RNA–Protein interactions for RNA: ENST00000377759.8

SNX5-201, Transcript of sorting nexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX5, Length 2,270 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-201ENST00000377759 UBE2L6O14933 153 aa16.93■□□□□ 0.3
SNX5-201ENST00000377759 LY6G6DO95868 133 aa16.92■□□□□ 0.3
SNX5-201ENST00000377759 C9JAW5 83 aa16.91■□□□□ 0.3
SNX5-201ENST00000377759 PF4P02776 101 aa16.91■□□□□ 0.3
SNX5-201ENST00000377759 ZNF625Q96I27 306 aaPredicted RBP16.91■□□□□ 0.3
SNX5-201ENST00000377759 H7C423 109 aa16.9■□□□□ 0.3
SNX5-201ENST00000377759 SLC25A20O43772 301 aa16.9■□□□□ 0.3
SNX5-201ENST00000377759 PPDPFLQ8WWR9 84 aa16.9■□□□□ 0.3
SNX5-201ENST00000377759 SIGMAR1Q99720 223 aa16.9■□□□□ 0.3
SNX5-201ENST00000377759 ANKRD29Q8N6D5 301 aa16.9■□□□□ 0.3
SNX5-201ENST00000377759 ICOSQ9Y6W8 199 aa16.9■□□□□ 0.3
SNX5-201ENST00000377759 FN1P02751 2386 aaKnown RBP16.89■□□□□ 0.29
SNX5-201ENST00000377759 CIRBPQ14011 172 aaKnown RBP16.89■□□□□ 0.29
SNX5-201ENST00000377759 LINC00308Q8TCZ7 52 aa16.89■□□□□ 0.29
SNX5-201ENST00000377759 ATXN8Q156A1 80 aa16.88■□□□□ 0.29
SNX5-201ENST00000377759 M0QXV9 152 aa16.87■□□□□ 0.29
SNX5-201ENST00000377759 GAGE6Q13070 117 aa16.87■□□□□ 0.29
SNX5-201ENST00000377759 SPATA3Q8NHX4 192 aa16.87■□□□□ 0.29
SNX5-201ENST00000377759 TRBV6-8A0A0A6YYG3 113 aa16.87■□□□□ 0.29
SNX5-201ENST00000377759 CRLF1O75462 422 aa16.87■□□□□ 0.29
SNX5-201ENST00000377759 LINC01620Q4KN68 170 aa16.87■□□□□ 0.29
SNX5-201ENST00000377759 HECTD1Q9ULT8 2610 aa16.87■□□□□ 0.29
SNX5-201ENST00000377759 A0A0U1RRA0 63 aa16.86■□□□□ 0.29
SNX5-201ENST00000377759 LINC00612Q8N6U2 182 aa16.86■□□□□ 0.29
SNX5-201ENST00000377759 IGLV4-60A0A075B6I1 120 aa16.85■□□□□ 0.29
SNX5-201ENST00000377759 SOSTDC1Q6X4U4 206 aa16.85■□□□□ 0.29
SNX5-201ENST00000377759 DEFB130BP0DP73 79 aa16.85■□□□□ 0.29
SNX5-201ENST00000377759 DEFB130AP0DP74 79 aa16.85■□□□□ 0.29
SNX5-201ENST00000377759 KIR2DL5BQ8NHK3 375 aa16.85■□□□□ 0.29
SNX5-201ENST00000377759 CDIP1Q9H305 208 aa16.85■□□□□ 0.29
SNX5-201ENST00000377759 NOTCH2Q04721 2471 aa16.85■□□□□ 0.29
SNX5-201ENST00000377759 PRIMA1Q86XR5 153 aa16.84■□□□□ 0.29
SNX5-201ENST00000377759 RPL13AP40429 203 aaKnown RBP16.84■□□□□ 0.29
SNX5-201ENST00000377759 LINC01600Q96MT4 127 aa16.83■□□□□ 0.28
SNX5-201ENST00000377759 X6R8D5 127 aa16.83■□□□□ 0.28
SNX5-201ENST00000377759 GCN1Q92616 2671 aaKnown RBP16.83■□□□□ 0.28
SNX5-201ENST00000377759 VWFP04275 2813 aa16.81■□□□□ 0.28
SNX5-201ENST00000377759 CHCHD5Q9BSY4 110 aa16.8■□□□□ 0.28
SNX5-201ENST00000377759 HERV-K104P63124 156 aa16.8■□□□□ 0.28
SNX5-201ENST00000377759 MEIG1Q5JSS6 88 aa16.8■□□□□ 0.28
SNX5-201ENST00000377759 IGKV3OR2-268A0A0C4DH90 116 aa16.79■□□□□ 0.28
SNX5-201ENST00000377759 TRBV10-2A0A0K0K1G8 114 aa16.79■□□□□ 0.28
SNX5-201ENST00000377759 CLEC2BQ92478 149 aa16.79■□□□□ 0.28
SNX5-201ENST00000377759 COX6CP09669 75 aa16.78■□□□□ 0.28
SNX5-201ENST00000377759 OTOGQ6ZRI0 2925 aa16.78■□□□□ 0.28
SNX5-201ENST00000377759 IGHV3OR16-9A0A0B4J2B5 98 aa16.77■□□□□ 0.27
SNX5-201ENST00000377759 INAFM1C9JVW0 142 aa16.77■□□□□ 0.27
SNX5-201ENST00000377759 LST1O00453 97 aa16.75■□□□□ 0.27
SNX5-201ENST00000377759 SCGB1A1P11684 91 aa16.75■□□□□ 0.27
SNX5-201ENST00000377759 GYPEP15421 78 aa16.75■□□□□ 0.27
SNX5-201ENST00000377759 COX7B2Q8TF08 81 aa16.75■□□□□ 0.27
SNX5-201ENST00000377759 NTN5Q8WTR8 489 aaPredicted RBP16.75■□□□□ 0.27
SNX5-201ENST00000377759 NBEAL2Q6ZNJ1 2754 aa16.75■□□□□ 0.27
SNX5-201ENST00000377759 SMIM9A6NGZ8 99 aa16.73■□□□□ 0.27
SNX5-201ENST00000377759 COPS9Q8WXC6 57 aa16.73■□□□□ 0.27
SNX5-201ENST00000377759 NSD1Q96L73 2696 aaPredicted RBP16.73■□□□□ 0.27
SNX5-201ENST00000377759 C9orf66Q5T8R8 295 aa16.72■□□□□ 0.27
SNX5-201ENST00000377759 PPDPFQ9H3Y8 114 aa16.72■□□□□ 0.27
SNX5-201ENST00000377759 SHISA2Q6UWI4 295 aa16.71■□□□□ 0.27
SNX5-201ENST00000377759 A0A087WZ39 114 aa16.7■□□□□ 0.26
SNX5-201ENST00000377759 TOMM7Q9P0U1 55 aa16.7■□□□□ 0.26
SNX5-201ENST00000377759 FAM222AQ5U5X8 452 aa16.7■□□□□ 0.26
SNX5-201ENST00000377759 TEX49A0A1B0GTD5 131 aa16.69■□□□□ 0.26
SNX5-201ENST00000377759 LINC00959A0A1B0GUT2 108 aa16.69■□□□□ 0.26
SNX5-201ENST00000377759 XGP55808 180 aa16.69■□□□□ 0.26
SNX5-201ENST00000377759 C2orf82Q6UX34 121 aa16.69■□□□□ 0.26
SNX5-201ENST00000377759 PRO0255Q9UI72 69 aa16.69■□□□□ 0.26
SNX5-201ENST00000377759 TENM1Q9UKZ4 2725 aa16.69■□□□□ 0.26
SNX5-201ENST00000377759 C5orf38Q86SI9 138 aa16.68■□□□□ 0.26
SNX5-201ENST00000377759 MT-ATP8P03928 68 aa16.67■□□□□ 0.26
SNX5-201ENST00000377759 H3BT86 120 aa16.67■□□□□ 0.26
SNX5-201ENST00000377759 MIR7-3HGQ8N6C7 128 aa16.66■□□□□ 0.26
SNX5-201ENST00000377759 DEFB135Q30KP9 77 aa16.66■□□□□ 0.26
SNX5-201ENST00000377759 A0A1B0GUV1 79 aa16.65■□□□□ 0.26
SNX5-201ENST00000377759 A0A096LPF7 62 aa16.65■□□□□ 0.26
SNX5-201ENST00000377759 LYRM9A8MSI8 78 aa16.65■□□□□ 0.26
SNX5-201ENST00000377759 COX7A2LO14548 114 aa16.65■□□□□ 0.26
SNX5-201ENST00000377759 DEFB4AO15263 64 aa16.65■□□□□ 0.26
SNX5-201ENST00000377759 TMEM262E9PQX1 116 aa16.63■□□□□ 0.25
SNX5-201ENST00000377759 UBE2WQ96B02 151 aa16.63■□□□□ 0.25
SNX5-201ENST00000377759 PAX4O43316 350 aa16.62■□□□□ 0.25
SNX5-201ENST00000377759 IGKV2-28A0A075B6P5 120 aa16.61■□□□□ 0.25
SNX5-201ENST00000377759 IGKV2D-28P01615 120 aa16.61■□□□□ 0.25
SNX5-201ENST00000377759 CITED1Q99966 193 aa16.61■□□□□ 0.25
SNX5-201ENST00000377759 IGHV4-28A0A0C4DH34 117 aa16.6■□□□□ 0.25
SNX5-201ENST00000377759 XCL1P47992 114 aa16.59■□□□□ 0.25
SNX5-201ENST00000377759 LINC00158P58513 81 aa16.59■□□□□ 0.25
SNX5-201ENST00000377759 HIVEP1P15822 2718 aa16.59■□□□□ 0.25
SNX5-201ENST00000377759 LINC00337Q8N6G1 96 aa16.59■□□□□ 0.25
SNX5-201ENST00000377759 IBA57-AS1B1ANH7 110 aa16.58■□□□□ 0.25
SNX5-201ENST00000377759 SND1-IT1Q9HBX3 110 aa16.58■□□□□ 0.25
SNX5-201ENST00000377759 APOC4P55056 127 aa16.58■□□□□ 0.24
SNX5-201ENST00000377759 CCL18P55774 89 aa16.57■□□□□ 0.24
SNX5-201ENST00000377759 CLPSL2Q6UWE3 100 aa16.57■□□□□ 0.24
SNX5-201ENST00000377759 ATRQ13535 2644 aa16.57■□□□□ 0.24
SNX5-201ENST00000377759 SS18Q15532 418 aa16.57■□□□□ 0.24
SNX5-201ENST00000377759 TRAV13-2A0A0B4J235 113 aa16.56■□□□□ 0.24
SNX5-201ENST00000377759 CELA1Q9UNI1 258 aa16.56■□□□□ 0.24
SNX5-201ENST00000377759 TRRAPQ9Y4A5 3859 aa16.55■□□□□ 0.24
SNX5-201ENST00000377759 Q8NAQ8 132 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 335.4 ms