RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 RPL32P62910 135 aaKnown RBP11.31□□□□□ -0.6
PDLIM7-205ENST00000393551 SRSF9Q13242 221 aaKnown RBP eCLIP11.31□□□□□ -0.6
PDLIM7-205ENST00000393551 C5orf38Q86SI9 138 aa11.31□□□□□ -0.6
PDLIM7-205ENST00000393551 A0A1W2PNN7 141 aa11.3□□□□□ -0.6
PDLIM7-205ENST00000393551 TNFRSF6BO95407 300 aa11.3□□□□□ -0.6
PDLIM7-205ENST00000393551 CKS2P33552 79 aa11.3□□□□□ -0.6
PDLIM7-205ENST00000393551 GAGE2BQ13066 116 aa11.3□□□□□ -0.6
PDLIM7-205ENST00000393551 OPRPNQ99935 248 aaPredicted RBP11.3□□□□□ -0.6
PDLIM7-205ENST00000393551 PKIGQ9Y2B9 76 aa11.3□□□□□ -0.6
PDLIM7-205ENST00000393551 TRAV9-1A0A075B6T8 112 aa11.29□□□□□ -0.6
PDLIM7-205ENST00000393551 LOC107984640A0A0U1RRK4 108 aa11.29□□□□□ -0.6
PDLIM7-205ENST00000393551 A0A1B0GXF2 115 aa11.29□□□□□ -0.6
PDLIM7-205ENST00000393551 S100PP25815 95 aa11.29□□□□□ -0.6
PDLIM7-205ENST00000393551 MRPL54Q6P161 138 aaKnown RBP11.29□□□□□ -0.6
PDLIM7-205ENST00000393551 A0A1B0GW15 77 aa11.28□□□□□ -0.6
PDLIM7-205ENST00000393551 D6R8Y8 96 aa11.28□□□□□ -0.6
PDLIM7-205ENST00000393551 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.28□□□□□ -0.6
PDLIM7-205ENST00000393551 NPYP01303 97 aa11.28□□□□□ -0.6
PDLIM7-205ENST00000393551 SMAGPQ0VAQ4 97 aa11.28□□□□□ -0.6
PDLIM7-205ENST00000393551 SPINK6Q6UWN8 80 aa11.28□□□□□ -0.6
PDLIM7-205ENST00000393551 C2orf48Q96LS8 159 aa11.28□□□□□ -0.6
PDLIM7-205ENST00000393551 CAMK2N2Q96S95 79 aa11.28□□□□□ -0.6
PDLIM7-205ENST00000393551 SMIM2Q9BVW6 85 aa11.28□□□□□ -0.6
PDLIM7-205ENST00000393551 APOMO95445 188 aa11.27□□□□□ -0.61
PDLIM7-205ENST00000393551 Q6ZRP5 223 aa11.27□□□□□ -0.61
PDLIM7-205ENST00000393551 IGHV3OR16-9A0A0B4J2B5 98 aa11.26□□□□□ -0.61
PDLIM7-205ENST00000393551 A0A0J9YXV3 536 aa11.26□□□□□ -0.61
PDLIM7-205ENST00000393551 KRTAP10-8P60410 259 aa11.26□□□□□ -0.61
PDLIM7-205ENST00000393551 TMEM18Q96B42 140 aa11.26□□□□□ -0.61
PDLIM7-205ENST00000393551 TCAPO15273 167 aa11.25□□□□□ -0.61
PDLIM7-205ENST00000393551 HBBP68871 147 aa11.25□□□□□ -0.61
PDLIM7-205ENST00000393551 SCO1O75880 301 aa11.24□□□□□ -0.61
PDLIM7-205ENST00000393551 SPAG11BQ08648 103 aa11.24□□□□□ -0.61
PDLIM7-205ENST00000393551 C9orf116Q5BN46 136 aaPredicted RBP11.24□□□□□ -0.61
PDLIM7-205ENST00000393551 SPANXA1Q9NS26 97 aa11.24□□□□□ -0.61
PDLIM7-205ENST00000393551 MRPS36P82909 103 aaKnown RBP11.23□□□□□ -0.61
PDLIM7-205ENST00000393551 CBLN2Q8IUK8 224 aa11.23□□□□□ -0.61
PDLIM7-205ENST00000393551 OR10D4PQ8NGN7 298 aa11.23□□□□□ -0.61
PDLIM7-205ENST00000393551 RPL18AQ02543 176 aaKnown RBP11.22□□□□□ -0.61
PDLIM7-205ENST00000393551 RNF151Q2KHN1 245 aa11.22□□□□□ -0.61
PDLIM7-205ENST00000393551 C10orf25Q5T742 122 aa11.22□□□□□ -0.61
PDLIM7-205ENST00000393551 YPEL4Q96NS1 127 aa11.22□□□□□ -0.61
PDLIM7-205ENST00000393551 RNF213Q63HN8 5207 aa11.21□□□□□ -0.61
PDLIM7-205ENST00000393551 S100A8P05109 93 aa11.21□□□□□ -0.61
PDLIM7-205ENST00000393551 COX19Q49B96 90 aa11.21□□□□□ -0.61
PDLIM7-205ENST00000393551 ORAOV1Q8WV07 137 aa11.21□□□□□ -0.61
PDLIM7-205ENST00000393551 PSORS1C2Q9UIG4 136 aa11.21□□□□□ -0.61
PDLIM7-205ENST00000393551 COLCA2A8K830 154 aa11.2□□□□□ -0.62
PDLIM7-205ENST00000393551 PPBPP02775 128 aa11.2□□□□□ -0.62
PDLIM7-205ENST00000393551 REG3GQ6UW15 175 aa11.2□□□□□ -0.62
PDLIM7-205ENST00000393551 PHF5AQ7RTV0 110 aaKnown RBP11.2□□□□□ -0.62
PDLIM7-205ENST00000393551 MRPL35Q9NZE8 188 aaKnown RBP11.2□□□□□ -0.62
PDLIM7-205ENST00000393551 IFITM10A6NMD0 228 aa11.19□□□□□ -0.62
PDLIM7-205ENST00000393551 ORMDL3Q8N138 153 aa11.19□□□□□ -0.62
PDLIM7-205ENST00000393551 TMEM136Q6ZRR5 245 aa11.18□□□□□ -0.62
PDLIM7-205ENST00000393551 ATP5L2Q7Z4Y8 100 aa11.18□□□□□ -0.62
PDLIM7-205ENST00000393551 PRELID3AQ96N28 172 aa11.18□□□□□ -0.62
PDLIM7-205ENST00000393551 FAM168BA1KXE4 195 aa11.17□□□□□ -0.62
PDLIM7-205ENST00000393551 KIAA0087Q14695 138 aa11.17□□□□□ -0.62
PDLIM7-205ENST00000393551 UNQ6190/PRO20217Q6UXQ8 127 aa11.17□□□□□ -0.62
PDLIM7-205ENST00000393551 KRTAP11-1Q8IUC1 163 aa11.17□□□□□ -0.62
PDLIM7-205ENST00000393551 C6orf48Q9UBA6 75 aa11.17□□□□□ -0.62
PDLIM7-205ENST00000393551 IGLV4-3A0A075B6K6 122 aa11.16□□□□□ -0.62
PDLIM7-205ENST00000393551 PRSS47A8MTI9 375 aa11.16□□□□□ -0.62
PDLIM7-205ENST00000393551 LINC00242Q5T6M2 205 aa11.16□□□□□ -0.62
PDLIM7-205ENST00000393551 KRTAP7-1Q8IUC3 87 aa11.16□□□□□ -0.62
PDLIM7-205ENST00000393551 PYGO1Q9Y3Y4 419 aa11.16□□□□□ -0.62
PDLIM7-205ENST00000393551 F8WDY8 70 aa11.15□□□□□ -0.62
PDLIM7-205ENST00000393551 NDUFA1O15239 70 aa11.15□□□□□ -0.62
PDLIM7-205ENST00000393551 TLX1NBP0CAT3 122 aa11.15□□□□□ -0.62
PDLIM7-205ENST00000393551 RAB5AP20339 215 aa11.15□□□□□ -0.62
PDLIM7-205ENST00000393551 A0A087WZ39 114 aa11.14□□□□□ -0.63
PDLIM7-205ENST00000393551 MT-ND6P03923 174 aa11.14□□□□□ -0.63
PDLIM7-205ENST00000393551 IFI27P40305 119 aaPredicted RBP11.14□□□□□ -0.63
PDLIM7-205ENST00000393551 TGIF2-C20orf24A0A0A6YYL0 155 aa11.13□□□□□ -0.63
PDLIM7-205ENST00000393551 LOC389332A0A1B0GUA5 103 aa11.13□□□□□ -0.63
PDLIM7-205ENST00000393551 C1orf137Q5JT78 98 aa11.13□□□□□ -0.63
PDLIM7-205ENST00000393551 ZC2HC1BQ5TFG8 222 aa11.13□□□□□ -0.63
PDLIM7-205ENST00000393551 LPAP08519 4548 aa11.12□□□□□ -0.63
PDLIM7-205ENST00000393551 LINC00173Q6ZV60 143 aa11.12□□□□□ -0.63
PDLIM7-205ENST00000393551 TMEM141Q96I45 108 aa11.12□□□□□ -0.63
PDLIM7-205ENST00000393551 GNB1LQ9BYB4 327 aa11.12□□□□□ -0.63
PDLIM7-205ENST00000393551 UBE2D1P51668 147 aa11.11□□□□□ -0.63
PDLIM7-205ENST00000393551 C2orf82Q6UX34 121 aa11.11□□□□□ -0.63
PDLIM7-205ENST00000393551 GAGE2EQ4V326 116 aa11.1□□□□□ -0.63
PDLIM7-205ENST00000393551 GAGE2DQ9UEU5 116 aa11.1□□□□□ -0.63
PDLIM7-205ENST00000393551 LAMTOR2Q9Y2Q5 125 aa11.1□□□□□ -0.63
PDLIM7-205ENST00000393551 IGLV7-43P04211 117 aa11.09□□□□□ -0.63
PDLIM7-205ENST00000393551 FAM19A5Q7Z5A7 132 aaPredicted RBP11.09□□□□□ -0.63
PDLIM7-205ENST00000393551 Q8N8P6 123 aa11.09□□□□□ -0.63
PDLIM7-205ENST00000393551 MAP1LC3AQ9H492 121 aa11.09□□□□□ -0.63
PDLIM7-205ENST00000393551 C2orf66Q6UXQ4 117 aa11.08□□□□□ -0.64
PDLIM7-205ENST00000393551 TEX43Q6ZNM6 134 aa11.08□□□□□ -0.64
PDLIM7-205ENST00000393551 AMELXQ99217 191 aa11.08□□□□□ -0.64
PDLIM7-205ENST00000393551 TRBV30A0A0K0K1B3 111 aa11.06□□□□□ -0.64
PDLIM7-205ENST00000393551 IGIPA6NJ69 53 aa11.06□□□□□ -0.64
PDLIM7-205ENST00000393551 C9orf129Q5T035 196 aaKnown RBP11.06□□□□□ -0.64
PDLIM7-205ENST00000393551 CYSLTR1Q9Y271 337 aa11.06□□□□□ -0.64
PDLIM7-205ENST00000393551 TRAPPC1Q9Y5R8 145 aa11.06□□□□□ -0.64
PDLIM7-205ENST00000393551 LINC01561Q8N1V8 128 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms