RNA–Protein interactions for RNA: ENST00000393655.3

TFAP2B-202, Transcript of transcription factor AP-2 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFAP2B, Length 5,773 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2B-202ENST00000393655 SHANK1Q9Y566 2161 aa11.73□□□□□ -0.53
TFAP2B-202ENST00000393655 DSCAMO60469 2012 aa11.73□□□□□ -0.53
TFAP2B-202ENST00000393655 PRM2P04554 102 aa11.72□□□□□ -0.53
TFAP2B-202ENST00000393655 ATP5EP56381 51 aaPredicted RBP11.71□□□□□ -0.53
TFAP2B-202ENST00000393655 CRIP2P52943 208 aaPredicted RBP11.71□□□□□ -0.53
TFAP2B-202ENST00000393655 REG3GQ6UW15 175 aa11.71□□□□□ -0.53
TFAP2B-202ENST00000393655 RNASE8Q8TDE3 154 aaKnown RBP11.71□□□□□ -0.53
TFAP2B-202ENST00000393655 FAM19A3Q7Z5A8 133 aa11.71□□□□□ -0.54
TFAP2B-202ENST00000393655 NDUFV3P56181 108 aaKnown RBP11.7□□□□□ -0.54
TFAP2B-202ENST00000393655 C1orf134Q5TEV5 83 aa11.7□□□□□ -0.54
TFAP2B-202ENST00000393655 MPLKIPQ8TAP9 179 aa11.7□□□□□ -0.54
TFAP2B-202ENST00000393655 NDUFC1O43677 76 aa11.7□□□□□ -0.54
TFAP2B-202ENST00000393655 F8WDY8 70 aa11.69□□□□□ -0.54
TFAP2B-202ENST00000393655 TNCP24821 2201 aa11.69□□□□□ -0.54
TFAP2B-202ENST00000393655 NDUFC2-KCTD14E9PQ53 114 aa11.69□□□□□ -0.54
TFAP2B-202ENST00000393655 NCOA6Q14686 2063 aaPredicted RBP11.69□□□□□ -0.54
TFAP2B-202ENST00000393655 BRI3O95415 125 aa11.68□□□□□ -0.54
TFAP2B-202ENST00000393655 NHLRC4P0CG21 123 aaPredicted RBP11.68□□□□□ -0.54
TFAP2B-202ENST00000393655 CIRBP-AS1Q8TBR5 109 aa11.67□□□□□ -0.54
TFAP2B-202ENST00000393655 LST1O00453 97 aa11.67□□□□□ -0.54
TFAP2B-202ENST00000393655 Q6ZTC4 211 aa11.67□□□□□ -0.54
TFAP2B-202ENST00000393655 C6orf223Q8N319 242 aa11.67□□□□□ -0.54
TFAP2B-202ENST00000393655 Q6ZVQ6 151 aa11.66□□□□□ -0.54
TFAP2B-202ENST00000393655 ZNF580Q9UK33 172 aa11.66□□□□□ -0.54
TFAP2B-202ENST00000393655 MT-ATP8P03928 68 aa11.65□□□□□ -0.54
TFAP2B-202ENST00000393655 UNQ6190/PRO20217Q6UXQ8 127 aa11.65□□□□□ -0.54
TFAP2B-202ENST00000393655 FAM240AA0A1B0GVK7 77 aa11.65□□□□□ -0.54
TFAP2B-202ENST00000393655 MRPS12O15235 138 aaKnown RBP11.65□□□□□ -0.54
TFAP2B-202ENST00000393655 OTOGLQ3ZCN5 2332 aa11.64□□□□□ -0.55
TFAP2B-202ENST00000393655 CNFNQ9BYD5 112 aa11.63□□□□□ -0.55
TFAP2B-202ENST00000393655 EDN2P20800 178 aa11.63□□□□□ -0.55
TFAP2B-202ENST00000393655 FHL2Q14192 279 aa11.63□□□□□ -0.55
TFAP2B-202ENST00000393655 C1orf137Q5JT78 98 aa11.62□□□□□ -0.55
TFAP2B-202ENST00000393655 LINC00242Q5T6M2 205 aa11.62□□□□□ -0.55
TFAP2B-202ENST00000393655 Q6JHZ5 121 aa11.62□□□□□ -0.55
TFAP2B-202ENST00000393655 LINC01556Q5JQF7 62 aa11.62□□□□□ -0.55
TFAP2B-202ENST00000393655 POM121L12Q8N7R1 296 aa11.61□□□□□ -0.55
TFAP2B-202ENST00000393655 FREM1Q5H8C1 2179 aa11.61□□□□□ -0.55
TFAP2B-202ENST00000393655 ESRGQ1W209 222 aa11.61□□□□□ -0.55
TFAP2B-202ENST00000393655 IMUPQ9GZP8 106 aa11.6□□□□□ -0.55
TFAP2B-202ENST00000393655 ANKHD1Q8IWZ3 2542 aaKnown RBP11.6□□□□□ -0.55
TFAP2B-202ENST00000393655 SERP2Q8N6R1 65 aa11.6□□□□□ -0.55
TFAP2B-202ENST00000393655 IGIPA6NJ69 53 aa11.59□□□□□ -0.55
TFAP2B-202ENST00000393655 FAM30AQ9NZY2 134 aa11.59□□□□□ -0.55
TFAP2B-202ENST00000393655 TRBV10-3A0A0K0K1G6 114 aa11.59□□□□□ -0.55
TFAP2B-202ENST00000393655 MED12LQ86YW9 2145 aa11.58□□□□□ -0.56
TFAP2B-202ENST00000393655 C2orf48Q96LS8 159 aa11.58□□□□□ -0.56
TFAP2B-202ENST00000393655 CEP192Q8TEP8 1941 aa11.58□□□□□ -0.56
TFAP2B-202ENST00000393655 NTM-AS1Q6ZSK4 140 aa11.58□□□□□ -0.56
TFAP2B-202ENST00000393655 MUC22E2RYF6 1773 aaPredicted RBP11.58□□□□□ -0.56
TFAP2B-202ENST00000393655 SMIM1B2RUZ4 78 aa11.57□□□□□ -0.56
TFAP2B-202ENST00000393655 ACACBO00763 2458 aa11.57□□□□□ -0.56
TFAP2B-202ENST00000393655 SNURFQ9Y675 71 aa11.57□□□□□ -0.56
TFAP2B-202ENST00000393655 ARHGAP21Q5T5U3 1957 aa11.56□□□□□ -0.56
TFAP2B-202ENST00000393655 PRYO14603 147 aa11.56□□□□□ -0.56
TFAP2B-202ENST00000393655 C9orf116Q5BN46 136 aaPredicted RBP11.56□□□□□ -0.56
TFAP2B-202ENST00000393655 IGLV4-60A0A075B6I1 120 aa11.56□□□□□ -0.56
TFAP2B-202ENST00000393655 C10orf142B7Z368 130 aa11.56□□□□□ -0.56
TFAP2B-202ENST00000393655 GAS8-AS1O95177 125 aa11.55□□□□□ -0.56
TFAP2B-202ENST00000393655 Q8N814 137 aa11.55□□□□□ -0.56
TFAP2B-202ENST00000393655 CSDC2Q9Y534 153 aaKnown RBP11.55□□□□□ -0.56
TFAP2B-202ENST00000393655 LYPD5Q6UWN5 251 aa11.55□□□□□ -0.56
TFAP2B-202ENST00000393655 Q9BRP9 147 aa11.55□□□□□ -0.56
TFAP2B-202ENST00000393655 IGHV6-1A0A0B4J1U7 121 aa11.55□□□□□ -0.56
TFAP2B-202ENST00000393655 LIMD2Q9BT23 127 aa11.54□□□□□ -0.56
TFAP2B-202ENST00000393655 CUL9Q8IWT3 2517 aa11.54□□□□□ -0.56
TFAP2B-202ENST00000393655 A6NED7 52 aa11.54□□□□□ -0.56
TFAP2B-202ENST00000393655 BEAN1Q3B7T3 259 aa11.53□□□□□ -0.56
TFAP2B-202ENST00000393655 COX6A2Q02221 97 aa11.52□□□□□ -0.57
TFAP2B-202ENST00000393655 A0A1B0GUV1 79 aa11.52□□□□□ -0.57
TFAP2B-202ENST00000393655 PRR4Q16378 134 aa11.52□□□□□ -0.57
TFAP2B-202ENST00000393655 C2orf91Q6ZV80 131 aa11.52□□□□□ -0.57
TFAP2B-202ENST00000393655 LINC01561Q8N1V8 128 aa11.52□□□□□ -0.57
TFAP2B-202ENST00000393655 YPEL4Q96NS1 127 aa11.52□□□□□ -0.57
TFAP2B-202ENST00000393655 PCDH15Q96QU1 1955 aa11.5□□□□□ -0.57
TFAP2B-202ENST00000393655 KIAA1549Q9HCM3 1950 aa11.5□□□□□ -0.57
TFAP2B-202ENST00000393655 LINC00694P0DN24 101 aa11.5□□□□□ -0.57
TFAP2B-202ENST00000393655 NOTCH2Q04721 2471 aa11.5□□□□□ -0.57
TFAP2B-202ENST00000393655 BDP1A6H8Y1 2624 aa11.5□□□□□ -0.57
TFAP2B-202ENST00000393655 DSCAML1Q8TD84 2053 aa11.5□□□□□ -0.57
TFAP2B-202ENST00000393655 A0A1W2PPR1 153 aa11.5□□□□□ -0.57
TFAP2B-202ENST00000393655 FHL3Q13643 280 aa11.5□□□□□ -0.57
TFAP2B-202ENST00000393655 CELA1Q9UNI1 258 aa11.47□□□□□ -0.57
TFAP2B-202ENST00000393655 AMELXQ99217 191 aa11.47□□□□□ -0.57
TFAP2B-202ENST00000393655 COX7CP15954 63 aa11.46□□□□□ -0.58
TFAP2B-202ENST00000393655 Q8N2B8 174 aa11.45□□□□□ -0.58
TFAP2B-202ENST00000393655 X6R8D5 127 aa11.45□□□□□ -0.58
TFAP2B-202ENST00000393655 TTC28Q96AY4 2481 aa11.45□□□□□ -0.58
TFAP2B-202ENST00000393655 LINC00208Q96KT6 92 aa11.45□□□□□ -0.58
TFAP2B-202ENST00000393655 COL5A1P20908 1838 aaPredicted RBP11.45□□□□□ -0.58
TFAP2B-202ENST00000393655 LRP4O75096 1905 aa11.45□□□□□ -0.58
TFAP2B-202ENST00000393655 RETNLBQ9BQ08 111 aa11.45□□□□□ -0.58
TFAP2B-202ENST00000393655 CSPG4Q6UVK1 2322 aa11.44□□□□□ -0.58
TFAP2B-202ENST00000393655 PRR3P79522 188 aaKnown RBP11.44□□□□□ -0.58
TFAP2B-202ENST00000393655 LINC00337Q8N6G1 96 aa11.44□□□□□ -0.58
TFAP2B-202ENST00000393655 COX8CQ7Z4L0 72 aa11.44□□□□□ -0.58
TFAP2B-202ENST00000393655 SPG11Q96JI7 2443 aa11.43□□□□□ -0.58
TFAP2B-202ENST00000393655 A0A087WYN8 130 aa11.43□□□□□ -0.58
TFAP2B-202ENST00000393655 PTPN13Q12923 2485 aa11.43□□□□□ -0.58
TFAP2B-202ENST00000393655 TRAV7A0A075B6U4 112 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms