RNA–Protein interactions for RNA: ENST00000393965.7

CCDC142-202, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC142, Length 3,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-202ENST00000393965 ATRQ13535 2644 aa9.83□□□□□ -0.84
CCDC142-202ENST00000393965 IGHV1-58A0A0C4DH39 117 aa9.83□□□□□ -0.84
CCDC142-202ENST00000393965 GIG44P09565 113 aaPredicted RBP9.83□□□□□ -0.84
CCDC142-202ENST00000393965 TMEM86BQ8N661 226 aa9.83□□□□□ -0.84
CCDC142-202ENST00000393965 CHCHD5Q9BSY4 110 aa9.83□□□□□ -0.84
CCDC142-202ENST00000393965 HIVEP1P15822 2718 aa9.82□□□□□ -0.84
CCDC142-202ENST00000393965 KRTAP10-3P60369 221 aa9.82□□□□□ -0.84
CCDC142-202ENST00000393965 GAGE6Q13070 117 aa9.82□□□□□ -0.84
CCDC142-202ENST00000393965 H7C423 109 aa9.82□□□□□ -0.84
CCDC142-202ENST00000393965 VSIG2Q96IQ7 327 aa9.81□□□□□ -0.84
CCDC142-202ENST00000393965 TMEM262E9PQX1 116 aa9.81□□□□□ -0.84
CCDC142-202ENST00000393965 UBE2L6O14933 153 aa9.81□□□□□ -0.84
CCDC142-202ENST00000393965 DEFB130BP0DP73 79 aa9.81□□□□□ -0.84
CCDC142-202ENST00000393965 DEFB130AP0DP74 79 aa9.81□□□□□ -0.84
CCDC142-202ENST00000393965 SCGB1A1P11684 91 aa9.81□□□□□ -0.84
CCDC142-202ENST00000393965 CIRBPQ14011 172 aaKnown RBP9.81□□□□□ -0.84
CCDC142-202ENST00000393965 TMEM101Q96IK0 257 aa9.81□□□□□ -0.84
CCDC142-202ENST00000393965 MRPL23Q16540 153 aaKnown RBP9.8□□□□□ -0.84
CCDC142-202ENST00000393965 LY6G6DO95868 133 aa9.8□□□□□ -0.84
CCDC142-202ENST00000393965 TEP1Q99973 2627 aaKnown RBP9.8□□□□□ -0.84
CCDC142-202ENST00000393965 INAFM1C9JVW0 142 aa9.79□□□□□ -0.84
CCDC142-202ENST00000393965 LINC00158P58513 81 aa9.79□□□□□ -0.84
CCDC142-202ENST00000393965 C5orf38Q86SI9 138 aa9.79□□□□□ -0.84
CCDC142-202ENST00000393965 UBE2D4Q9Y2X8 147 aa9.79□□□□□ -0.84
CCDC142-202ENST00000393965 ATP5G1P05496 136 aa9.79□□□□□ -0.84
CCDC142-202ENST00000393965 ATP6V0E2Q8NHE4 81 aa9.79□□□□□ -0.84
CCDC142-202ENST00000393965 NSD1Q96L73 2696 aaPredicted RBP9.79□□□□□ -0.84
CCDC142-202ENST00000393965 TRBV10-2A0A0K0K1G8 114 aa9.78□□□□□ -0.84
CCDC142-202ENST00000393965 BEAN1Q3B7T3 259 aa9.78□□□□□ -0.84
CCDC142-202ENST00000393965 GAGE2AQ6NT46 116 aa9.78□□□□□ -0.84
CCDC142-202ENST00000393965 IFITM1P13164 125 aa9.78□□□□□ -0.84
CCDC142-202ENST00000393965 MIAQ16674 131 aa9.78□□□□□ -0.84
CCDC142-202ENST00000393965 SHISA2Q6UWI4 295 aa9.78□□□□□ -0.84
CCDC142-202ENST00000393965 C19orf73Q9NVV2 129 aa9.77□□□□□ -0.85
CCDC142-202ENST00000393965 A0A0B4J2C4 111 aa9.77□□□□□ -0.85
CCDC142-202ENST00000393965 NDUFV3P56181 108 aaKnown RBP9.77□□□□□ -0.85
CCDC142-202ENST00000393965 IL17DQ8TAD2 202 aa9.76□□□□□ -0.85
CCDC142-202ENST00000393965 EDA2RQ9HAV5 297 aa9.76□□□□□ -0.85
CCDC142-202ENST00000393965 PLAC8L1A1L4L8 177 aa9.76□□□□□ -0.85
CCDC142-202ENST00000393965 DEFB4AO15263 64 aa9.76□□□□□ -0.85
CCDC142-202ENST00000393965 NTM-AS1Q6ZSK4 140 aa9.76□□□□□ -0.85
CCDC142-202ENST00000393965 SLPIP03973 132 aa9.75□□□□□ -0.85
CCDC142-202ENST00000393965 MRPS36P82909 103 aaKnown RBP9.75□□□□□ -0.85
CCDC142-202ENST00000393965 LITAFQ99732 161 aa9.75□□□□□ -0.85
CCDC142-202ENST00000393965 F8P00451 2351 aa9.75□□□□□ -0.85
CCDC142-202ENST00000393965 TRGV4A0A0C4DH28 118 aa9.75□□□□□ -0.85
CCDC142-202ENST00000393965 RPL36AP83881 106 aaKnown RBP9.75□□□□□ -0.85
CCDC142-202ENST00000393965 RPL36ALQ969Q0 106 aaKnown RBP9.75□□□□□ -0.85
CCDC142-202ENST00000393965 TINCRA0A1B0GVN0 87 aa9.74□□□□□ -0.85
CCDC142-202ENST00000393965 LINC00308Q8TCZ7 52 aa9.74□□□□□ -0.85
CCDC142-202ENST00000393965 HILS1P60008 231 aa9.73□□□□□ -0.85
CCDC142-202ENST00000393965 PAX4O43316 350 aa9.73□□□□□ -0.85
CCDC142-202ENST00000393965 IGLV1-51P01701 117 aa9.73□□□□□ -0.85
CCDC142-202ENST00000393965 LINC00242Q5T6M2 205 aa9.73□□□□□ -0.85
CCDC142-202ENST00000393965 SOSTDC1Q6X4U4 206 aa9.73□□□□□ -0.85
CCDC142-202ENST00000393965 PYGO1Q9Y3Y4 419 aa9.73□□□□□ -0.85
CCDC142-202ENST00000393965 TRAV25A0A0B4J276 109 aa9.73□□□□□ -0.85
CCDC142-202ENST00000393965 FAM236AA0A1B0GUQ0 79 aa9.73□□□□□ -0.85
CCDC142-202ENST00000393965 FAM236BA0A1B0GV22 79 aa9.73□□□□□ -0.85
CCDC142-202ENST00000393965 C16orf95Q9H693 158 aa9.73□□□□□ -0.85
CCDC142-202ENST00000393965 BAALC-AS2P0C853 105 aa9.72□□□□□ -0.85
CCDC142-202ENST00000393965 PF4P02776 101 aa9.72□□□□□ -0.85
CCDC142-202ENST00000393965 MIR7-3HGQ8N6C7 128 aa9.72□□□□□ -0.85
CCDC142-202ENST00000393965 IGLV10-54A0A075B6I4 117 aa9.72□□□□□ -0.85
CCDC142-202ENST00000393965 NHLRC4P0CG21 123 aaPredicted RBP9.71□□□□□ -0.85
CCDC142-202ENST00000393965 XCL1P47992 114 aa9.71□□□□□ -0.85
CCDC142-202ENST00000393965 DAZ2Q13117 558 aaKnown RBP9.71□□□□□ -0.85
CCDC142-202ENST00000393965 DAZ4Q86SG3 579 aaKnown RBP9.71□□□□□ -0.85
CCDC142-202ENST00000393965 DAZ3Q9NR90 486 aaKnown RBP9.71□□□□□ -0.85
CCDC142-202ENST00000393965 TRBV30A0A0K0K1B3 111 aa9.71□□□□□ -0.86
CCDC142-202ENST00000393965 CSNK1G2-AS1Q8NCQ2 148 aa9.71□□□□□ -0.86
CCDC142-202ENST00000393965 IGKV3D-7A0A0C4DH55 119 aa9.7□□□□□ -0.86
CCDC142-202ENST00000393965 SPANXA1Q9NS26 97 aa9.7□□□□□ -0.86
CCDC142-202ENST00000393965 K7EQD1 137 aa9.69□□□□□ -0.86
CCDC142-202ENST00000393965 HTN3P15516 51 aa9.69□□□□□ -0.86
CCDC142-202ENST00000393965 PRR3P79522 188 aaKnown RBP9.69□□□□□ -0.86
CCDC142-202ENST00000393965 DNAL4O96015 105 aa9.69□□□□□ -0.86
CCDC142-202ENST00000393965 FAM218AQ96MZ4 157 aa9.69□□□□□ -0.86
CCDC142-202ENST00000393965 CITED1Q99966 193 aa9.69□□□□□ -0.86
CCDC142-202ENST00000393965 LST1O00453 97 aa9.68□□□□□ -0.86
CCDC142-202ENST00000393965 LINC00526Q96FQ7 95 aa9.68□□□□□ -0.86
CCDC142-202ENST00000393965 C14orf132Q9NPU4 83 aa9.68□□□□□ -0.86
CCDC142-202ENST00000393965 LINC00482Q8N8I6 264 aa9.68□□□□□ -0.86
CCDC142-202ENST00000393965 CRPP02741 224 aa9.67□□□□□ -0.86
CCDC142-202ENST00000393965 SBSPONQ8IVN8 264 aa9.67□□□□□ -0.86
CCDC142-202ENST00000393965 SMIM1B2RUZ4 78 aa9.67□□□□□ -0.86
CCDC142-202ENST00000393965 DNAJC30Q96LL9 226 aa9.67□□□□□ -0.86
CCDC142-202ENST00000393965 ANK2Q01484 3957 aa9.66□□□□□ -0.86
CCDC142-202ENST00000393965 IGLV4-60A0A075B6I1 120 aa9.66□□□□□ -0.86
CCDC142-202ENST00000393965 HERVK_113P63121 156 aa9.66□□□□□ -0.86
CCDC142-202ENST00000393965 CFAP161Q6P656 301 aa9.66□□□□□ -0.86
CCDC142-202ENST00000393965 SND1-IT1Q9HBX3 110 aa9.66□□□□□ -0.86
CCDC142-202ENST00000393965 KLK5Q9Y337 293 aaPredicted RBP9.66□□□□□ -0.86
CCDC142-202ENST00000393965 TMEM243Q9BU79 118 aa9.66□□□□□ -0.86
CCDC142-202ENST00000393965 C6orf226Q5I0X4 101 aa9.65□□□□□ -0.86
CCDC142-202ENST00000393965 SDIM1Q6ZPB5 146 aa9.65□□□□□ -0.86
CCDC142-202ENST00000393965 LECT2O14960 151 aa9.64□□□□□ -0.87
CCDC142-202ENST00000393965 NDUFA1O15239 70 aa9.63□□□□□ -0.87
CCDC142-202ENST00000393965 SPANXDQ9BXN6 97 aa9.63□□□□□ -0.87
CCDC142-202ENST00000393965 SPANXCQ9NY87 97 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms