RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 SCGB1C2P0DMR2 95 aa8.77□□□□□ -1.01
VRK3-202ENST00000377011 A0A0J9YXV3 536 aa8.76□□□□□ -1.01
VRK3-202ENST00000377011 TINCRA0A1B0GVN0 87 aa8.76□□□□□ -1.01
VRK3-202ENST00000377011 TCL1BO95988 128 aa8.76□□□□□ -1.01
VRK3-202ENST00000377011 INSP01308 110 aa8.76□□□□□ -1.01
VRK3-202ENST00000377011 IGHV3-53P01767 116 aa8.76□□□□□ -1.01
VRK3-202ENST00000377011 NANOS2P60321 138 aaKnown RBP8.76□□□□□ -1.01
VRK3-202ENST00000377011 LINC01600Q96MT4 127 aa8.76□□□□□ -1.01
VRK3-202ENST00000377011 OPRPNQ99935 248 aaPredicted RBP8.76□□□□□ -1.01
VRK3-202ENST00000377011 TIMM21Q9BVV7 248 aa8.75□□□□□ -1.01
VRK3-202ENST00000377011 ERG28Q9UKR5 140 aa8.75□□□□□ -1.01
VRK3-202ENST00000377011 CELA1Q9UNI1 258 aa8.75□□□□□ -1.01
VRK3-202ENST00000377011 RS1O15537 224 aa8.74□□□□□ -1.01
VRK3-202ENST00000377011 IGHV3-33P01772 117 aa8.74□□□□□ -1.01
VRK3-202ENST00000377011 C1orf158Q8N1D5 194 aa8.74□□□□□ -1.01
VRK3-202ENST00000377011 C11orf72Q8NBR9 251 aa8.74□□□□□ -1.01
VRK3-202ENST00000377011 TMEM263Q8WUH6 116 aaKnown RBP8.74□□□□□ -1.01
VRK3-202ENST00000377011 FAM104AQ969W3 186 aa8.74□□□□□ -1.01
VRK3-202ENST00000377011 CDIP1Q9H305 208 aa8.74□□□□□ -1.01
VRK3-202ENST00000377011 IGHV1-58A0A0C4DH39 117 aa8.74□□□□□ -1.01
VRK3-202ENST00000377011 A0A0J9YXY3 114 aa8.74□□□□□ -1.01
VRK3-202ENST00000377011 A4D1N5 150 aa8.74□□□□□ -1.01
VRK3-202ENST00000377011 DEFB104AQ8WTQ1 72 aa8.74□□□□□ -1.01
VRK3-202ENST00000377011 CHCHD7Q9BUK0 85 aa8.74□□□□□ -1.01
VRK3-202ENST00000377011 SPANXDQ9BXN6 97 aa8.74□□□□□ -1.01
VRK3-202ENST00000377011 SPANXCQ9NY87 97 aa8.74□□□□□ -1.01
VRK3-202ENST00000377011 UBE2D4Q9Y2X8 147 aa8.74□□□□□ -1.01
VRK3-202ENST00000377011 DNAH10Q8IVF4 4471 aa8.73□□□□□ -1.01
VRK3-202ENST00000377011 IGHV3-30-3P0DP02 117 aa8.73□□□□□ -1.01
VRK3-202ENST00000377011 CARD19Q96LW7 228 aa8.73□□□□□ -1.01
VRK3-202ENST00000377011 IGHV3OR16-12A0A075B7B8 117 aa8.72□□□□□ -1.01
VRK3-202ENST00000377011 TIMM17BO60830 172 aa8.72□□□□□ -1.01
VRK3-202ENST00000377011 LINC01587Q99440 93 aa8.72□□□□□ -1.01
VRK3-202ENST00000377011 ATXN8Q156A1 80 aa8.71□□□□□ -1.01
VRK3-202ENST00000377011 MUSTN1Q8IVN3 82 aa8.71□□□□□ -1.01
VRK3-202ENST00000377011 C11orf68Q9H3H3 251 aaKnown RBP8.71□□□□□ -1.01
VRK3-202ENST00000377011 DNAH2Q9P225 4427 aa8.71□□□□□ -1.01
VRK3-202ENST00000377011 FRAS1Q86XX4 4008 aa8.71□□□□□ -1.01
VRK3-202ENST00000377011 IGLV5-45A0A087WSX0 123 aa8.71□□□□□ -1.02
VRK3-202ENST00000377011 TRBV30A0A0K0K1B3 111 aa8.71□□□□□ -1.02
VRK3-202ENST00000377011 LCE6AA0A183 80 aa8.71□□□□□ -1.02
VRK3-202ENST00000377011 SLC25A20O43772 301 aa8.71□□□□□ -1.02
VRK3-202ENST00000377011 TIRAPP58753 221 aa8.71□□□□□ -1.02
VRK3-202ENST00000377011 CKS1BP61024 79 aa8.71□□□□□ -1.02
VRK3-202ENST00000377011 VSIG2Q96IQ7 327 aa8.71□□□□□ -1.02
VRK3-202ENST00000377011 LITAFQ99732 161 aa8.71□□□□□ -1.02
VRK3-202ENST00000377011 IGHV3-73A0A0B4J1V6 119 aa8.7□□□□□ -1.02
VRK3-202ENST00000377011 SPINK8P0C7L1 97 aa8.7□□□□□ -1.02
VRK3-202ENST00000377011 HTN1P15515 57 aa8.7□□□□□ -1.02
VRK3-202ENST00000377011 SFTA2Q6UW10 78 aa8.7□□□□□ -1.02
VRK3-202ENST00000377011 Q6ZUT4 128 aa8.7□□□□□ -1.02
VRK3-202ENST00000377011 C11orf45Q8TAV5 145 aa8.7□□□□□ -1.02
VRK3-202ENST00000377011 IFITM1P13164 125 aa8.69□□□□□ -1.02
VRK3-202ENST00000377011 CEMP1Q6PRD7 247 aaPredicted RBP8.69□□□□□ -1.02
VRK3-202ENST00000377011 FAM19A3Q7Z5A8 133 aa8.69□□□□□ -1.02
VRK3-202ENST00000377011 ANKRD29Q8N6D5 301 aa8.69□□□□□ -1.02
VRK3-202ENST00000377011 NDUFA12Q9UI09 145 aa8.69□□□□□ -1.02
VRK3-202ENST00000377011 TRBV10-1A0A0K0K1A3 114 aa8.68□□□□□ -1.02
VRK3-202ENST00000377011 MIFP14174 115 aa8.68□□□□□ -1.02
VRK3-202ENST00000377011 MIAQ16674 131 aa8.68□□□□□ -1.02
VRK3-202ENST00000377011 Q6ZSN1 163 aa8.68□□□□□ -1.02
VRK3-202ENST00000377011 Q6ZTC4 211 aa8.68□□□□□ -1.02
VRK3-202ENST00000377011 IGHV3-64A0A075B6Q5 118 aa8.68□□□□□ -1.02
VRK3-202ENST00000377011 EIF4EBP3O60516 100 aaPredicted RBP8.68□□□□□ -1.02
VRK3-202ENST00000377011 GEMIN7Q9H840 131 aaKnown RBP8.68□□□□□ -1.02
VRK3-202ENST00000377011 CSDC2Q9Y534 153 aaKnown RBP8.68□□□□□ -1.02
VRK3-202ENST00000377011 DNAH6Q9C0G6 4158 aa8.67□□□□□ -1.02
VRK3-202ENST00000377011 C9JAW5 83 aa8.67□□□□□ -1.02
VRK3-202ENST00000377011 TRBV10-2A0A0K0K1G8 114 aa8.66□□□□□ -1.02
VRK3-202ENST00000377011 COX6CP09669 75 aa8.66□□□□□ -1.02
VRK3-202ENST00000377011 RPL13AP40429 203 aaKnown RBP8.66□□□□□ -1.02
VRK3-202ENST00000377011 Q1RN00 199 aa8.66□□□□□ -1.02
VRK3-202ENST00000377011 LINC01620Q4KN68 170 aa8.66□□□□□ -1.02
VRK3-202ENST00000377011 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.66□□□□□ -1.02
VRK3-202ENST00000377011 PLAC8L1A1L4L8 177 aa8.66□□□□□ -1.02
VRK3-202ENST00000377011 IGKV2-29A2NJV5 120 aaPredicted RBP8.66□□□□□ -1.02
VRK3-202ENST00000377011 NDUFA1O15239 70 aa8.66□□□□□ -1.02
VRK3-202ENST00000377011 MT-ATP8P03928 68 aa8.66□□□□□ -1.02
VRK3-202ENST00000377011 XGP55808 180 aa8.66□□□□□ -1.02
VRK3-202ENST00000377011 HERVK_113P63121 156 aa8.66□□□□□ -1.02
VRK3-202ENST00000377011 TRAV8-3A0A0A6YYJ7 113 aa8.65□□□□□ -1.03
VRK3-202ENST00000377011 DAZ2Q13117 558 aaKnown RBP8.65□□□□□ -1.03
VRK3-202ENST00000377011 DAZ4Q86SG3 579 aaKnown RBP8.65□□□□□ -1.03
VRK3-202ENST00000377011 COPS9Q8WXC6 57 aa8.65□□□□□ -1.03
VRK3-202ENST00000377011 PPDPFQ9H3Y8 114 aa8.65□□□□□ -1.03
VRK3-202ENST00000377011 DAZ3Q9NR90 486 aaKnown RBP8.65□□□□□ -1.03
VRK3-202ENST00000377011 TRAV4A0A0B4J268 109 aa8.64□□□□□ -1.03
VRK3-202ENST00000377011 IGLV5-39A0A0G2JS06 123 aa8.64□□□□□ -1.03
VRK3-202ENST00000377011 RPL36AP83881 106 aaKnown RBP8.64□□□□□ -1.03
VRK3-202ENST00000377011 FAM222AQ5U5X8 452 aa8.64□□□□□ -1.03
VRK3-202ENST00000377011 DGAT2L7PQ6IED9 249 aa8.64□□□□□ -1.03
VRK3-202ENST00000377011 RPL36ALQ969Q0 106 aaKnown RBP8.64□□□□□ -1.03
VRK3-202ENST00000377011 NACAE9PAV3 2078 aa8.63□□□□□ -1.03
VRK3-202ENST00000377011 NUPR2A6NF83 97 aa8.63□□□□□ -1.03
VRK3-202ENST00000377011 H3BT86 120 aa8.63□□□□□ -1.03
VRK3-202ENST00000377011 K7EQD1 137 aa8.63□□□□□ -1.03
VRK3-202ENST00000377011 CIRBPQ14011 172 aaKnown RBP8.63□□□□□ -1.03
VRK3-202ENST00000377011 LINC00476Q8WZB0 136 aa8.63□□□□□ -1.03
VRK3-202ENST00000377011 PRSS2P07478 247 aa8.63□□□□□ -1.03
VRK3-202ENST00000377011 Q9UF83 564 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms