RNA–Protein interactions for RNA: ENST00000377390.7

SF1-204, Transcript of splicing factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SF1, Length 3,470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-204ENST00000377390 WFDC9Q8NEX5 89 aa8.89□□□□□ -0.99
SF1-204ENST00000377390 ATP5G1P05496 136 aa8.89□□□□□ -0.99
SF1-204ENST00000377390 ACYP1P07311 99 aa8.89□□□□□ -0.99
SF1-204ENST00000377390 LINC00158P58513 81 aa8.89□□□□□ -0.99
SF1-204ENST00000377390 ATOX1O00244 68 aa8.89□□□□□ -0.99
SF1-204ENST00000377390 A0A0J9YX75 114 aa8.88□□□□□ -0.99
SF1-204ENST00000377390 B4DSR2 109 aa8.88□□□□□ -0.99
SF1-204ENST00000377390 LRRC75A-AS1Q8N1F1 130 aa8.88□□□□□ -0.99
SF1-204ENST00000377390 CYSTM1Q9H1C7 97 aa8.88□□□□□ -0.99
SF1-204ENST00000377390 TRAV25A0A0B4J276 109 aa8.88□□□□□ -0.99
SF1-204ENST00000377390 LINC00308Q8TCZ7 52 aa8.88□□□□□ -0.99
SF1-204ENST00000377390 FAM240AA0A1B0GVK7 77 aa8.87□□□□□ -0.99
SF1-204ENST00000377390 PFN2P35080 140 aa8.87□□□□□ -0.99
SF1-204ENST00000377390 FBXL19-AS1Q494R0 122 aa8.87□□□□□ -0.99
SF1-204ENST00000377390 Q8N2B8 174 aa8.87□□□□□ -0.99
SF1-204ENST00000377390 ZNF843Q8N446 348 aa8.87□□□□□ -0.99
SF1-204ENST00000377390 TRAV23DV6A0A075B6W5 121 aa8.86□□□□□ -0.99
SF1-204ENST00000377390 CRPP02741 224 aa8.86□□□□□ -0.99
SF1-204ENST00000377390 MRPS36P82909 103 aaKnown RBP8.86□□□□□ -0.99
SF1-204ENST00000377390 CFHR3Q02985 330 aa8.86□□□□□ -0.99
SF1-204ENST00000377390 DCANP1Q8TF63 244 aa8.86□□□□□ -0.99
SF1-204ENST00000377390 XCL2Q9UBD3 114 aa8.86□□□□□ -0.99
SF1-204ENST00000377390 TRGV1A0A0A0MS02 117 aa8.86□□□□□ -0.99
SF1-204ENST00000377390 C9orf85Q96MD7 179 aa8.86□□□□□ -0.99
SF1-204ENST00000377390 SLURP1P55000 103 aa8.86□□□□□ -0.99
SF1-204ENST00000377390 COX7A2LO14548 114 aa8.85□□□□□ -0.99
SF1-204ENST00000377390 UBE2L6O14933 153 aa8.85□□□□□ -0.99
SF1-204ENST00000377390 INAFM2P0DMQ5 153 aa8.85□□□□□ -0.99
SF1-204ENST00000377390 LITAFQ99732 161 aa8.85□□□□□ -0.99
SF1-204ENST00000377390 IMUPQ9GZP8 106 aa8.85□□□□□ -0.99
SF1-204ENST00000377390 PAX4O43316 350 aa8.85□□□□□ -0.99
SF1-204ENST00000377390 SLPIP03973 132 aa8.85□□□□□ -0.99
SF1-204ENST00000377390 COX6A2Q02221 97 aa8.85□□□□□ -0.99
SF1-204ENST00000377390 Q6ZSN1 163 aa8.85□□□□□ -0.99
SF1-204ENST00000377390 C20orf197Q8N268 126 aa8.85□□□□□ -0.99
SF1-204ENST00000377390 SPANXDQ9BXN6 97 aa8.85□□□□□ -0.99
SF1-204ENST00000377390 SPANXCQ9NY87 97 aa8.85□□□□□ -0.99
SF1-204ENST00000377390 PDZD2O15018 2839 aa8.84□□□□□ -0.99
SF1-204ENST00000377390 APRG1Q8IVJ8 170 aa8.84□□□□□ -0.99
SF1-204ENST00000377390 DYNLRB2Q8TF09 96 aa8.84□□□□□ -0.99
SF1-204ENST00000377390 FBN1P35555 2871 aaKnown RBP8.84□□□□□ -0.99
SF1-204ENST00000377390 A0A0U1RQV1 116 aa8.83□□□□□ -1
SF1-204ENST00000377390 IGHG2P01859 326 aa8.83□□□□□ -1
SF1-204ENST00000377390 CITED2Q99967 270 aaPredicted RBP8.83□□□□□ -1
SF1-204ENST00000377390 DPH3Q96FX2 82 aa8.83□□□□□ -1
SF1-204ENST00000377390 NCR3O14931 201 aa8.82□□□□□ -1
SF1-204ENST00000377390 ZNF415Q09FC8 603 aa8.82□□□□□ -1
SF1-204ENST00000377390 FAM19A4Q96LR4 140 aa8.82□□□□□ -1
SF1-204ENST00000377390 UBE2D4Q9Y2X8 147 aa8.82□□□□□ -1
SF1-204ENST00000377390 COPS9Q8WXC6 57 aa8.82□□□□□ -1
SF1-204ENST00000377390 USP17L23D6RBM5 183 aa8.82□□□□□ -1
SF1-204ENST00000377390 RPL18AQ02543 176 aaKnown RBP8.82□□□□□ -1
SF1-204ENST00000377390 TMEM243Q9BU79 118 aa8.82□□□□□ -1
SF1-204ENST00000377390 OTOGQ6ZRI0 2925 aa8.81□□□□□ -1
SF1-204ENST00000377390 MALP21145 153 aa8.81□□□□□ -1
SF1-204ENST00000377390 BAHCC1Q9P281 2608 aa8.81□□□□□ -1
SF1-204ENST00000377390 HILS1P60008 231 aa8.81□□□□□ -1
SF1-204ENST00000377390 MIR7-3HGQ8N6C7 128 aa8.81□□□□□ -1
SF1-204ENST00000377390 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.8□□□□□ -1
SF1-204ENST00000377390 FAM218AQ96MZ4 157 aa8.8□□□□□ -1
SF1-204ENST00000377390 PYGO1Q9Y3Y4 419 aa8.8□□□□□ -1
SF1-204ENST00000377390 LECT2O14960 151 aa8.8□□□□□ -1
SF1-204ENST00000377390 RPL36AP83881 106 aaKnown RBP8.8□□□□□ -1
SF1-204ENST00000377390 RPL36ALQ969Q0 106 aaKnown RBP8.8□□□□□ -1
SF1-204ENST00000377390 SND1-IT1Q9HBX3 110 aa8.8□□□□□ -1
SF1-204ENST00000377390 K7EQG2 157 aa8.79□□□□□ -1
SF1-204ENST00000377390 GHRHP01286 108 aa8.79□□□□□ -1
SF1-204ENST00000377390 RPL35AP18077 110 aaKnown RBP8.79□□□□□ -1
SF1-204ENST00000377390 SERP2Q8N6R1 65 aa8.79□□□□□ -1
SF1-204ENST00000377390 LINC01356Q8N9X3 169 aa8.79□□□□□ -1
SF1-204ENST00000377390 VWFP04275 2813 aa8.79□□□□□ -1
SF1-204ENST00000377390 NDUFA1O15239 70 aa8.79□□□□□ -1
SF1-204ENST00000377390 SOSTDC1Q6X4U4 206 aa8.79□□□□□ -1
SF1-204ENST00000377390 CHCHD7Q9BUK0 85 aa8.79□□□□□ -1
SF1-204ENST00000377390 RBMY1A1P0DJD3 496 aaKnown RBP8.78□□□□□ -1
SF1-204ENST00000377390 RBMY1CP0DJD4 496 aa8.78□□□□□ -1
SF1-204ENST00000377390 RBMY1FQ15415 496 aaKnown RBP8.78□□□□□ -1
SF1-204ENST00000377390 LINC00846Q9NV44 126 aa8.78□□□□□ -1
SF1-204ENST00000377390 C5orf38Q86SI9 138 aa8.78□□□□□ -1
SF1-204ENST00000377390 NSD1Q96L73 2696 aaPredicted RBP8.78□□□□□ -1
SF1-204ENST00000377390 TMEM258P61165 79 aa8.78□□□□□ -1
SF1-204ENST00000377390 ZNF469Q96JG9 3925 aaPredicted RBP8.77□□□□□ -1
SF1-204ENST00000377390 TRGV2A0A075B6R0 118 aa8.77□□□□□ -1.01
SF1-204ENST00000377390 CRYGAP11844 174 aa8.77□□□□□ -1.01
SF1-204ENST00000377390 RBMY1BA6NDE4 496 aaKnown RBP8.77□□□□□ -1.01
SF1-204ENST00000377390 RBMY1EA6NEQ0 496 aaKnown RBP8.77□□□□□ -1.01
SF1-204ENST00000377390 RBMY1DP0C7P1 496 aaKnown RBP8.77□□□□□ -1.01
SF1-204ENST00000377390 LINC00242Q5T6M2 205 aa8.77□□□□□ -1.01
SF1-204ENST00000377390 K7EMT4 169 aa8.77□□□□□ -1.01
SF1-204ENST00000377390 WFDC10AQ9H1F0 79 aa8.76□□□□□ -1.01
SF1-204ENST00000377390 C9orf129Q5T035 196 aaKnown RBP8.75□□□□□ -1.01
SF1-204ENST00000377390 TENM1Q9UKZ4 2725 aa8.75□□□□□ -1.01
SF1-204ENST00000377390 TRAV13-2A0A0B4J235 113 aa8.75□□□□□ -1.01
SF1-204ENST00000377390 A6NDX4 124 aa8.75□□□□□ -1.01
SF1-204ENST00000377390 ENHOQ6UWT2 76 aa8.75□□□□□ -1.01
SF1-204ENST00000377390 BRK1Q8WUW1 75 aa8.75□□□□□ -1.01
SF1-204ENST00000377390 SNURFQ9Y675 71 aa8.75□□□□□ -1.01
SF1-204ENST00000377390 H3BUA1 57 aa8.74□□□□□ -1.01
SF1-204ENST00000377390 HAMPP81172 84 aa8.74□□□□□ -1.01
SF1-204ENST00000377390 ESM1Q9NQ30 184 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms