RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 LRRK2Q5S007 2527 aa10.89□□□□□ -0.67
VLDLR-202ENST00000382099 TRAV13-2A0A0B4J235 113 aa10.88□□□□□ -0.67
VLDLR-202ENST00000382099 PIEZO1Q92508 2521 aa10.88□□□□□ -0.67
VLDLR-202ENST00000382099 NBL1P41271 181 aa10.88□□□□□ -0.67
VLDLR-202ENST00000382099 CCDC168Q8NDH2 2452 aa10.88□□□□□ -0.67
VLDLR-202ENST00000382099 COX6A2Q02221 97 aa10.88□□□□□ -0.67
VLDLR-202ENST00000382099 UBL5Q9BZL1 73 aa10.88□□□□□ -0.67
VLDLR-202ENST00000382099 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.87□□□□□ -0.67
VLDLR-202ENST00000382099 SMIM11BQ8TCY0 68 aa10.87□□□□□ -0.67
VLDLR-202ENST00000382099 FAM104AQ969W3 186 aa10.87□□□□□ -0.67
VLDLR-202ENST00000382099 OVOL2Q9BRP0 275 aa10.87□□□□□ -0.67
VLDLR-202ENST00000382099 A0A1W2PRX2 142 aa10.86□□□□□ -0.67
VLDLR-202ENST00000382099 IGHV3-11P01762 117 aa10.86□□□□□ -0.67
VLDLR-202ENST00000382099 SIRPDQ9H106 197 aa10.86□□□□□ -0.67
VLDLR-202ENST00000382099 HAMPP81172 84 aa10.86□□□□□ -0.67
VLDLR-202ENST00000382099 LINC00337Q8N6G1 96 aa10.86□□□□□ -0.67
VLDLR-202ENST00000382099 LINC00467Q9BRT7 94 aa10.86□□□□□ -0.67
VLDLR-202ENST00000382099 TOMM7Q9P0U1 55 aa10.86□□□□□ -0.67
VLDLR-202ENST00000382099 Q9UF83 564 aa10.86□□□□□ -0.67
VLDLR-202ENST00000382099 SND1-IT1Q9HBX3 110 aa10.85□□□□□ -0.67
VLDLR-202ENST00000382099 RETNQ9HD89 108 aa10.85□□□□□ -0.67
VLDLR-202ENST00000382099 IGHV3-16A0A0C4DH30 117 aa10.85□□□□□ -0.67
VLDLR-202ENST00000382099 ITPR1Q14643 2758 aa10.85□□□□□ -0.67
VLDLR-202ENST00000382099 CFAP46Q8IYW2 2715 aa10.85□□□□□ -0.67
VLDLR-202ENST00000382099 PKD1L2Q7Z442 2459 aa10.85□□□□□ -0.67
VLDLR-202ENST00000382099 TRAV7A0A075B6U4 112 aa10.84□□□□□ -0.67
VLDLR-202ENST00000382099 E7EQL1 145 aa10.84□□□□□ -0.67
VLDLR-202ENST00000382099 IGHV1OR15-1A0A075B7D0 117 aa10.84□□□□□ -0.67
VLDLR-202ENST00000382099 EPM2AB3EWF7 344 aa10.84□□□□□ -0.67
VLDLR-202ENST00000382099 SNRPD3P62318 126 aaKnown RBP10.84□□□□□ -0.67
VLDLR-202ENST00000382099 Q8N9W7 124 aa10.84□□□□□ -0.67
VLDLR-202ENST00000382099 WNK1Q9H4A3 2382 aa10.84□□□□□ -0.67
VLDLR-202ENST00000382099 ORMDL1Q9P0S3 153 aa10.84□□□□□ -0.67
VLDLR-202ENST00000382099 U3KQE9 123 aa10.84□□□□□ -0.67
VLDLR-202ENST00000382099 IGFL3Q6UXB1 125 aa10.83□□□□□ -0.68
VLDLR-202ENST00000382099 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.83□□□□□ -0.68
VLDLR-202ENST00000382099 LINC00158P58513 81 aa10.83□□□□□ -0.68
VLDLR-202ENST00000382099 BLCAPP62952 87 aa10.83□□□□□ -0.68
VLDLR-202ENST00000382099 SPINK13Q1W4C9 94 aa10.82□□□□□ -0.68
VLDLR-202ENST00000382099 Q8NA96 180 aa10.82□□□□□ -0.68
VLDLR-202ENST00000382099 MOB4Q9Y3A3 225 aa10.82□□□□□ -0.68
VLDLR-202ENST00000382099 TRAV10A0A0B4J240 114 aa10.81□□□□□ -0.68
VLDLR-202ENST00000382099 KLLNB2CW77 178 aa10.81□□□□□ -0.68
VLDLR-202ENST00000382099 H0YGX0 51 aa10.81□□□□□ -0.68
VLDLR-202ENST00000382099 PAX4O43316 350 aa10.81□□□□□ -0.68
VLDLR-202ENST00000382099 PMAIP1Q13794 54 aa10.81□□□□□ -0.68
VLDLR-202ENST00000382099 ATP5EP2Q5VTU8 51 aa10.81□□□□□ -0.68
VLDLR-202ENST00000382099 RHPN1-AS1Q9BWJ2 59 aa10.81□□□□□ -0.68
VLDLR-202ENST00000382099 MINOS1Q5TGZ0 78 aa10.8□□□□□ -0.68
VLDLR-202ENST00000382099 Q6ZTI0 123 aa10.79□□□□□ -0.68
VLDLR-202ENST00000382099 CHCHD7Q9BUK0 85 aa10.79□□□□□ -0.68
VLDLR-202ENST00000382099 IGKV3OR2-268A0A0C4DH90 116 aa10.78□□□□□ -0.68
VLDLR-202ENST00000382099 PF4P02776 101 aa10.78□□□□□ -0.68
VLDLR-202ENST00000382099 FAM229BQ4G0N7 80 aa10.78□□□□□ -0.68
VLDLR-202ENST00000382099 C11orf72Q8NBR9 251 aa10.78□□□□□ -0.68
VLDLR-202ENST00000382099 KLKP1Q107X0 134 aa10.77□□□□□ -0.68
VLDLR-202ENST00000382099 APRG1Q8IVJ8 170 aa10.77□□□□□ -0.68
VLDLR-202ENST00000382099 NOTCH2Q04721 2471 aa10.77□□□□□ -0.69
VLDLR-202ENST00000382099 SMIM1B2RUZ4 78 aa10.77□□□□□ -0.69
VLDLR-202ENST00000382099 IGKV2-28A0A075B6P5 120 aa10.77□□□□□ -0.69
VLDLR-202ENST00000382099 A0A087WZ39 114 aa10.77□□□□□ -0.69
VLDLR-202ENST00000382099 IGKV2D-28P01615 120 aa10.77□□□□□ -0.69
VLDLR-202ENST00000382099 LINC00242Q5T6M2 205 aa10.77□□□□□ -0.69
VLDLR-202ENST00000382099 PRM2P04554 102 aa10.76□□□□□ -0.69
VLDLR-202ENST00000382099 OBSCN-AS1Q96MR7 158 aa10.76□□□□□ -0.69
VLDLR-202ENST00000382099 EPG5Q9HCE0 2579 aa10.76□□□□□ -0.69
VLDLR-202ENST00000382099 IGHV3OR16-12A0A075B7B8 117 aa10.76□□□□□ -0.69
VLDLR-202ENST00000382099 C19orf54Q5BKX5 351 aa10.75□□□□□ -0.69
VLDLR-202ENST00000382099 Q8N6K4 173 aa10.75□□□□□ -0.69
VLDLR-202ENST00000382099 IGLV5-39A0A0G2JS06 123 aa10.74□□□□□ -0.69
VLDLR-202ENST00000382099 C11orf68Q9H3H3 251 aaKnown RBP10.74□□□□□ -0.69
VLDLR-202ENST00000382099 LRCOL1A6NCL2 159 aa10.73□□□□□ -0.69
VLDLR-202ENST00000382099 JMJD7-PLA2G4BH0Y9G9 81 aa10.73□□□□□ -0.69
VLDLR-202ENST00000382099 MIFP14174 115 aa10.73□□□□□ -0.69
VLDLR-202ENST00000382099 SCXQ7RTU7 201 aa10.73□□□□□ -0.69
VLDLR-202ENST00000382099 NAV2Q8IVL1 2488 aa10.73□□□□□ -0.69
VLDLR-202ENST00000382099 ODF3BA8MYP8 253 aa10.73□□□□□ -0.69
VLDLR-202ENST00000382099 Q6ZSN1 163 aa10.73□□□□□ -0.69
VLDLR-202ENST00000382099 ABCA2Q9BZC7 2435 aa10.72□□□□□ -0.69
VLDLR-202ENST00000382099 TM2D3Q9BRN9 247 aa10.72□□□□□ -0.69
VLDLR-202ENST00000382099 NDUFA4O00483 81 aa10.71□□□□□ -0.69
VLDLR-202ENST00000382099 MTORP42345 2549 aa10.7□□□□□ -0.7
VLDLR-202ENST00000382099 IGLV5-45A0A087WSX0 123 aa10.7□□□□□ -0.7
VLDLR-202ENST00000382099 CCL18P55774 89 aa10.7□□□□□ -0.7
VLDLR-202ENST00000382099 FBN2P35556 2912 aa10.7□□□□□ -0.7
VLDLR-202ENST00000382099 SAA4P35542 130 aa10.69□□□□□ -0.7
VLDLR-202ENST00000382099 C6orf226Q5I0X4 101 aa10.69□□□□□ -0.7
VLDLR-202ENST00000382099 TRBV10-3A0A0K0K1G6 114 aa10.69□□□□□ -0.7
VLDLR-202ENST00000382099 Q8N3U1 123 aa10.69□□□□□ -0.7
VLDLR-202ENST00000382099 ZNF462Q96JM2 2506 aa10.69□□□□□ -0.7
VLDLR-202ENST00000382099 NDUFC1O43677 76 aa10.68□□□□□ -0.7
VLDLR-202ENST00000382099 LAMTOR3Q9UHA4 124 aa10.68□□□□□ -0.7
VLDLR-202ENST00000382099 DAD1P61803 113 aa10.68□□□□□ -0.7
VLDLR-202ENST00000382099 NF1P21359 2839 aa10.68□□□□□ -0.7
VLDLR-202ENST00000382099 LINC01547P58512 204 aaPredicted RBP10.67□□□□□ -0.7
VLDLR-202ENST00000382099 JMJD1CQ15652 2540 aa10.67□□□□□ -0.7
VLDLR-202ENST00000382099 ACANP16112 2415 aa10.66□□□□□ -0.7
VLDLR-202ENST00000382099 TMEM256-PLSCR3K7ERE1 68 aa10.66□□□□□ -0.7
VLDLR-202ENST00000382099 ATP5EP56381 51 aaPredicted RBP10.66□□□□□ -0.7
VLDLR-202ENST00000382099 Q96MF0 132 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms