78 aa13.84□□□□□ -0.19
RCCD1-201ENST00000394258 RPL13AP40429 203 aaKnown RBP13.84□□□□□ -0.19
RCCD1-201ENST00000394258 DEFB130BP0DP73 79 aa13.83□□□□□ -0.2
RCCD1-201ENST00000394258 DEFB130AP0DP74 79 aa13.83□□□□□ -0.2
RCCD1-201ENST00000394258 IGLV5-39A0A0G2JS06 123 aa13.83□□□□□ -0.2
RCCD1-201ENST00000394258 PF4P02776 101 aa13.83□□□□□ -0.2
RCCD1-201ENST00000394258 CSDC2Q9Y534 153 aaKnown RBP13.82□□□□□ -0.2
RCCD1-201ENST00000394258 KMT2BQ9UMN6 2715 aaPredicted RBP13.81□□□□□ -0.2
RCCD1-201ENST00000394258 M0QXV9 152 aa13.8□□□□□ -0.2
RCCD1-201ENST00000394258 CIRBPQ14011 172 aaKnown RBP13.8□□□□□ -0.2
RCCD1-201ENST00000394258 SOSTDC1Q6X4U4 206 aa13.8□□□□□ -0.2
RCCD1-201ENST00000394258 PRIMA1Q86XR5 153 aa13.8□□□□□ -0.2
RCCD1-201ENST00000394258 LINC00308Q8TCZ7 52 aa13.8□□□□□ -0.2
RCCD1-201ENST00000394258 OTOGQ6ZRI0 2925 aa13.8□□□□□ -0.2
RCCD1-201ENST00000394258 TIMM17BO60830 172 aa13.8□□□□□ -0.2
RCCD1-201ENST00000394258 TRBV6-4A0A1B0GX49 114 aa13.79□□□□□ -0.2
RCCD1-201ENST00000394258 OVOL2Q9BRP0 275 aa13.79□□□□□ -0.2
RCCD1-201ENST00000394258 FHL2Q14192 279 aa13.79□□□□□ -0.2
RCCD1-201ENST00000394258 F5H768 121 aa13.78□□□□□ -0.2
RCCD1-201ENST00000394258 SPATA3Q8NHX4 192 aa13.78□□□□□ -0.2
RCCD1-201ENST00000394258 Q6Q795 121 aa13.77□□□□□ -0.2
RCCD1-201ENST00000394258 IGLV4-60A0A075B6I1 120 aa13.77□□□□□ -0.21
RCCD1-201ENST00000394258 COX6CP09669 75 aa13.76□□□□□ -0.21
RCCD1-201ENST00000394258 TENM1Q9UKZ4 2725 aa13.76□□□□□ -0.21
RCCD1-201ENST00000394258 LY6G6DO95868 133 aa13.76□□□□□ -0.21
RCCD1-201ENST00000394258 FAM19A3Q7Z5A8 133 aa13.75□□□□□ -0.21
RCCD1-201ENST00000394258 TOMM7Q9P0U1 55 aa13.75□□□□□ -0.21
RCCD1-201ENST00000394258 TRBV6-8A0A0A6YYG3 113 aa13.74□□□□□ -0.21
RCCD1-201ENST00000394258 LINC00482Q8N8I6 264 aa13.74□□□□□ -0.21
RCCD1-201ENST00000394258 LST1O00453 97 aa13.73□□□□□ -0.21
RCCD1-201ENST00000394258 ATRQ13535 2644 aa13.72□□□□□ -0.21
RCCD1-201ENST00000394258 A0A096LPF7 62 aa13.72□□□□□ -0.21
RCCD1-201ENST00000394258 FAM236AA0A1B0GUQ0 79 aa13.71□□□□□ -0.21
RCCD1-201ENST00000394258 FAM236BA0A1B0GV22 79 aa13.71□□□□□ -0.21
RCCD1-201ENST00000394258 DEFB4AO15263 64 aa13.7□□□□□ -0.22
RCCD1-201ENST00000394258 NSD1Q96L73 2696 aaPredicted RBP13.69□□□□□ -0.22
RCCD1-201ENST00000394258 H3BT86 120 aa13.69□□□□□ -0.22
RCCD1-201ENST00000394258 INAFM1C9JVW0 142 aa13.69□□□□□ -0.22
RCCD1-201ENST00000394258 GYPEP15421 78 aa13.69□□□□□ -0.22
RCCD1-201ENST00000394258 PPDPFQ9H3Y8 114 aa13.69□□□□□ -0.22
RCCD1-201ENST00000394258 C5orf38Q86SI9 138 aa13.68□□□□□ -0.22
RCCD1-201ENST00000394258 LINC01600Q96MT4 127 aa13.67□□□□□ -0.22
RCCD1-201ENST00000394258 COX7B2Q8TF08 81 aa13.67□□□□□ -0.22
RCCD1-201ENST00000394258 X6R8D5 127 aa13.67□□□□□ -0.22
RCCD1-201ENST00000394258 SMCR5Q8TEV8 140 aa13.66□□□□□ -0.22
RCCD1-201ENST00000394258 CLPSL2Q6UWE3 100 aa13.66□□□□□ -0.22
RCCD1-201ENST00000394258 C11orf68Q9H3H3 251 aaKnown RBP13.65□□□□□ -0.22
RCCD1-201ENST00000394258 IGHV3OR16-9A0A0B4J2B5 98 aa13.64□□□□□ -0.23
RCCD1-201ENST00000394258 DEFB135Q30KP9 77 aa13.64□□□□□ -0.23
RCCD1-201ENST00000394258 FAM222AQ5U5X8 452 aa13.64□□□□□ -0.23
RCCD1-201ENST00000394258 MIR7-3HGQ8N6C7 128 aa13.64□□□□□ -0.23
RCCD1-201ENST00000394258 KIR2DL5BQ8NHK3 375 aa13.64□□□□□ -0.23
RCCD1-201ENST00000394258 COX7A2LO14548 114 aa13.63□□□□□ -0.23
RCCD1-201ENST00000394258 KLK5Q9Y337 293 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms