RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 ZNF861PO60384 105 aa2.37□□□□□ -2.03
XRN1-202ENST00000392981 ERC2-IT1O76042 136 aa2.37□□□□□ -2.03
XRN1-202ENST00000392981 SNURFQ9Y675 71 aa2.37□□□□□ -2.03
XRN1-202ENST00000392981 DOCK6Q96HP0 2047 aa2.37□□□□□ -2.03
XRN1-202ENST00000392981 KIAA1549LQ6ZVL6 1849 aa2.37□□□□□ -2.03
XRN1-202ENST00000392981 C1orf147Q96MC9 270 aaPredicted RBP2.37□□□□□ -2.03
XRN1-202ENST00000392981 SHROOM3Q8TF72 1996 aa2.37□□□□□ -2.03
XRN1-202ENST00000392981 GTF3C1Q12789 2109 aa2.37□□□□□ -2.03
XRN1-202ENST00000392981 COL27A1Q8IZC6 1860 aaPredicted RBP2.37□□□□□ -2.03
XRN1-202ENST00000392981 MYO16Q9Y6X6 1858 aa2.37□□□□□ -2.03
XRN1-202ENST00000392981 CTSGP08311 255 aa2.37□□□□□ -2.03
XRN1-202ENST00000392981 SBSPONQ8IVN8 264 aa2.37□□□□□ -2.03
XRN1-202ENST00000392981 ZNF407Q9C0G0 2248 aa2.37□□□□□ -2.03
XRN1-202ENST00000392981 Q6P435 159 aa2.37□□□□□ -2.03
XRN1-202ENST00000392981 COX7B2Q8TF08 81 aa2.37□□□□□ -2.03
XRN1-202ENST00000392981 SDK1Q7Z5N4 2213 aa2.37□□□□□ -2.03
XRN1-202ENST00000392981 GREB1Q4ZG55 1949 aa2.37□□□□□ -2.03
XRN1-202ENST00000392981 TRBV25-1A0A075B6N4 114 aa2.36□□□□□ -2.03
XRN1-202ENST00000392981 DYNAPQ8N1N2 210 aa2.36□□□□□ -2.03
XRN1-202ENST00000392981 WNK1Q9H4A3 2382 aa2.36□□□□□ -2.03
XRN1-202ENST00000392981 IGKV1D-37A0A075B6S9 117 aa2.36□□□□□ -2.03
XRN1-202ENST00000392981 F8VRH5 84 aa2.36□□□□□ -2.03
XRN1-202ENST00000392981 ATP5EP2Q5VTU8 51 aa2.36□□□□□ -2.03
XRN1-202ENST00000392981 DEFB104AQ8WTQ1 72 aa2.36□□□□□ -2.03
XRN1-202ENST00000392981 EP300Q09472 2414 aaPredicted RBP2.36□□□□□ -2.03
XRN1-202ENST00000392981 ANAPC1Q9H1A4 1944 aa2.36□□□□□ -2.03
XRN1-202ENST00000392981 IGHV3OR16-8A0A075B7F1 116 aa2.36□□□□□ -2.03
XRN1-202ENST00000392981 C19orf84I3L1E1 186 aa2.36□□□□□ -2.03
XRN1-202ENST00000392981 Q6ZQT0 140 aa2.36□□□□□ -2.03
XRN1-202ENST00000392981 Q8N8P6 123 aa2.36□□□□□ -2.03
XRN1-202ENST00000392981 S4R3C0 116 aa2.36□□□□□ -2.03
XRN1-202ENST00000392981 I3L3M4 83 aa2.36□□□□□ -2.03
XRN1-202ENST00000392981 SPINT4Q6UDR6 99 aa2.36□□□□□ -2.03
XRN1-202ENST00000392981 SPTBN2O15020 2390 aa2.36□□□□□ -2.03
XRN1-202ENST00000392981 SDK2Q58EX2 2172 aa2.36□□□□□ -2.03
XRN1-202ENST00000392981 RAI1Q7Z5J4 1906 aaPredicted RBP2.36□□□□□ -2.03
XRN1-202ENST00000392981 CPAMD8Q8IZJ3 1885 aa2.36□□□□□ -2.03
XRN1-202ENST00000392981 LTBP2Q14767 1821 aa2.36□□□□□ -2.03
XRN1-202ENST00000392981 AKAP6Q13023 2319 aa2.36□□□□□ -2.03
XRN1-202ENST00000392981 A8MUU9 505 aa2.36□□□□□ -2.03
XRN1-202ENST00000392981 SPAG11BQ08648 103 aa2.36□□□□□ -2.03
XRN1-202ENST00000392981 KRTAP25-1Q3LHN0 102 aa2.36□□□□□ -2.03
XRN1-202ENST00000392981 LEAP2Q969E1 77 aa2.36□□□□□ -2.03
XRN1-202ENST00000392981 ODF3Q96PU9 254 aa2.36□□□□□ -2.03
XRN1-202ENST00000392981 GFRA4Q9GZZ7 299 aa2.36□□□□□ -2.03
XRN1-202ENST00000392981 C16orf95Q9H693 158 aa2.36□□□□□ -2.03
XRN1-202ENST00000392981 COL4A2P08572 1712 aa2.35□□□□□ -2.03
XRN1-202ENST00000392981 OBSL1O75147 1896 aa2.35□□□□□ -2.03
XRN1-202ENST00000392981 DNAH10OSP0CZ25 163 aa2.35□□□□□ -2.03
XRN1-202ENST00000392981 PRCDQ00LT1 54 aa2.35□□□□□ -2.03
XRN1-202ENST00000392981 PHF5AQ7RTV0 110 aaKnown RBP2.35□□□□□ -2.03
XRN1-202ENST00000392981 MRPL35Q9NZE8 188 aaKnown RBP2.35□□□□□ -2.03
XRN1-202ENST00000392981 KLK12Q9UKR0 248 aa2.35□□□□□ -2.03
XRN1-202ENST00000392981 TET2Q6N021 2002 aaPredicted RBP2.35□□□□□ -2.03
XRN1-202ENST00000392981 AHCTF1Q8WYP5 2266 aa2.35□□□□□ -2.03
XRN1-202ENST00000392981 PLXNA3P51805 1871 aa2.35□□□□□ -2.03
XRN1-202ENST00000392981 TEX49A0A1B0GTD5 131 aa2.35□□□□□ -2.03
XRN1-202ENST00000392981 TMEM14DPA8MWL7 114 aa2.35□□□□□ -2.03
XRN1-202ENST00000392981 CD24P25063 80 aa2.35□□□□□ -2.03
XRN1-202ENST00000392981 IGLV3-12A0A075B6K2 115 aa2.34□□□□□ -2.03
XRN1-202ENST00000392981 IGKV2-40A0A087WW87 121 aaPredicted RBP2.34□□□□□ -2.03
XRN1-202ENST00000392981 IGKV2D-40P01614 121 aaPredicted RBP2.34□□□□□ -2.03
XRN1-202ENST00000392981 ATP11AUNQ6ZP68 121 aa2.34□□□□□ -2.03
XRN1-202ENST00000392981 LYPD1Q8N2G4 141 aa2.34□□□□□ -2.03
XRN1-202ENST00000392981 RPL39P5Q59GN2 51 aa2.34□□□□□ -2.03
XRN1-202ENST00000392981 COL2A1P02458 1487 aaPredicted RBP2.34□□□□□ -2.03
XRN1-202ENST00000392981 SDHAF1A6NFY7 115 aa2.34□□□□□ -2.04
XRN1-202ENST00000392981 ARMS2P0C7Q2 107 aa2.34□□□□□ -2.04
XRN1-202ENST00000392981 COL8A2P25067 703 aa2.34□□□□□ -2.04
XRN1-202ENST00000392981 DEFB130BP0DP73 79 aa2.34□□□□□ -2.04
XRN1-202ENST00000392981 DEFB130AP0DP74 79 aa2.34□□□□□ -2.04
XRN1-202ENST00000392981 LINC00612Q8N6U2 182 aa2.34□□□□□ -2.04
XRN1-202ENST00000392981 WFDC10AQ9H1F0 79 aa2.34□□□□□ -2.04
XRN1-202ENST00000392981 EXPH5Q8NEV8 1989 aa2.34□□□□□ -2.04
XRN1-202ENST00000392981 CADP27708 2225 aa2.34□□□□□ -2.04
XRN1-202ENST00000392981 ANKRD36A6QL64 1941 aa2.33□□□□□ -2.04
XRN1-202ENST00000392981 A0A087WYN8 130 aa2.33□□□□□ -2.04
XRN1-202ENST00000392981 DOCK4Q8N1I0 1966 aa2.33□□□□□ -2.04
XRN1-202ENST00000392981 PTPRZ1P23471 2315 aaPredicted RBP2.33□□□□□ -2.04
XRN1-202ENST00000392981 IGKV2-24A0A0C4DH68 120 aa2.33□□□□□ -2.04
XRN1-202ENST00000392981 TRGV9Q99603 122 aa2.33□□□□□ -2.04
XRN1-202ENST00000392981 ALPK2Q86TB3 2170 aa2.33□□□□□ -2.04
XRN1-202ENST00000392981 ARFGEF3Q5TH69 2177 aa2.33□□□□□ -2.04
XRN1-202ENST00000392981 CCL5P13501 91 aa2.33□□□□□ -2.04
XRN1-202ENST00000392981 COX6B1P14854 86 aa2.33□□□□□ -2.04
XRN1-202ENST00000392981 UBE2D2P62837 147 aa2.33□□□□□ -2.04
XRN1-202ENST00000392981 SPAG11AQ6PDA7 123 aa2.33□□□□□ -2.04
XRN1-202ENST00000392981 ENHOQ6UWT2 76 aa2.33□□□□□ -2.04
XRN1-202ENST00000392981 MUC7Q8TAX7 377 aa2.33□□□□□ -2.04
XRN1-202ENST00000392981 LINC01600Q96MT4 127 aa2.33□□□□□ -2.04
XRN1-202ENST00000392981 ABCA4P78363 2273 aa2.33□□□□□ -2.04
XRN1-202ENST00000392981 FRAS1Q86XX4 4008 aa2.33□□□□□ -2.04
XRN1-202ENST00000392981 PIN1P1O15428 100 aa2.32□□□□□ -2.04
XRN1-202ENST00000392981 ANGP03950 147 aaKnown RBP2.32□□□□□ -2.04
XRN1-202ENST00000392981 UBE2D4Q9Y2X8 147 aa2.32□□□□□ -2.04
XRN1-202ENST00000392981 IL9P15248 144 aa2.32□□□□□ -2.04
XRN1-202ENST00000392981 Q8N814 137 aa2.32□□□□□ -2.04
XRN1-202ENST00000392981 INTS1Q8N201 2190 aaKnown RBP2.32□□□□□ -2.04
XRN1-202ENST00000392981 FANCMQ8IYD8 2048 aa2.32□□□□□ -2.04
XRN1-202ENST00000392981 TRBV7-3A0A075B6L6 115 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms