RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 IBA57-AS1B1ANH7 110 aa9.16□□□□□ -0.94
CHD3-203ENST00000380358 LINC01006Q8NI28 216 aa9.16□□□□□ -0.94
CHD3-203ENST00000380358 MRPS12O15235 138 aaKnown RBP9.16□□□□□ -0.94
CHD3-203ENST00000380358 EBI3Q14213 229 aa9.16□□□□□ -0.94
CHD3-203ENST00000380358 IGFL2Q6UWQ7 119 aa9.16□□□□□ -0.94
CHD3-203ENST00000380358 LINC00959A0A1B0GUT2 108 aa9.15□□□□□ -0.94
CHD3-203ENST00000380358 C19orf71A6NCJ1 209 aa9.15□□□□□ -0.94
CHD3-203ENST00000380358 CRYGAP11844 174 aa9.15□□□□□ -0.94
CHD3-203ENST00000380358 ABCA2Q9BZC7 2435 aa9.15□□□□□ -0.94
CHD3-203ENST00000380358 IGLV3-1P01715 115 aa9.15□□□□□ -0.94
CHD3-203ENST00000380358 HIGD1BQ9P298 99 aa9.15□□□□□ -0.94
CHD3-203ENST00000380358 PMAIP1Q13794 54 aa9.15□□□□□ -0.95
CHD3-203ENST00000380358 PYGO1Q9Y3Y4 419 aa9.15□□□□□ -0.95
CHD3-203ENST00000380358 PLXNA2O75051 1894 aa9.14□□□□□ -0.95
CHD3-203ENST00000380358 EDN2P20800 178 aa9.14□□□□□ -0.95
CHD3-203ENST00000380358 REG3GQ6UW15 175 aa9.14□□□□□ -0.95
CHD3-203ENST00000380358 ZNF73O43830 326 aaPredicted RBP9.14□□□□□ -0.95
CHD3-203ENST00000380358 CYSRT1A8MQ03 144 aa9.14□□□□□ -0.95
CHD3-203ENST00000380358 C10orf91Q5T1B1 145 aa9.14□□□□□ -0.95
CHD3-203ENST00000380358 UQCRQO14949 82 aa9.14□□□□□ -0.95
CHD3-203ENST00000380358 CD164L2Q6UWJ8 174 aa9.14□□□□□ -0.95
CHD3-203ENST00000380358 LELP1Q5T871 98 aa9.13□□□□□ -0.95
CHD3-203ENST00000380358 LINC00474Q9P2X8 69 aa9.13□□□□□ -0.95
CHD3-203ENST00000380358 AGRNO00468 2067 aa9.13□□□□□ -0.95
CHD3-203ENST00000380358 C1orf134Q5TEV5 83 aa9.12□□□□□ -0.95
CHD3-203ENST00000380358 UNQ6190/PRO20217Q6UXQ8 127 aa9.12□□□□□ -0.95
CHD3-203ENST00000380358 SPACA4Q8TDM5 124 aa9.12□□□□□ -0.95
CHD3-203ENST00000380358 NOTCH2Q04721 2471 aa9.12□□□□□ -0.95
CHD3-203ENST00000380358 C2orf48Q96LS8 159 aa9.12□□□□□ -0.95
CHD3-203ENST00000380358 CUL9Q8IWT3 2517 aa9.12□□□□□ -0.95
CHD3-203ENST00000380358 IGLV8-61A0A075B6I0 122 aa9.12□□□□□ -0.95
CHD3-203ENST00000380358 M0QY20 66 aa9.12□□□□□ -0.95
CHD3-203ENST00000380358 C7orf65Q6ZTY9 151 aa9.11□□□□□ -0.95
CHD3-203ENST00000380358 COX6A2Q02221 97 aa9.11□□□□□ -0.95
CHD3-203ENST00000380358 C1orf195Q5TG92 126 aa9.11□□□□□ -0.95
CHD3-203ENST00000380358 ZNF702PQ9H963 129 aa9.11□□□□□ -0.95
CHD3-203ENST00000380358 TRBV6-4A0A1B0GX49 114 aa9.1□□□□□ -0.95
CHD3-203ENST00000380358 A0A1B0GXF2 115 aa9.1□□□□□ -0.95
CHD3-203ENST00000380358 Q9BRP9 147 aa9.1□□□□□ -0.95
CHD3-203ENST00000380358 H7C423 109 aa9.1□□□□□ -0.95
CHD3-203ENST00000380358 Q6ZTC4 211 aa9.1□□□□□ -0.95
CHD3-203ENST00000380358 LRRC75A-AS1Q8N1F1 130 aa9.1□□□□□ -0.95
CHD3-203ENST00000380358 SPRY4Q9C004 299 aa9.1□□□□□ -0.95
CHD3-203ENST00000380358 RAI1Q7Z5J4 1906 aaPredicted RBP9.09□□□□□ -0.95
CHD3-203ENST00000380358 ODF3BA8MYP8 253 aa9.09□□□□□ -0.95
CHD3-203ENST00000380358 CCDC168Q8NDH2 2452 aa9.09□□□□□ -0.95
CHD3-203ENST00000380358 U3KQK5 164 aa9.09□□□□□ -0.95
CHD3-203ENST00000380358 C1orf229Q6ZS94 237 aaPredicted RBP9.08□□□□□ -0.96
CHD3-203ENST00000380358 SIP14410 1827 aa9.08□□□□□ -0.96
CHD3-203ENST00000380358 RNASE3P12724 160 aaKnown RBP9.08□□□□□ -0.96
CHD3-203ENST00000380358 BDP1A6H8Y1 2624 aa9.08□□□□□ -0.96
CHD3-203ENST00000380358 CCDC179H3BU77 68 aa9.07□□□□□ -0.96
CHD3-203ENST00000380358 A8MTW9 85 aa9.07□□□□□ -0.96
CHD3-203ENST00000380358 CSDC2Q9Y534 153 aaKnown RBP9.06□□□□□ -0.96
CHD3-203ENST00000380358 MBD6Q96DN6 1003 aa9.06□□□□□ -0.96
CHD3-203ENST00000380358 CRIP1P50238 77 aa9.06□□□□□ -0.96
CHD3-203ENST00000380358 PCNX3Q9H6A9 2034 aa9.06□□□□□ -0.96
CHD3-203ENST00000380358 TRBV10-3A0A0K0K1G6 114 aa9.05□□□□□ -0.96
CHD3-203ENST00000380358 TSHBP01222 138 aa9.05□□□□□ -0.96
CHD3-203ENST00000380358 NAV3Q8IVL0 2385 aa9.05□□□□□ -0.96
CHD3-203ENST00000380358 TRBV30A0A0K0K1B3 111 aa9.05□□□□□ -0.96
CHD3-203ENST00000380358 HCG22E2RYF7 251 aa9.05□□□□□ -0.96
CHD3-203ENST00000380358 H0Y9P7 68 aa9.05□□□□□ -0.96
CHD3-203ENST00000380358 A0A087WSZ3 146 aa9.05□□□□□ -0.96
CHD3-203ENST00000380358 PRR9Q5T870 116 aa9.04□□□□□ -0.96
CHD3-203ENST00000380358 MRGPRG-AS1Q2M3A8 158 aa9.04□□□□□ -0.96
CHD3-203ENST00000380358 A0A087WVE0 104 aa9.03□□□□□ -0.96
CHD3-203ENST00000380358 LINC00694P0DN24 101 aa9.03□□□□□ -0.96
CHD3-203ENST00000380358 KRTAP10-9P60411 292 aa9.03□□□□□ -0.96
CHD3-203ENST00000380358 NUP210Q8TEM1 1887 aaPredicted RBP9.03□□□□□ -0.96
CHD3-203ENST00000380358 ATP5EP2Q5VTU8 51 aa9.02□□□□□ -0.97
CHD3-203ENST00000380358 GAS8-AS1O95177 125 aa9.02□□□□□ -0.97
CHD3-203ENST00000380358 KRTAP27-1Q3LI81 207 aa9.02□□□□□ -0.97
CHD3-203ENST00000380358 ODF3Q96PU9 254 aa9.01□□□□□ -0.97
CHD3-203ENST00000380358 EML5Q05BV3 1969 aa9.01□□□□□ -0.97
CHD3-203ENST00000380358 LINC00575Q6W349 94 aa9.01□□□□□ -0.97
CHD3-203ENST00000380358 RNF185Q96GF1 192 aa9.01□□□□□ -0.97
CHD3-203ENST00000380358 NUP210LQ5VU65 1888 aa9.01□□□□□ -0.97
CHD3-203ENST00000380358 CHTF8P0CG12 524 aa9.01□□□□□ -0.97
CHD3-203ENST00000380358 COL4A3Q01955 1670 aa9.01□□□□□ -0.97
CHD3-203ENST00000380358 J3QL48 77 aa9□□□□□ -0.97
CHD3-203ENST00000380358 CEP192Q8TEP8 1941 aa9□□□□□ -0.97
CHD3-203ENST00000380358 A0A087WYN8 130 aa9□□□□□ -0.97
CHD3-203ENST00000380358 TANC1Q9C0D5 1861 aa9□□□□□ -0.97
CHD3-203ENST00000380358 SPINT4Q6UDR6 99 aa9□□□□□ -0.97
CHD3-203ENST00000380358 IGLV4-60A0A075B6I1 120 aa8.99□□□□□ -0.97
CHD3-203ENST00000380358 NDUFC1O43677 76 aa8.99□□□□□ -0.97
CHD3-203ENST00000380358 PSMG3-AS1Q96PY0 264 aa8.99□□□□□ -0.97
CHD3-203ENST00000380358 SRCAPQ6ZRS2 3230 aa8.98□□□□□ -0.97
CHD3-203ENST00000380358 hDV103S1A0JD37 113 aa8.98□□□□□ -0.97
CHD3-203ENST00000380358 NTM-AS1Q6ZSK4 140 aa8.97□□□□□ -0.97
CHD3-203ENST00000380358 LINC00242Q5T6M2 205 aa8.97□□□□□ -0.97
CHD3-203ENST00000380358 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.97□□□□□ -0.97
CHD3-203ENST00000380358 TRBV7-7A0A0K0K1E9 115 aa8.97□□□□□ -0.97
CHD3-203ENST00000380358 CDSNQ15517 529 aa8.96□□□□□ -0.97
CHD3-203ENST00000380358 ATP5EP56381 51 aaPredicted RBP8.96□□□□□ -0.98
CHD3-203ENST00000380358 FBXL19-AS1Q494R0 122 aa8.96□□□□□ -0.98
CHD3-203ENST00000380358 COX6B2Q6YFQ2 88 aa8.95□□□□□ -0.98
CHD3-203ENST00000380358 CDC42SE2Q9NRR3 84 aa8.95□□□□□ -0.98
CHD3-203ENST00000380358 MOBPQ13875 183 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms