RNA–Protein interactions for RNA: ENST00000381800.3

LOH12CR2-201, Transcript of loss of heterozygosity, 12, chromosomal region 2, humanhuman

TSL 1 (best) BASIC

Gene LOH12CR2, Length 1,540 nt, Biotype lincRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LOH12CR2-201ENST00000381800 SPCS1Q9Y6A9 102 aa11.29□□□□□ -0.6
LOH12CR2-201ENST00000381800 FLNBO75369 2602 aaKnown RBP11.28□□□□□ -0.6
LOH12CR2-201ENST00000381800 TRAV13-1A0A0B4J241 112 aa11.28□□□□□ -0.6
LOH12CR2-201ENST00000381800 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.26□□□□□ -0.61
LOH12CR2-201ENST00000381800 A0A0B4J2C4 111 aa11.26□□□□□ -0.61
LOH12CR2-201ENST00000381800 IFITM1P13164 125 aa11.26□□□□□ -0.61
LOH12CR2-201ENST00000381800 KRTAP10-11P60412 298 aa11.26□□□□□ -0.61
LOH12CR2-201ENST00000381800 PPDPFQ9H3Y8 114 aa11.26□□□□□ -0.61
LOH12CR2-201ENST00000381800 OXLD1Q5BKU9 147 aa11.25□□□□□ -0.61
LOH12CR2-201ENST00000381800 IGLV4-60A0A075B6I1 120 aa11.25□□□□□ -0.61
LOH12CR2-201ENST00000381800 CFC1BP0CG36 223 aa11.25□□□□□ -0.61
LOH12CR2-201ENST00000381800 CFC1P0CG37 223 aa11.25□□□□□ -0.61
LOH12CR2-201ENST00000381800 HERV-K104P63124 156 aa11.25□□□□□ -0.61
LOH12CR2-201ENST00000381800 MIAQ16674 131 aa11.25□□□□□ -0.61
LOH12CR2-201ENST00000381800 NAA38Q9BRA0 125 aaKnown RBP11.25□□□□□ -0.61
LOH12CR2-201ENST00000381800 CELA1Q9UNI1 258 aa11.25□□□□□ -0.61
LOH12CR2-201ENST00000381800 MUSTN1Q8IVN3 82 aa11.24□□□□□ -0.61
LOH12CR2-201ENST00000381800 LINC01561Q8N1V8 128 aa11.24□□□□□ -0.61
LOH12CR2-201ENST00000381800 CIRBPQ14011 172 aaKnown RBP11.23□□□□□ -0.61
LOH12CR2-201ENST00000381800 MRPL23Q16540 153 aaKnown RBP11.23□□□□□ -0.61
LOH12CR2-201ENST00000381800 LYRM7Q5U5X0 104 aa11.23□□□□□ -0.61
LOH12CR2-201ENST00000381800 PRIMA1Q86XR5 153 aa11.23□□□□□ -0.61
LOH12CR2-201ENST00000381800 ZNF625Q96I27 306 aaPredicted RBP11.23□□□□□ -0.61
LOH12CR2-201ENST00000381800 PGPEP1Q9NXJ5 209 aa11.23□□□□□ -0.61
LOH12CR2-201ENST00000381800 CBY1Q9Y3M2 126 aa11.23□□□□□ -0.61
LOH12CR2-201ENST00000381800 IGHV3OR16-9A0A0B4J2B5 98 aa11.22□□□□□ -0.61
LOH12CR2-201ENST00000381800 A4D1N5 150 aa11.22□□□□□ -0.61
LOH12CR2-201ENST00000381800 DEFB4AO15263 64 aa11.22□□□□□ -0.61
LOH12CR2-201ENST00000381800 C11orf68Q9H3H3 251 aaKnown RBP11.22□□□□□ -0.61
LOH12CR2-201ENST00000381800 PRO1854Q9UHT4 67 aa11.22□□□□□ -0.61
LOH12CR2-201ENST00000381800 H3BNG1 76 aa11.21□□□□□ -0.61
LOH12CR2-201ENST00000381800 TSPAN13O95857 204 aa11.21□□□□□ -0.61
LOH12CR2-201ENST00000381800 RBX1P62877 108 aa11.21□□□□□ -0.61
LOH12CR2-201ENST00000381800 COPS9Q8WXC6 57 aa11.21□□□□□ -0.61
LOH12CR2-201ENST00000381800 A0A087WZ39 114 aa11.2□□□□□ -0.62
LOH12CR2-201ENST00000381800 LINC00959A0A1B0GUT2 108 aa11.2□□□□□ -0.62
LOH12CR2-201ENST00000381800 APOMO95445 188 aa11.2□□□□□ -0.62
LOH12CR2-201ENST00000381800 SFTA2Q6UW10 78 aa11.2□□□□□ -0.62
LOH12CR2-201ENST00000381800 Q9H8V8 135 aa11.2□□□□□ -0.62
LOH12CR2-201ENST00000381800 ADAMTSL4-AS1Q5T5F5 129 aa11.19□□□□□ -0.62
LOH12CR2-201ENST00000381800 ICOSQ9Y6W8 199 aa11.19□□□□□ -0.62
LOH12CR2-201ENST00000381800 SS18Q15532 418 aa11.18□□□□□ -0.62
LOH12CR2-201ENST00000381800 LELP1Q5T871 98 aa11.18□□□□□ -0.62
LOH12CR2-201ENST00000381800 IGHV3-33P01772 117 aa11.17□□□□□ -0.62
LOH12CR2-201ENST00000381800 COX7B2Q8TF08 81 aa11.17□□□□□ -0.62
LOH12CR2-201ENST00000381800 TMEM262E9PQX1 116 aa11.16□□□□□ -0.62
LOH12CR2-201ENST00000381800 TRBV20-1A0A075B6N2 111 aa11.15□□□□□ -0.62
LOH12CR2-201ENST00000381800 F8W1H4 67 aa11.15□□□□□ -0.62
LOH12CR2-201ENST00000381800 EIF4EBP3O60516 100 aaPredicted RBP11.15□□□□□ -0.62
LOH12CR2-201ENST00000381800 PRSS2P07478 247 aa11.15□□□□□ -0.62
LOH12CR2-201ENST00000381800 ERG28Q9UKR5 140 aa11.14□□□□□ -0.63
LOH12CR2-201ENST00000381800 A0A096LPF7 62 aa11.14□□□□□ -0.63
LOH12CR2-201ENST00000381800 CYSRT1A8MQ03 144 aa11.13□□□□□ -0.63
LOH12CR2-201ENST00000381800 SMCPP49901 116 aaPredicted RBP11.13□□□□□ -0.63
LOH12CR2-201ENST00000381800 LINC00308Q8TCZ7 52 aa11.13□□□□□ -0.63
LOH12CR2-201ENST00000381800 TRRAPQ9Y4A5 3859 aa11.13□□□□□ -0.63
LOH12CR2-201ENST00000381800 TRBV30A0A0K0K1B3 111 aa11.11□□□□□ -0.63
LOH12CR2-201ENST00000381800 MEIG1Q5JSS6 88 aa11.11□□□□□ -0.63
LOH12CR2-201ENST00000381800 CD164L2Q6UWJ8 174 aa11.11□□□□□ -0.63
LOH12CR2-201ENST00000381800 IGKV3OR2-268A0A0C4DH90 116 aa11.1□□□□□ -0.63
LOH12CR2-201ENST00000381800 G3V4G9 280 aa11.1□□□□□ -0.63
LOH12CR2-201ENST00000381800 OCIAD2Q56VL3 154 aa11.1□□□□□ -0.63
LOH12CR2-201ENST00000381800 Q8IZM0 81 aa11.1□□□□□ -0.63
LOH12CR2-201ENST00000381800 PRO0461Q9UI25 63 aa11.1□□□□□ -0.63
LOH12CR2-201ENST00000381800 NBEAL2Q6ZNJ1 2754 aa11.1□□□□□ -0.63
LOH12CR2-201ENST00000381800 LOC107984156A0A0G2JMH3 177 aa11.09□□□□□ -0.63
LOH12CR2-201ENST00000381800 IBA57-AS1B1ANH7 110 aa11.09□□□□□ -0.63
LOH12CR2-201ENST00000381800 HTN3P15516 51 aa11.09□□□□□ -0.63
LOH12CR2-201ENST00000381800 ARL17AQ8IVW1 177 aa11.09□□□□□ -0.63
LOH12CR2-201ENST00000381800 BAHCC1Q9P281 2608 aa11.09□□□□□ -0.63
LOH12CR2-201ENST00000381800 H3BMG7 143 aa11.09□□□□□ -0.63
LOH12CR2-201ENST00000381800 RETNQ9HD89 108 aa11.09□□□□□ -0.63
LOH12CR2-201ENST00000381800 K7ERU9 68 aa11.08□□□□□ -0.64
LOH12CR2-201ENST00000381800 REG3AQ06141 175 aa11.08□□□□□ -0.64
LOH12CR2-201ENST00000381800 LYPD5Q6UWN5 251 aa11.08□□□□□ -0.64
LOH12CR2-201ENST00000381800 C5orf38Q86SI9 138 aa11.08□□□□□ -0.64
LOH12CR2-201ENST00000381800 LINC00269Q8N2A0 174 aa11.08□□□□□ -0.64
LOH12CR2-201ENST00000381800 PRR34Q9NV39 138 aa11.08□□□□□ -0.64
LOH12CR2-201ENST00000381800 DNAH3Q8TD57 4116 aa11.07□□□□□ -0.64
LOH12CR2-201ENST00000381800 ANGP03950 147 aaKnown RBP11.06□□□□□ -0.64
LOH12CR2-201ENST00000381800 CXCL5P42830 114 aa11.06□□□□□ -0.64
LOH12CR2-201ENST00000381800 XCL1P47992 114 aa11.06□□□□□ -0.64
LOH12CR2-201ENST00000381800 CHCHD10Q8WYQ3 142 aaPredicted RBP11.06□□□□□ -0.64
LOH12CR2-201ENST00000381800 TOMM7Q9P0U1 55 aa11.06□□□□□ -0.64
LOH12CR2-201ENST00000381800 CMYA5Q8N3K9 4069 aa11.06□□□□□ -0.64
LOH12CR2-201ENST00000381800 FBN1P35555 2871 aaKnown RBP11.06□□□□□ -0.64
LOH12CR2-201ENST00000381800 STAB1Q9NY15 2570 aa11.05□□□□□ -0.64
LOH12CR2-201ENST00000381800 COX7A2LO14548 114 aa11.05□□□□□ -0.64
LOH12CR2-201ENST00000381800 KPRPQ5T749 579 aaPredicted RBP11.05□□□□□ -0.64
LOH12CR2-201ENST00000381800 SOSTDC1Q6X4U4 206 aa11.05□□□□□ -0.64
LOH12CR2-201ENST00000381800 M0QXV9 152 aa11.04□□□□□ -0.64
LOH12CR2-201ENST00000381800 TCL1BO95988 128 aa11.04□□□□□ -0.64
LOH12CR2-201ENST00000381800 SCGB1C2P0DMR2 95 aa11.04□□□□□ -0.64
LOH12CR2-201ENST00000381800 PSMB2P49721 201 aa11.04□□□□□ -0.64
LOH12CR2-201ENST00000381800 DAND5Q8N907 189 aa11.04□□□□□ -0.64
LOH12CR2-201ENST00000381800 SPATA25Q9BR10 227 aa11.04□□□□□ -0.64
LOH12CR2-201ENST00000381800 Q1RN00 199 aa11.04□□□□□ -0.64
LOH12CR2-201ENST00000381800 C6orf226Q5I0X4 101 aa11.04□□□□□ -0.64
LOH12CR2-201ENST00000381800 Q6ZTC4 211 aa11.04□□□□□ -0.64
LOH12CR2-201ENST00000381800 LINC01600Q96MT4 127 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms