RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 WNK1Q9H4A3 2382 aa11.89□□□□□ -0.51
SCN3B-202ENST00000392770 A0A096LNJ9 63 aa11.89□□□□□ -0.51
SCN3B-202ENST00000392770 COX6A2Q02221 97 aa11.89□□□□□ -0.51
SCN3B-202ENST00000392770 TEX49A0A1B0GTD5 131 aa11.89□□□□□ -0.51
SCN3B-202ENST00000392770 DSCAML1Q8TD84 2053 aa11.88□□□□□ -0.51
SCN3B-202ENST00000392770 POM121L12Q8N7R1 296 aa11.88□□□□□ -0.51
SCN3B-202ENST00000392770 HIVEP3Q5T1R4 2406 aa11.87□□□□□ -0.51
SCN3B-202ENST00000392770 C5orf47Q569G3 176 aa11.87□□□□□ -0.51
SCN3B-202ENST00000392770 FAM19A1Q7Z5A9 133 aa11.86□□□□□ -0.51
SCN3B-202ENST00000392770 Q8IZM0 81 aa11.86□□□□□ -0.51
SCN3B-202ENST00000392770 HIGD2AQ9BW72 106 aa11.86□□□□□ -0.51
SCN3B-202ENST00000392770 NOTCH2Q04721 2471 aa11.86□□□□□ -0.51
SCN3B-202ENST00000392770 IGLV4-60A0A075B6I1 120 aa11.86□□□□□ -0.51
SCN3B-202ENST00000392770 NDUFC2O95298 119 aa11.86□□□□□ -0.51
SCN3B-202ENST00000392770 TRAV23DV6A0A075B6W5 121 aa11.85□□□□□ -0.51
SCN3B-202ENST00000392770 FAM19A4Q96LR4 140 aa11.85□□□□□ -0.51
SCN3B-202ENST00000392770 FAM236AA0A1B0GUQ0 79 aa11.85□□□□□ -0.51
SCN3B-202ENST00000392770 FAM236BA0A1B0GV22 79 aa11.85□□□□□ -0.51
SCN3B-202ENST00000392770 C6orf99Q4VX62 202 aa11.85□□□□□ -0.51
SCN3B-202ENST00000392770 M0R2N4 97 aa11.84□□□□□ -0.51
SCN3B-202ENST00000392770 COX17Q14061 63 aa11.84□□□□□ -0.51
SCN3B-202ENST00000392770 SMIM1B2RUZ4 78 aa11.83□□□□□ -0.51
SCN3B-202ENST00000392770 PDE6GP18545 87 aa11.83□□□□□ -0.51
SCN3B-202ENST00000392770 TSPEAR-AS2P59090 65 aa11.83□□□□□ -0.51
SCN3B-202ENST00000392770 AMELXQ99217 191 aa11.83□□□□□ -0.52
SCN3B-202ENST00000392770 Q6ZTC4 211 aa11.83□□□□□ -0.52
SCN3B-202ENST00000392770 J3KT08 172 aa11.82□□□□□ -0.52
SCN3B-202ENST00000392770 A0A087WZ39 114 aa11.82□□□□□ -0.52
SCN3B-202ENST00000392770 IGKV2-28A0A075B6P5 120 aa11.82□□□□□ -0.52
SCN3B-202ENST00000392770 IGKV2D-28P01615 120 aa11.82□□□□□ -0.52
SCN3B-202ENST00000392770 NDUFB1O75438 58 aa11.81□□□□□ -0.52
SCN3B-202ENST00000392770 A0A1B0GX51 115 aa11.81□□□□□ -0.52
SCN3B-202ENST00000392770 SMIM11BQ8TCY0 68 aa11.81□□□□□ -0.52
SCN3B-202ENST00000392770 KIF25-AS1Q9Y6Z4 181 aa11.81□□□□□ -0.52
SCN3B-202ENST00000392770 CYSRT1A8MQ03 144 aa11.81□□□□□ -0.52
SCN3B-202ENST00000392770 C11orf72Q8NBR9 251 aa11.81□□□□□ -0.52
SCN3B-202ENST00000392770 CHKB-CPT1BH3BT56 60 aa11.8□□□□□ -0.52
SCN3B-202ENST00000392770 M0R378 163 aa11.8□□□□□ -0.52
SCN3B-202ENST00000392770 CSDC2Q9Y534 153 aaKnown RBP11.8□□□□□ -0.52
SCN3B-202ENST00000392770 ATOX1O00244 68 aa11.79□□□□□ -0.52
SCN3B-202ENST00000392770 HTTP42858 3142 aa11.79□□□□□ -0.52
SCN3B-202ENST00000392770 LOC107984640A0A0U1RRK4 108 aa11.78□□□□□ -0.52
SCN3B-202ENST00000392770 FHL3Q13643 280 aa11.78□□□□□ -0.52
SCN3B-202ENST00000392770 LINC00643Q86TS7 51 aa11.77□□□□□ -0.52
SCN3B-202ENST00000392770 CCDC168Q8NDH2 2452 aa11.77□□□□□ -0.53
SCN3B-202ENST00000392770 LST1O00453 97 aa11.76□□□□□ -0.53
SCN3B-202ENST00000392770 LINC01546A6NGU7 62 aa11.76□□□□□ -0.53
SCN3B-202ENST00000392770 UNQ6190/PRO20217Q6UXQ8 127 aa11.76□□□□□ -0.53
SCN3B-202ENST00000392770 FSHBP01225 129 aa11.76□□□□□ -0.53
SCN3B-202ENST00000392770 ANKRD11Q6UB99 2663 aaPredicted RBP11.75□□□□□ -0.53
SCN3B-202ENST00000392770 C9orf116Q5BN46 136 aaPredicted RBP11.75□□□□□ -0.53
SCN3B-202ENST00000392770 SVIPQ8NHG7 77 aa11.75□□□□□ -0.53
SCN3B-202ENST00000392770 CEP295Q9C0D2 2601 aa11.75□□□□□ -0.53
SCN3B-202ENST00000392770 RPL37AP8A6NKH3 93 aa11.75□□□□□ -0.53
SCN3B-202ENST00000392770 LY6G6CO95867 125 aa11.74□□□□□ -0.53
SCN3B-202ENST00000392770 C4orf48Q5BLP8 95 aa11.74□□□□□ -0.53
SCN3B-202ENST00000392770 CHD7Q9P2D1 2997 aa11.74□□□□□ -0.53
SCN3B-202ENST00000392770 C5orf42Q9H799 3197 aa11.73□□□□□ -0.53
SCN3B-202ENST00000392770 ADAMTSL4-AS1Q5T5F5 129 aa11.73□□□□□ -0.53
SCN3B-202ENST00000392770 UPK3BQ9BT76 320 aa11.73□□□□□ -0.53
SCN3B-202ENST00000392770 A0A096LNI7 61 aa11.73□□□□□ -0.53
SCN3B-202ENST00000392770 MT-ATP8P03928 68 aa11.73□□□□□ -0.53
SCN3B-202ENST00000392770 NUPR2A6NF83 97 aa11.73□□□□□ -0.53
SCN3B-202ENST00000392770 LYPD5Q6UWN5 251 aa11.73□□□□□ -0.53
SCN3B-202ENST00000392770 CELA1Q9UNI1 258 aa11.73□□□□□ -0.53
SCN3B-202ENST00000392770 KLK9Q2XQG4 91 aa11.72□□□□□ -0.53
SCN3B-202ENST00000392770 BRK1Q8WUW1 75 aa11.72□□□□□ -0.53
SCN3B-202ENST00000392770 H0Y9J4 135 aa11.72□□□□□ -0.53
SCN3B-202ENST00000392770 MUC7Q8TAX7 377 aa11.72□□□□□ -0.53
SCN3B-202ENST00000392770 LINC00315P59091 139 aa11.72□□□□□ -0.53
SCN3B-202ENST00000392770 SDIM1Q6ZPB5 146 aa11.71□□□□□ -0.53
SCN3B-202ENST00000392770 ZNF73O43830 326 aaPredicted RBP11.71□□□□□ -0.54
SCN3B-202ENST00000392770 A0A1B0GUV1 79 aa11.71□□□□□ -0.54
SCN3B-202ENST00000392770 Q6ZQY7 126 aa11.71□□□□□ -0.54
SCN3B-202ENST00000392770 BPTFQ12830 3046 aa11.71□□□□□ -0.54
SCN3B-202ENST00000392770 BPY2O14599 106 aa11.7□□□□□ -0.54
SCN3B-202ENST00000392770 WFDC10BQ8IUB3 73 aa11.7□□□□□ -0.54
SCN3B-202ENST00000392770 DHRS4-AS1Q9P1J3 65 aa11.7□□□□□ -0.54
SCN3B-202ENST00000392770 LRCOL1A6NCL2 159 aa11.69□□□□□ -0.54
SCN3B-202ENST00000392770 MP68P56378 58 aa11.68□□□□□ -0.54
SCN3B-202ENST00000392770 EGFEM1PQ0D2K5 195 aa11.68□□□□□ -0.54
SCN3B-202ENST00000392770 C6orf223Q8N319 242 aa11.68□□□□□ -0.54
SCN3B-202ENST00000392770 SCXQ7RTU7 201 aa11.68□□□□□ -0.54
SCN3B-202ENST00000392770 SORL1Q92673 2214 aa11.67□□□□□ -0.54
SCN3B-202ENST00000392770 PRR3P79522 188 aaKnown RBP11.66□□□□□ -0.54
SCN3B-202ENST00000392770 ENHOQ6UWT2 76 aa11.65□□□□□ -0.54
SCN3B-202ENST00000392770 WFDC9Q8NEX5 89 aa11.65□□□□□ -0.54
SCN3B-202ENST00000392770 CCKP06307 115 aa11.65□□□□□ -0.54
SCN3B-202ENST00000392770 C7orf33Q8WU49 177 aa11.65□□□□□ -0.54
SCN3B-202ENST00000392770 PPDPFQ9H3Y8 114 aa11.65□□□□□ -0.54
SCN3B-202ENST00000392770 USP17L23D6RBM5 183 aa11.64□□□□□ -0.55
SCN3B-202ENST00000392770 NTM-AS1Q6ZSK4 140 aa11.63□□□□□ -0.55
SCN3B-202ENST00000392770 LINC00474Q9P2X8 69 aa11.63□□□□□ -0.55
SCN3B-202ENST00000392770 TRBV10-3A0A0K0K1G6 114 aa11.63□□□□□ -0.55
SCN3B-202ENST00000392770 PLAC8L1A1L4L8 177 aa11.62□□□□□ -0.55
SCN3B-202ENST00000392770 C3orf84H3BNL1 204 aa11.62□□□□□ -0.55
SCN3B-202ENST00000392770 SONP18583 2426 aaKnown RBP11.62□□□□□ -0.55
SCN3B-202ENST00000392770 ATP5EP2Q5VTU8 51 aa11.62□□□□□ -0.55
SCN3B-202ENST00000392770 RPL28P46779 137 aaKnown RBP11.62□□□□□ -0.55
SCN3B-202ENST00000392770 KRTAP24-1Q3LI83 254 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms