RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 AP5S1Q9NUS5 200 aa12.08□□□□□ -0.48
TMEM88B-201ENST00000378821 CYSLTR1Q9Y271 337 aa12.08□□□□□ -0.48
TMEM88B-201ENST00000378821 GVQW2A0A096LPI5 108 aaPredicted RBP12.07□□□□□ -0.48
TMEM88B-201ENST00000378821 YPEL4Q96NS1 127 aa12.07□□□□□ -0.48
TMEM88B-201ENST00000378821 IGHV1-58A0A0C4DH39 117 aa12.06□□□□□ -0.48
TMEM88B-201ENST00000378821 IFITM10A6NMD0 228 aa12.06□□□□□ -0.48
TMEM88B-201ENST00000378821 RPL37AP61513 92 aaKnown RBP12.06□□□□□ -0.48
TMEM88B-201ENST00000378821 TRAPPC1Q9Y5R8 145 aa12.06□□□□□ -0.48
TMEM88B-201ENST00000378821 LRP1Q07954 4544 aaKnown RBP12.06□□□□□ -0.48
TMEM88B-201ENST00000378821 IGHV3-64A0A075B6Q5 118 aa12.05□□□□□ -0.48
TMEM88B-201ENST00000378821 PRSS3P2Q8NHM4 247 aa12.05□□□□□ -0.48
TMEM88B-201ENST00000378821 TMEM141Q96I45 108 aa12.05□□□□□ -0.48
TMEM88B-201ENST00000378821 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.04□□□□□ -0.48
TMEM88B-201ENST00000378821 COX7A2LO14548 114 aa12.04□□□□□ -0.48
TMEM88B-201ENST00000378821 CBLN2Q8IUK8 224 aa12.03□□□□□ -0.48
TMEM88B-201ENST00000378821 LINC00526Q96FQ7 95 aa12.03□□□□□ -0.48
TMEM88B-201ENST00000378821 LINC01546A6NGU7 62 aa12.02□□□□□ -0.49
TMEM88B-201ENST00000378821 IGIPA6NJ69 53 aa12.02□□□□□ -0.49
TMEM88B-201ENST00000378821 ZC2HC1BQ5TFG8 222 aa12.02□□□□□ -0.49
TMEM88B-201ENST00000378821 LINC00173Q6ZV60 143 aa12.02□□□□□ -0.49
TMEM88B-201ENST00000378821 C5orf38Q86SI9 138 aa12.02□□□□□ -0.49
TMEM88B-201ENST00000378821 PKHD1L1Q86WI1 4243 aa12.02□□□□□ -0.49
TMEM88B-201ENST00000378821 MALP21145 153 aa12.01□□□□□ -0.49
TMEM88B-201ENST00000378821 HNRNPA3P51991 378 aaKnown RBP12.01□□□□□ -0.49
TMEM88B-201ENST00000378821 TEX43Q6ZNM6 134 aa12.01□□□□□ -0.49
TMEM88B-201ENST00000378821 SPACA4Q8TDM5 124 aa12.01□□□□□ -0.49
TMEM88B-201ENST00000378821 TOMM6Q96B49 74 aa12.01□□□□□ -0.49
TMEM88B-201ENST00000378821 FAT3Q8TDW7 4589 aa12□□□□□ -0.49
TMEM88B-201ENST00000378821 FA2HQ7L5A8 372 aa12□□□□□ -0.49
TMEM88B-201ENST00000378821 C18orf32Q8TCD1 76 aa12□□□□□ -0.49
TMEM88B-201ENST00000378821 AMELXQ99217 191 aa12□□□□□ -0.49
TMEM88B-201ENST00000378821 IGHV3OR16-9A0A0B4J2B5 98 aa11.99□□□□□ -0.49
TMEM88B-201ENST00000378821 NPSP0C0P6 89 aa11.99□□□□□ -0.49
TMEM88B-201ENST00000378821 G0S2P27469 103 aa11.99□□□□□ -0.49
TMEM88B-201ENST00000378821 Q6ZN92 141 aa11.99□□□□□ -0.49
TMEM88B-201ENST00000378821 TIMM17AQ99595 171 aa11.99□□□□□ -0.49
TMEM88B-201ENST00000378821 SMCO4Q9NRQ5 59 aa11.99□□□□□ -0.49
TMEM88B-201ENST00000378821 PLAC8Q9NZF1 115 aa11.99□□□□□ -0.49
TMEM88B-201ENST00000378821 A0A087WYN8 130 aa11.98□□□□□ -0.49
TMEM88B-201ENST00000378821 UBE2D1P51668 147 aa11.98□□□□□ -0.49
TMEM88B-201ENST00000378821 LINC00242Q5T6M2 205 aa11.98□□□□□ -0.49
TMEM88B-201ENST00000378821 C2orf88Q9BSF0 95 aa11.98□□□□□ -0.49
TMEM88B-201ENST00000378821 ZNF561-AS1K7EIQ3 104 aa11.97□□□□□ -0.49
TMEM88B-201ENST00000378821 CHTF8P0CG12 524 aa11.97□□□□□ -0.49
TMEM88B-201ENST00000378821 COX6A2Q02221 97 aa11.97□□□□□ -0.49
TMEM88B-201ENST00000378821 SERTAD4-AS1Q5TG53 156 aa11.97□□□□□ -0.49
TMEM88B-201ENST00000378821 URB1-AS1Q96HZ7 61 aa11.97□□□□□ -0.49
TMEM88B-201ENST00000378821 VCX2Q9H322 139 aa11.97□□□□□ -0.49
TMEM88B-201ENST00000378821 IGLV4-69A0A075B6H9 119 aa11.96□□□□□ -0.49
TMEM88B-201ENST00000378821 CARD19Q96LW7 228 aa11.96□□□□□ -0.49
TMEM88B-201ENST00000378821 SCGB3A1Q96QR1 104 aa11.96□□□□□ -0.49
TMEM88B-201ENST00000378821 APOMO95445 188 aa11.95□□□□□ -0.5
TMEM88B-201ENST00000378821 ERASQ7Z444 233 aa11.95□□□□□ -0.5
TMEM88B-201ENST00000378821 SPAG11BQ08648 103 aa11.94□□□□□ -0.5
TMEM88B-201ENST00000378821 SYCNQ0VAF6 134 aa11.94□□□□□ -0.5
TMEM88B-201ENST00000378821 PAPPA-AS1Q5QFB9 102 aa11.94□□□□□ -0.5
TMEM88B-201ENST00000378821 ORAOV1Q8WV07 137 aa11.94□□□□□ -0.5
TMEM88B-201ENST00000378821 A0A096LNJ9 63 aa11.93□□□□□ -0.5
TMEM88B-201ENST00000378821 Q6ZRU5 148 aa11.93□□□□□ -0.5
TMEM88B-201ENST00000378821 OR10D4PQ8NGN7 298 aa11.93□□□□□ -0.5
TMEM88B-201ENST00000378821 A0A087WZ39 114 aa11.92□□□□□ -0.5
TMEM88B-201ENST00000378821 LINC01549A6NIU2 74 aa11.92□□□□□ -0.5
TMEM88B-201ENST00000378821 LINC00614P0C842 121 aa11.92□□□□□ -0.5
TMEM88B-201ENST00000378821 FAM19A3Q7Z5A8 133 aa11.92□□□□□ -0.5
TMEM88B-201ENST00000378821 DPH3Q96FX2 82 aa11.92□□□□□ -0.5
TMEM88B-201ENST00000378821 C2orf48Q96LS8 159 aa11.91□□□□□ -0.5
TMEM88B-201ENST00000378821 CAMK2N2Q96S95 79 aa11.91□□□□□ -0.5
TMEM88B-201ENST00000378821 MT1HL1P0DM35 61 aa11.89□□□□□ -0.51
TMEM88B-201ENST00000378821 PMCHL1Q16048 86 aa11.89□□□□□ -0.51
TMEM88B-201ENST00000378821 A0A096LNI7 61 aa11.88□□□□□ -0.51
TMEM88B-201ENST00000378821 IGKV2-24A0A0C4DH68 120 aa11.88□□□□□ -0.51
TMEM88B-201ENST00000378821 A0A0J9YXV3 536 aa11.88□□□□□ -0.51
TMEM88B-201ENST00000378821 HBDP02042 147 aa11.88□□□□□ -0.51
TMEM88B-201ENST00000378821 RAB5BP61020 215 aa11.88□□□□□ -0.51
TMEM88B-201ENST00000378821 HERVK_113P63121 156 aa11.87□□□□□ -0.51
TMEM88B-201ENST00000378821 MAJINQ3KP22 176 aa11.87□□□□□ -0.51
TMEM88B-201ENST00000378821 LINC01561Q8N1V8 128 aa11.87□□□□□ -0.51
TMEM88B-201ENST00000378821 LINC00474Q9P2X8 69 aa11.87□□□□□ -0.51
TMEM88B-201ENST00000378821 TRGC2P03986 189 aa11.86□□□□□ -0.51
TMEM88B-201ENST00000378821 SEC11AP67812 179 aa11.86□□□□□ -0.51
TMEM88B-201ENST00000378821 KIAA0087Q14695 138 aa11.86□□□□□ -0.51
TMEM88B-201ENST00000378821 C7orf33Q8WU49 177 aa11.86□□□□□ -0.51
TMEM88B-201ENST00000378821 CST9LQ9H4G1 147 aa11.86□□□□□ -0.51
TMEM88B-201ENST00000378821 CDKN2A-AS1Q9UH64 79 aa11.86□□□□□ -0.51
TMEM88B-201ENST00000378821 PKIGQ9Y2B9 76 aa11.86□□□□□ -0.51
TMEM88B-201ENST00000378821 HMCN2Q8NDA2 5059 aa11.86□□□□□ -0.51
TMEM88B-201ENST00000378821 COLCA2A8K830 154 aa11.85□□□□□ -0.51
TMEM88B-201ENST00000378821 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.85□□□□□ -0.51
TMEM88B-201ENST00000378821 PMVKQ15126 192 aa11.85□□□□□ -0.51
TMEM88B-201ENST00000378821 PDZD11Q5EBL8 140 aa11.85□□□□□ -0.51
TMEM88B-201ENST00000378821 STPG4Q8N801 248 aa11.85□□□□□ -0.51
TMEM88B-201ENST00000378821 GEMIN7Q9H840 131 aaKnown RBP11.85□□□□□ -0.51
TMEM88B-201ENST00000378821 LOC107984640A0A0U1RRK4 108 aa11.84□□□□□ -0.51
TMEM88B-201ENST00000378821 F8WDY8 70 aa11.84□□□□□ -0.51
TMEM88B-201ENST00000378821 NDUFA1O15239 70 aa11.84□□□□□ -0.51
TMEM88B-201ENST00000378821 C10orf25Q5T742 122 aa11.84□□□□□ -0.51
TMEM88B-201ENST00000378821 MRPL35Q9NZE8 188 aaKnown RBP11.84□□□□□ -0.51
TMEM88B-201ENST00000378821 TINCRA0A1B0GVN0 87 aa11.83□□□□□ -0.52
TMEM88B-201ENST00000378821 SCO1O75880 301 aa11.83□□□□□ -0.52
TMEM88B-201ENST00000378821 UNQ6190/PRO20217Q6UXQ8 127 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms