RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 MIAQ16674 131 aa13□□□□□ -0.33
PTPDC1-202ENST00000375360 C16orf95Q9H693 158 aa13□□□□□ -0.33
PTPDC1-202ENST00000375360 CXCL5P42830 114 aa13□□□□□ -0.33
PTPDC1-202ENST00000375360 TIRAPP58753 221 aa12.99□□□□□ -0.33
PTPDC1-202ENST00000375360 NANOS2P60321 138 aaKnown RBP12.99□□□□□ -0.33
PTPDC1-202ENST00000375360 ORMDL1Q9P0S3 153 aa12.99□□□□□ -0.33
PTPDC1-202ENST00000375360 TM2D2Q9BX73 214 aa12.99□□□□□ -0.33
PTPDC1-202ENST00000375360 UBE2D4Q9Y2X8 147 aa12.99□□□□□ -0.33
PTPDC1-202ENST00000375360 PYGO1Q9Y3Y4 419 aa12.99□□□□□ -0.33
PTPDC1-202ENST00000375360 COL27A1Q8IZC6 1860 aaPredicted RBP12.99□□□□□ -0.33
PTPDC1-202ENST00000375360 COX8CQ7Z4L0 72 aa12.99□□□□□ -0.33
PTPDC1-202ENST00000375360 C15orf53Q8NAA6 179 aa12.98□□□□□ -0.33
PTPDC1-202ENST00000375360 CHD6Q8TD26 2715 aa12.98□□□□□ -0.33
PTPDC1-202ENST00000375360 UBL5Q9BZL1 73 aa12.98□□□□□ -0.33
PTPDC1-202ENST00000375360 H0YGX0 51 aa12.98□□□□□ -0.33
PTPDC1-202ENST00000375360 A0A0J9YWU9 116 aa12.97□□□□□ -0.33
PTPDC1-202ENST00000375360 RPL32P62910 135 aaKnown RBP12.97□□□□□ -0.33
PTPDC1-202ENST00000375360 IGLV2-18A0A075B6J9 118 aa12.97□□□□□ -0.33
PTPDC1-202ENST00000375360 UBE2D3P61077 147 aa12.96□□□□□ -0.33
PTPDC1-202ENST00000375360 UBE2D2P62837 147 aa12.96□□□□□ -0.33
PTPDC1-202ENST00000375360 CRYBA4P53673 196 aa12.96□□□□□ -0.33
PTPDC1-202ENST00000375360 IGSF10Q6WRI0 2623 aa12.95□□□□□ -0.34
PTPDC1-202ENST00000375360 IGIPA6NJ69 53 aa12.95□□□□□ -0.34
PTPDC1-202ENST00000375360 Q6ZSN1 163 aa12.95□□□□□ -0.34
PTPDC1-202ENST00000375360 CDK2AP2O75956 126 aa12.94□□□□□ -0.34
PTPDC1-202ENST00000375360 RNASE8Q8TDE3 154 aaKnown RBP12.94□□□□□ -0.34
PTPDC1-202ENST00000375360 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.94□□□□□ -0.34
PTPDC1-202ENST00000375360 TEX15Q9BXT5 2789 aa12.93□□□□□ -0.34
PTPDC1-202ENST00000375360 SPANXCQ9NY87 97 aa12.93□□□□□ -0.34
PTPDC1-202ENST00000375360 H7C423 109 aa12.93□□□□□ -0.34
PTPDC1-202ENST00000375360 A0A096LNJ9 63 aa12.93□□□□□ -0.34
PTPDC1-202ENST00000375360 C2orf91Q6ZV80 131 aa12.92□□□□□ -0.34
PTPDC1-202ENST00000375360 NBEAQ8NFP9 2946 aa12.92□□□□□ -0.34
PTPDC1-202ENST00000375360 LINC00694P0DN24 101 aa12.92□□□□□ -0.34
PTPDC1-202ENST00000375360 LINC00308Q8TCZ7 52 aa12.92□□□□□ -0.34
PTPDC1-202ENST00000375360 TRAV10A0A0B4J240 114 aa12.92□□□□□ -0.34
PTPDC1-202ENST00000375360 LINC00959A0A1B0GUT2 108 aa12.92□□□□□ -0.34
PTPDC1-202ENST00000375360 ATMQ13315 3056 aa12.92□□□□□ -0.34
PTPDC1-202ENST00000375360 Q8N2B8 174 aa12.91□□□□□ -0.34
PTPDC1-202ENST00000375360 TEN1Q86WV5 123 aa12.91□□□□□ -0.34
PTPDC1-202ENST00000375360 CDC42SE2Q9NRR3 84 aa12.91□□□□□ -0.34
PTPDC1-202ENST00000375360 DMXL2Q8TDJ6 3036 aa12.91□□□□□ -0.34
PTPDC1-202ENST00000375360 TCL1BO95988 128 aa12.91□□□□□ -0.34
PTPDC1-202ENST00000375360 RBMY1FQ15415 496 aaKnown RBP12.91□□□□□ -0.34
PTPDC1-202ENST00000375360 UFSP1Q6NVU6 142 aa12.9□□□□□ -0.34
PTPDC1-202ENST00000375360 FLNCQ14315 2725 aa12.9□□□□□ -0.34
PTPDC1-202ENST00000375360 STAB1Q9NY15 2570 aa12.9□□□□□ -0.35
PTPDC1-202ENST00000375360 REV3LO60673 3130 aa12.89□□□□□ -0.35
PTPDC1-202ENST00000375360 UBE2D1P51668 147 aa12.89□□□□□ -0.35
PTPDC1-202ENST00000375360 LELP1Q5T871 98 aa12.89□□□□□ -0.35
PTPDC1-202ENST00000375360 Q6ZTC4 211 aa12.89□□□□□ -0.35
PTPDC1-202ENST00000375360 LINC00242Q5T6M2 205 aa12.88□□□□□ -0.35
PTPDC1-202ENST00000375360 DIRC1Q969H9 104 aa12.88□□□□□ -0.35
PTPDC1-202ENST00000375360 M0R2N4 97 aa12.88□□□□□ -0.35
PTPDC1-202ENST00000375360 IGLV4-60A0A075B6I1 120 aa12.88□□□□□ -0.35
PTPDC1-202ENST00000375360 CD164L2Q6UWJ8 174 aa12.87□□□□□ -0.35
PTPDC1-202ENST00000375360 POM121L12Q8N7R1 296 aa12.87□□□□□ -0.35
PTPDC1-202ENST00000375360 FHL2Q14192 279 aa12.87□□□□□ -0.35
PTPDC1-202ENST00000375360 IBA57-AS1B1ANH7 110 aa12.86□□□□□ -0.35
PTPDC1-202ENST00000375360 RNF183Q96D59 192 aa12.86□□□□□ -0.35
PTPDC1-202ENST00000375360 hADV29S1A0JD25 119 aa12.85□□□□□ -0.35
PTPDC1-202ENST00000375360 MRPS36P82909 103 aaKnown RBP12.85□□□□□ -0.35
PTPDC1-202ENST00000375360 ADGRG4Q8IZF6 3080 aa12.85□□□□□ -0.35
PTPDC1-202ENST00000375360 TRBV10-2A0A0K0K1G8 114 aa12.85□□□□□ -0.35
PTPDC1-202ENST00000375360 CHCHD7Q9BUK0 85 aa12.85□□□□□ -0.35
PTPDC1-202ENST00000375360 A0A0B4J2C4 111 aa12.84□□□□□ -0.35
PTPDC1-202ENST00000375360 SYCNQ0VAF6 134 aa12.83□□□□□ -0.35
PTPDC1-202ENST00000375360 COL12A1Q99715 3063 aa12.83□□□□□ -0.35
PTPDC1-202ENST00000375360 UBE2AP49459 152 aa12.83□□□□□ -0.36
PTPDC1-202ENST00000375360 IL17DQ8TAD2 202 aa12.83□□□□□ -0.36
PTPDC1-202ENST00000375360 HIGD2AQ9BW72 106 aa12.83□□□□□ -0.36
PTPDC1-202ENST00000375360 SLPIP03973 132 aa12.83□□□□□ -0.36
PTPDC1-202ENST00000375360 BEAN1Q3B7T3 259 aa12.83□□□□□ -0.36
PTPDC1-202ENST00000375360 COL6A5A8TX70 2615 aa12.82□□□□□ -0.36
PTPDC1-202ENST00000375360 SPANXB1Q9NS25 103 aaPredicted RBP12.82□□□□□ -0.36
PTPDC1-202ENST00000375360 KIF25-AS1Q9Y6Z4 181 aa12.82□□□□□ -0.36
PTPDC1-202ENST00000375360 Q9UF83 564 aa12.82□□□□□ -0.36
PTPDC1-202ENST00000375360 TRIAP1O43715 76 aa12.81□□□□□ -0.36
PTPDC1-202ENST00000375360 FOXI1Q12951 378 aa12.81□□□□□ -0.36
PTPDC1-202ENST00000375360 COX6A2Q02221 97 aa12.81□□□□□ -0.36
PTPDC1-202ENST00000375360 IGKV3D-7A0A0C4DH55 119 aa12.81□□□□□ -0.36
PTPDC1-202ENST00000375360 FSHBP01225 129 aa12.81□□□□□ -0.36
PTPDC1-202ENST00000375360 G3V4G9 280 aa12.8□□□□□ -0.36
PTPDC1-202ENST00000375360 TACC2O95359 2948 aa12.8□□□□□ -0.36
PTPDC1-202ENST00000375360 ZZEF1O43149 2961 aa12.8□□□□□ -0.36
PTPDC1-202ENST00000375360 IGLV4-69A0A075B6H9 119 aa12.8□□□□□ -0.36
PTPDC1-202ENST00000375360 C6orf99Q4VX62 202 aa12.8□□□□□ -0.36
PTPDC1-202ENST00000375360 UNC79Q9P2D8 2635 aa12.79□□□□□ -0.36
PTPDC1-202ENST00000375360 A0A096LNI7 61 aa12.79□□□□□ -0.36
PTPDC1-202ENST00000375360 TRACP01848 142 aa12.79□□□□□ -0.36
PTPDC1-202ENST00000375360 COX7BP24311 80 aa12.79□□□□□ -0.36
PTPDC1-202ENST00000375360 H3BT86 120 aa12.78□□□□□ -0.36
PTPDC1-202ENST00000375360 TSPEAR-AS2P59090 65 aa12.78□□□□□ -0.36
PTPDC1-202ENST00000375360 FHL3Q13643 280 aa12.78□□□□□ -0.36
PTPDC1-202ENST00000375360 C11orf72Q8NBR9 251 aa12.78□□□□□ -0.36
PTPDC1-202ENST00000375360 FAM19A5Q7Z5A7 132 aaPredicted RBP12.78□□□□□ -0.36
PTPDC1-202ENST00000375360 FUSP35637 526 aaKnown RBP eCLIP12.78□□□□□ -0.36
PTPDC1-202ENST00000375360 C14orf132Q9NPU4 83 aa12.78□□□□□ -0.36
PTPDC1-202ENST00000375360 C9orf116Q5BN46 136 aaPredicted RBP12.77□□□□□ -0.37
PTPDC1-202ENST00000375360 UNQ6190/PRO20217Q6UXQ8 127 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms