RNA–Protein interactions for RNA: ENST00000392415.6

UBE2E3-201, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene UBE2E3, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-201ENST00000392415 A0A096LNI7 61 aa13.01□□□□□ -0.33
UBE2E3-201ENST00000392415 APOMO95445 188 aa13.01□□□□□ -0.33
UBE2E3-201ENST00000392415 TRAV9-1A0A075B6T8 112 aa13□□□□□ -0.33
UBE2E3-201ENST00000392415 IGHV3OR16-9A0A0B4J2B5 98 aa13□□□□□ -0.33
UBE2E3-201ENST00000392415 J3QL48 77 aa13□□□□□ -0.33
UBE2E3-201ENST00000392415 LINC00474Q9P2X8 69 aa13□□□□□ -0.33
UBE2E3-201ENST00000392415 IFITM10A6NMD0 228 aa12.99□□□□□ -0.33
UBE2E3-201ENST00000392415 COMMD7Q86VX2 200 aa12.99□□□□□ -0.33
UBE2E3-201ENST00000392415 C2orf48Q96LS8 159 aa12.99□□□□□ -0.33
UBE2E3-201ENST00000392415 IGLV4-3A0A075B6K6 122 aa12.98□□□□□ -0.33
UBE2E3-201ENST00000392415 K7EMI3 77 aa12.98□□□□□ -0.33
UBE2E3-201ENST00000392415 HNRNPA3P51991 378 aaKnown RBP12.98□□□□□ -0.33
UBE2E3-201ENST00000392415 Q6ZRU5 148 aa12.98□□□□□ -0.33
UBE2E3-201ENST00000392415 STPG4Q8N801 248 aa12.98□□□□□ -0.33
UBE2E3-201ENST00000392415 CAMK2N2Q96S95 79 aa12.97□□□□□ -0.33
UBE2E3-201ENST00000392415 CYSLTR1Q9Y271 337 aa12.97□□□□□ -0.33
UBE2E3-201ENST00000392415 ORMDL2Q53FV1 153 aa12.96□□□□□ -0.33
UBE2E3-201ENST00000392415 C2orf66Q6UXQ4 117 aa12.96□□□□□ -0.33
UBE2E3-201ENST00000392415 OR10D4PQ8NGN7 298 aa12.96□□□□□ -0.33
UBE2E3-201ENST00000392415 TMEM141Q96I45 108 aa12.96□□□□□ -0.33
UBE2E3-201ENST00000392415 NXT2Q9NPJ8 142 aaKnown RBP12.96□□□□□ -0.33
UBE2E3-201ENST00000392415 SPAG11BQ08648 103 aa12.95□□□□□ -0.34
UBE2E3-201ENST00000392415 C10orf91Q5T1B1 145 aa12.95□□□□□ -0.34
UBE2E3-201ENST00000392415 C7orf33Q8WU49 177 aa12.95□□□□□ -0.34
UBE2E3-201ENST00000392415 OXTP01178 125 aa12.94□□□□□ -0.34
UBE2E3-201ENST00000392415 S100PP25815 95 aa12.94□□□□□ -0.34
UBE2E3-201ENST00000392415 LOC107984640A0A0U1RRK4 108 aa12.93□□□□□ -0.34
UBE2E3-201ENST00000392415 PTTG1IPP53801 180 aa12.93□□□□□ -0.34
UBE2E3-201ENST00000392415 KIAA1644Q3SXP7 199 aa12.93□□□□□ -0.34
UBE2E3-201ENST00000392415 LINC00242Q5T6M2 205 aa12.93□□□□□ -0.34
UBE2E3-201ENST00000392415 ORAOV1Q8WV07 137 aa12.93□□□□□ -0.34
UBE2E3-201ENST00000392415 TGIF2-C20orf24A0A0A6YYL0 155 aa12.92□□□□□ -0.34
UBE2E3-201ENST00000392415 NPSP0C0P6 89 aa12.92□□□□□ -0.34
UBE2E3-201ENST00000392415 TEX43Q6ZNM6 134 aa12.92□□□□□ -0.34
UBE2E3-201ENST00000392415 GNB1LQ9BYB4 327 aa12.92□□□□□ -0.34
UBE2E3-201ENST00000392415 CARHSP1Q9Y2V2 147 aaKnown RBP12.92□□□□□ -0.34
UBE2E3-201ENST00000392415 A0A087WZ39 114 aa12.91□□□□□ -0.34
UBE2E3-201ENST00000392415 F8WDY8 70 aa12.91□□□□□ -0.34
UBE2E3-201ENST00000392415 UBE2D1P51668 147 aa12.91□□□□□ -0.34
UBE2E3-201ENST00000392415 RNF151Q2KHN1 245 aa12.91□□□□□ -0.34
UBE2E3-201ENST00000392415 AMELXQ99217 191 aa12.91□□□□□ -0.34
UBE2E3-201ENST00000392415 IGIPA6NJ69 53 aa12.9□□□□□ -0.34
UBE2E3-201ENST00000392415 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.9□□□□□ -0.34
UBE2E3-201ENST00000392415 GAGE2BQ13066 116 aa12.9□□□□□ -0.34
UBE2E3-201ENST00000392415 Q6ZN92 141 aa12.9□□□□□ -0.34
UBE2E3-201ENST00000392415 LINC00173Q6ZV60 143 aa12.9□□□□□ -0.34
UBE2E3-201ENST00000392415 C2orf88Q9BSF0 95 aa12.9□□□□□ -0.34
UBE2E3-201ENST00000392415 G0S2P27469 103 aa12.89□□□□□ -0.35
UBE2E3-201ENST00000392415 RHEBQ15382 184 aa12.89□□□□□ -0.35
UBE2E3-201ENST00000392415 VCX2Q9H322 139 aa12.89□□□□□ -0.35
UBE2E3-201ENST00000392415 MRPL35Q9NZE8 188 aaKnown RBP12.89□□□□□ -0.35
UBE2E3-201ENST00000392415 COX19Q49B96 90 aa12.88□□□□□ -0.35
UBE2E3-201ENST00000392415 ZC2HC1BQ5TFG8 222 aa12.88□□□□□ -0.35
UBE2E3-201ENST00000392415 RPS10P5Q9NQ39 176 aa12.88□□□□□ -0.35
UBE2E3-201ENST00000392415 A0A0J9YXV3 536 aa12.87□□□□□ -0.35
UBE2E3-201ENST00000392415 NDUFA1O15239 70 aa12.87□□□□□ -0.35
UBE2E3-201ENST00000392415 KIAA0087Q14695 138 aa12.87□□□□□ -0.35
UBE2E3-201ENST00000392415 LINC01561Q8N1V8 128 aa12.87□□□□□ -0.35
UBE2E3-201ENST00000392415 TOMM6Q96B49 74 aa12.87□□□□□ -0.35
UBE2E3-201ENST00000392415 ALKBH7Q9BT30 221 aaPredicted RBP12.87□□□□□ -0.35
UBE2E3-201ENST00000392415 C10orf25Q5T742 122 aa12.86□□□□□ -0.35
UBE2E3-201ENST00000392415 FAM19A3Q7Z5A8 133 aa12.86□□□□□ -0.35
UBE2E3-201ENST00000392415 TIMM17AQ99595 171 aa12.86□□□□□ -0.35
UBE2E3-201ENST00000392415 A0A1W2PNN7 141 aa12.85□□□□□ -0.35
UBE2E3-201ENST00000392415 MT-ND6P03923 174 aa12.85□□□□□ -0.35
UBE2E3-201ENST00000392415 PRR3P79522 188 aaKnown RBP12.85□□□□□ -0.35
UBE2E3-201ENST00000392415 RPL18AQ02543 176 aaKnown RBP12.85□□□□□ -0.35
UBE2E3-201ENST00000392415 PAPPA-AS1Q5QFB9 102 aa12.85□□□□□ -0.35
UBE2E3-201ENST00000392415 LINC01546A6NGU7 62 aa12.84□□□□□ -0.35
UBE2E3-201ENST00000392415 UNQ6190/PRO20217Q6UXQ8 127 aa12.84□□□□□ -0.35
UBE2E3-201ENST00000392415 TLX1NBP0CAT3 122 aa12.83□□□□□ -0.36
UBE2E3-201ENST00000392415 C6orf48Q9UBA6 75 aa12.83□□□□□ -0.36
UBE2E3-201ENST00000392415 C9orf116Q5BN46 136 aaPredicted RBP12.82□□□□□ -0.36
UBE2E3-201ENST00000392415 ERASQ7Z444 233 aa12.82□□□□□ -0.36
UBE2E3-201ENST00000392415 MRPL18Q9H0U6 180 aaKnown RBP12.82□□□□□ -0.36
UBE2E3-201ENST00000392415 FABP9Q0Z7S8 132 aa12.81□□□□□ -0.36
UBE2E3-201ENST00000392415 LINC01549A6NIU2 74 aa12.8□□□□□ -0.36
UBE2E3-201ENST00000392415 SEC11AP67812 179 aa12.8□□□□□ -0.36
UBE2E3-201ENST00000392415 SCGB3A1Q96QR1 104 aa12.8□□□□□ -0.36
UBE2E3-201ENST00000392415 TRBV30A0A0K0K1B3 111 aa12.79□□□□□ -0.36
UBE2E3-201ENST00000392415 HERVK_113P63121 156 aa12.79□□□□□ -0.36
UBE2E3-201ENST00000392415 Q6ZRP5 223 aa12.79□□□□□ -0.36
UBE2E3-201ENST00000392415 APOC3P02656 99 aa12.78□□□□□ -0.36
UBE2E3-201ENST00000392415 C2orf82Q6UX34 121 aa12.78□□□□□ -0.36
UBE2E3-201ENST00000392415 CDKN2A-AS1Q9UH64 79 aa12.77□□□□□ -0.37
UBE2E3-201ENST00000392415 TNXBP22105 4242 aa12.77□□□□□ -0.37
UBE2E3-201ENST00000392415 FA2HQ7L5A8 372 aa12.76□□□□□ -0.37
UBE2E3-201ENST00000392415 GEMIN7Q9H840 131 aaKnown RBP12.76□□□□□ -0.37
UBE2E3-201ENST00000392415 SNAPINO95295 136 aa12.75□□□□□ -0.37
UBE2E3-201ENST00000392415 MT1HL1P0DM35 61 aa12.75□□□□□ -0.37
UBE2E3-201ENST00000392415 SVBPQ8N300 66 aa12.75□□□□□ -0.37
UBE2E3-201ENST00000392415 PACRGQ96M98 296 aaPredicted RBP12.75□□□□□ -0.37
UBE2E3-201ENST00000392415 SMCO4Q9NRQ5 59 aa12.75□□□□□ -0.37
UBE2E3-201ENST00000392415 PRSS2P07478 247 aa12.74□□□□□ -0.37
UBE2E3-201ENST00000392415 NDUFA5Q16718 116 aa12.74□□□□□ -0.37
UBE2E3-201ENST00000392415 Q8IZM0 81 aa12.74□□□□□ -0.37
UBE2E3-201ENST00000392415 TOMM7Q9P0U1 55 aa12.74□□□□□ -0.37
UBE2E3-201ENST00000392415 TRAPPC1Q9Y5R8 145 aa12.74□□□□□ -0.37
UBE2E3-201ENST00000392415 NDUFC2-KCTD14E9PQ53 114 aa12.73□□□□□ -0.37
UBE2E3-201ENST00000392415 SRSF9Q13242 221 aaKnown RBP eCLIP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms