RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 MT-ND6P03923 174 aa10.71□□□□□ -0.69
SNRPA1-202ENST00000394082 Q6ZUT4 128 aa10.71□□□□□ -0.69
SNRPA1-202ENST00000394082 C5orf38Q86SI9 138 aa10.71□□□□□ -0.69
SNRPA1-202ENST00000394082 SPAG11BQ08648 103 aa10.7□□□□□ -0.7
SNRPA1-202ENST00000394082 MRPL51Q4U2R6 128 aaKnown RBP10.7□□□□□ -0.7
SNRPA1-202ENST00000394082 RNASE13Q5GAN3 156 aaKnown RBP10.7□□□□□ -0.7
SNRPA1-202ENST00000394082 UQCC3Q6UW78 93 aa10.7□□□□□ -0.7
SNRPA1-202ENST00000394082 IMMP2LQ96T52 175 aa10.7□□□□□ -0.7
SNRPA1-202ENST00000394082 IGHV3OR16-9A0A0B4J2B5 98 aa10.69□□□□□ -0.7
SNRPA1-202ENST00000394082 MT-ND4LP03901 98 aa10.69□□□□□ -0.7
SNRPA1-202ENST00000394082 S100A8P05109 93 aa10.69□□□□□ -0.7
SNRPA1-202ENST00000394082 TLX1NBP0CAT3 122 aa10.69□□□□□ -0.7
SNRPA1-202ENST00000394082 MRPS36P82909 103 aaKnown RBP10.69□□□□□ -0.7
SNRPA1-202ENST00000394082 RPL18AQ02543 176 aaKnown RBP10.69□□□□□ -0.7
SNRPA1-202ENST00000394082 SPANXA1Q9NS26 97 aa10.69□□□□□ -0.7
SNRPA1-202ENST00000394082 FAM104AQ969W3 186 aa10.68□□□□□ -0.7
SNRPA1-202ENST00000394082 C1orf137Q5JT78 98 aa10.67□□□□□ -0.7
SNRPA1-202ENST00000394082 MRPL54Q6P161 138 aaKnown RBP10.67□□□□□ -0.7
SNRPA1-202ENST00000394082 ANAPC16Q96DE5 110 aa10.67□□□□□ -0.7
SNRPA1-202ENST00000394082 OPRPNQ99935 248 aaPredicted RBP10.67□□□□□ -0.7
SNRPA1-202ENST00000394082 NDUFA1O15239 70 aa10.66□□□□□ -0.7
SNRPA1-202ENST00000394082 CKS2P33552 79 aa10.66□□□□□ -0.7
SNRPA1-202ENST00000394082 HBBP68871 147 aa10.66□□□□□ -0.7
SNRPA1-202ENST00000394082 PHF5AQ7RTV0 110 aaKnown RBP10.66□□□□□ -0.7
SNRPA1-202ENST00000394082 COMMD7Q86VX2 200 aa10.66□□□□□ -0.7
SNRPA1-202ENST00000394082 DIRC1Q969H9 104 aa10.66□□□□□ -0.7
SNRPA1-202ENST00000394082 F8W036 122 aa10.65□□□□□ -0.7
SNRPA1-202ENST00000394082 TNFRSF6BO95407 300 aa10.65□□□□□ -0.7
SNRPA1-202ENST00000394082 IGLV7-43P04211 117 aa10.65□□□□□ -0.7
SNRPA1-202ENST00000394082 ORAOV1Q8WV07 137 aa10.65□□□□□ -0.7
SNRPA1-202ENST00000394082 SMIM2Q9BVW6 85 aa10.65□□□□□ -0.7
SNRPA1-202ENST00000394082 TMEM218A2RU14 115 aa10.64□□□□□ -0.71
SNRPA1-202ENST00000394082 PPBPP02775 128 aa10.64□□□□□ -0.71
SNRPA1-202ENST00000394082 RPL39P62891 51 aaKnown RBP10.64□□□□□ -0.71
SNRPA1-202ENST00000394082 ATP5L2Q7Z4Y8 100 aa10.64□□□□□ -0.71
SNRPA1-202ENST00000394082 A0A1B0GXF2 115 aa10.62□□□□□ -0.71
SNRPA1-202ENST00000394082 H0Y9J4 135 aa10.61□□□□□ -0.71
SNRPA1-202ENST00000394082 ADCYAP1P18509 176 aa10.61□□□□□ -0.71
SNRPA1-202ENST00000394082 PYGO1Q9Y3Y4 419 aa10.61□□□□□ -0.71
SNRPA1-202ENST00000394082 LPAP08519 4548 aa10.6□□□□□ -0.71
SNRPA1-202ENST00000394082 A0A087WZ39 114 aa10.6□□□□□ -0.71
SNRPA1-202ENST00000394082 IFITM10A6NMD0 228 aa10.6□□□□□ -0.71
SNRPA1-202ENST00000394082 D6R8Y8 96 aa10.6□□□□□ -0.71
SNRPA1-202ENST00000394082 C10orf25Q5T742 122 aa10.6□□□□□ -0.71
SNRPA1-202ENST00000394082 UNQ6190/PRO20217Q6UXQ8 127 aa10.6□□□□□ -0.71
SNRPA1-202ENST00000394082 SEC11CQ9BY50 192 aa10.6□□□□□ -0.71
SNRPA1-202ENST00000394082 C6orf48Q9UBA6 75 aa10.6□□□□□ -0.71
SNRPA1-202ENST00000394082 IGLV1-50A0A075B6I6 118 aa10.59□□□□□ -0.71
SNRPA1-202ENST00000394082 TGIF2-C20orf24A0A0A6YYL0 155 aa10.59□□□□□ -0.71
SNRPA1-202ENST00000394082 KIAA0087Q14695 138 aa10.59□□□□□ -0.71
SNRPA1-202ENST00000394082 TRBV30A0A0K0K1B3 111 aa10.58□□□□□ -0.72
SNRPA1-202ENST00000394082 FAM168BA1KXE4 195 aa10.58□□□□□ -0.72
SNRPA1-202ENST00000394082 NPYP01303 97 aa10.58□□□□□ -0.72
SNRPA1-202ENST00000394082 IFI27P40305 119 aaPredicted RBP10.58□□□□□ -0.72
SNRPA1-202ENST00000394082 LINC01561Q8N1V8 128 aa10.58□□□□□ -0.72
SNRPA1-202ENST00000394082 PRR26Q8N8Z3 221 aa10.58□□□□□ -0.72
SNRPA1-202ENST00000394082 CTDSP1Q9GZU7 261 aa10.58□□□□□ -0.72
SNRPA1-202ENST00000394082 KRTAP11-1Q8IUC1 163 aa10.57□□□□□ -0.72
SNRPA1-202ENST00000394082 PRSS47A8MTI9 375 aa10.56□□□□□ -0.72
SNRPA1-202ENST00000394082 RAB5AP20339 215 aa10.56□□□□□ -0.72
SNRPA1-202ENST00000394082 LINC00242Q5T6M2 205 aa10.56□□□□□ -0.72
SNRPA1-202ENST00000394082 ORMDL3Q8N138 153 aa10.56□□□□□ -0.72
SNRPA1-202ENST00000394082 NDUFC2-KCTD14E9PQ53 114 aa10.55□□□□□ -0.72
SNRPA1-202ENST00000394082 KRTAP1-4P0C5Y4 121 aa10.55□□□□□ -0.72
SNRPA1-202ENST00000394082 FAM19A5Q7Z5A7 132 aaPredicted RBP10.55□□□□□ -0.72
SNRPA1-202ENST00000394082 KRTAP7-1Q8IUC3 87 aa10.55□□□□□ -0.72
SNRPA1-202ENST00000394082 GAGE2EQ4V326 116 aa10.54□□□□□ -0.72
SNRPA1-202ENST00000394082 TMEM141Q96I45 108 aa10.54□□□□□ -0.72
SNRPA1-202ENST00000394082 GAGE2DQ9UEU5 116 aa10.54□□□□□ -0.72
SNRPA1-202ENST00000394082 LAMTOR2Q9Y2Q5 125 aa10.54□□□□□ -0.72
SNRPA1-202ENST00000394082 IGLV4-3A0A075B6K6 122 aa10.53□□□□□ -0.72
SNRPA1-202ENST00000394082 M0QXV9 152 aa10.53□□□□□ -0.72
SNRPA1-202ENST00000394082 S100PP25815 95 aa10.53□□□□□ -0.72
SNRPA1-202ENST00000394082 TMEM136Q6ZRR5 245 aa10.53□□□□□ -0.72
SNRPA1-202ENST00000394082 PRELID3AQ96N28 172 aa10.53□□□□□ -0.72
SNRPA1-202ENST00000394082 TRAV9-1A0A075B6T8 112 aa10.52□□□□□ -0.73
SNRPA1-202ENST00000394082 NPSP0C0P6 89 aa10.52□□□□□ -0.73
SNRPA1-202ENST00000394082 RPL13AP40429 203 aaKnown RBP10.52□□□□□ -0.73
SNRPA1-202ENST00000394082 PACRGQ96M98 296 aaPredicted RBP10.52□□□□□ -0.73
SNRPA1-202ENST00000394082 CARHSP1Q9Y2V2 147 aaKnown RBP10.52□□□□□ -0.73
SNRPA1-202ENST00000394082 UBE2D1P51668 147 aa10.51□□□□□ -0.73
SNRPA1-202ENST00000394082 UBE2BP63146 152 aa10.51□□□□□ -0.73
SNRPA1-202ENST00000394082 RHEBQ15382 184 aa10.51□□□□□ -0.73
SNRPA1-202ENST00000394082 C10orf91Q5T1B1 145 aa10.51□□□□□ -0.73
SNRPA1-202ENST00000394082 TEX43Q6ZNM6 134 aa10.51□□□□□ -0.73
SNRPA1-202ENST00000394082 NDUFA5Q16718 116 aa10.5□□□□□ -0.73
SNRPA1-202ENST00000394082 C9orf129Q5T035 196 aaKnown RBP10.5□□□□□ -0.73
SNRPA1-202ENST00000394082 C2orf88Q9BSF0 95 aa10.5□□□□□ -0.73
SNRPA1-202ENST00000394082 C2orf82Q6UX34 121 aa10.49□□□□□ -0.73
SNRPA1-202ENST00000394082 MAP1LC3AQ9H492 121 aa10.49□□□□□ -0.73
SNRPA1-202ENST00000394082 RPS10P5Q9NQ39 176 aa10.49□□□□□ -0.73
SNRPA1-202ENST00000394082 K7EMI3 77 aa10.48□□□□□ -0.73
SNRPA1-202ENST00000394082 FAM19A3Q7Z5A8 133 aa10.48□□□□□ -0.73
SNRPA1-202ENST00000394082 AMELXQ99217 191 aa10.48□□□□□ -0.73
SNRPA1-202ENST00000394082 CYSLTR1Q9Y271 337 aa10.48□□□□□ -0.73
SNRPA1-202ENST00000394082 Q6ZN92 141 aa10.47□□□□□ -0.73
SNRPA1-202ENST00000394082 LOC389332A0A1B0GUA5 103 aa10.46□□□□□ -0.73
SNRPA1-202ENST00000394082 NUPR1O60356 82 aa10.46□□□□□ -0.73
SNRPA1-202ENST00000394082 ZNF861PO60384 105 aa10.46□□□□□ -0.73
SNRPA1-202ENST00000394082 APOC3P02656 99 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms