RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 C1orf43Q9BWL3 253 aa4.75□□□□□ -1.65
SMC1A-202ENST00000375340 POLQO75417 2590 aa4.74□□□□□ -1.65
SMC1A-202ENST00000375340 DIRC1Q969H9 104 aa4.74□□□□□ -1.65
SMC1A-202ENST00000375340 BBC3Q96PG8 261 aaPredicted RBP4.74□□□□□ -1.65
SMC1A-202ENST00000375340 J3QKU1 62 aa4.74□□□□□ -1.65
SMC1A-202ENST00000375340 PLA2G2AP14555 144 aa4.74□□□□□ -1.65
SMC1A-202ENST00000375340 FAM110AQ9BQ89 295 aa4.74□□□□□ -1.65
SMC1A-202ENST00000375340 CDIP1Q9H305 208 aa4.74□□□□□ -1.65
SMC1A-202ENST00000375340 TIMM17BO60830 172 aa4.74□□□□□ -1.65
SMC1A-202ENST00000375340 COX7BP24311 80 aa4.73□□□□□ -1.65
SMC1A-202ENST00000375340 PRR3P79522 188 aaKnown RBP4.73□□□□□ -1.65
SMC1A-202ENST00000375340 ETDCA0A1B0GVM5 59 aa4.73□□□□□ -1.65
SMC1A-202ENST00000375340 CHD9Q3L8U1 2897 aa4.73□□□□□ -1.65
SMC1A-202ENST00000375340 JMJD7-PLA2G4BH0Y9G9 81 aa4.72□□□□□ -1.65
SMC1A-202ENST00000375340 C9orf116Q5BN46 136 aaPredicted RBP4.72□□□□□ -1.65
SMC1A-202ENST00000375340 LINC00242Q5T6M2 205 aa4.72□□□□□ -1.65
SMC1A-202ENST00000375340 SMCPP49901 116 aaPredicted RBP4.72□□□□□ -1.65
SMC1A-202ENST00000375340 PRO0255Q9UI72 69 aa4.72□□□□□ -1.65
SMC1A-202ENST00000375340 TRANK1O15050 2925 aa4.72□□□□□ -1.65
SMC1A-202ENST00000375340 DOPEY1Q5JWR5 2465 aa4.72□□□□□ -1.65
SMC1A-202ENST00000375340 IBA57-AS1B1ANH7 110 aa4.72□□□□□ -1.65
SMC1A-202ENST00000375340 A0A0C4DFX4 3053 aa4.72□□□□□ -1.65
SMC1A-202ENST00000375340 AMELXQ99217 191 aa4.72□□□□□ -1.65
SMC1A-202ENST00000375340 CDC42SE2Q9NRR3 84 aa4.72□□□□□ -1.65
SMC1A-202ENST00000375340 SNURFQ9Y675 71 aa4.72□□□□□ -1.65
SMC1A-202ENST00000375340 UQCRQO14949 82 aa4.71□□□□□ -1.65
SMC1A-202ENST00000375340 XAGE1AQ9HD64 81 aa4.71□□□□□ -1.65
SMC1A-202ENST00000375340 MUC4Q99102 2169 aa4.71□□□□□ -1.65
SMC1A-202ENST00000375340 LINC00959A0A1B0GUT2 108 aa4.71□□□□□ -1.65
SMC1A-202ENST00000375340 SMIM1B2RUZ4 78 aa4.71□□□□□ -1.65
SMC1A-202ENST00000375340 NREPQ16612 68 aa4.71□□□□□ -1.65
SMC1A-202ENST00000375340 SZT2Q5T011 3432 aa4.71□□□□□ -1.66
SMC1A-202ENST00000375340 KRTAP10-9P60411 292 aa4.71□□□□□ -1.66
SMC1A-202ENST00000375340 NDUFS5O43920 106 aa4.71□□□□□ -1.66
SMC1A-202ENST00000375340 IGLV4-60A0A075B6I1 120 aa4.7□□□□□ -1.66
SMC1A-202ENST00000375340 TRBV6-4A0A1B0GX49 114 aa4.7□□□□□ -1.66
SMC1A-202ENST00000375340 FAM19A4Q96LR4 140 aa4.7□□□□□ -1.66
SMC1A-202ENST00000375340 KIF25-AS1Q9Y6Z4 181 aa4.7□□□□□ -1.66
SMC1A-202ENST00000375340 CCL18P55774 89 aa4.7□□□□□ -1.66
SMC1A-202ENST00000375340 C6orf99Q4VX62 202 aa4.7□□□□□ -1.66
SMC1A-202ENST00000375340 ZNF843Q8N446 348 aa4.7□□□□□ -1.66
SMC1A-202ENST00000375340 A0A087WVE0 104 aa4.7□□□□□ -1.66
SMC1A-202ENST00000375340 FUSP35637 526 aaKnown RBP eCLIP4.7□□□□□ -1.66
SMC1A-202ENST00000375340 C20orf197Q8N268 126 aa4.7□□□□□ -1.66
SMC1A-202ENST00000375340 LAMA2P24043 3122 aaKnown RBP4.7□□□□□ -1.66
SMC1A-202ENST00000375340 PRO0461Q9UI25 63 aa4.7□□□□□ -1.66
SMC1A-202ENST00000375340 ODF3L2Q3SX64 289 aa4.69□□□□□ -1.66
SMC1A-202ENST00000375340 MPLKIPQ8TAP9 179 aa4.69□□□□□ -1.66
SMC1A-202ENST00000375340 RMI2Q96E14 147 aa4.69□□□□□ -1.66
SMC1A-202ENST00000375340 UNC80Q8N2C7 3258 aa4.69□□□□□ -1.66
SMC1A-202ENST00000375340 XIRP2A4UGR9 3374 aa4.69□□□□□ -1.66
SMC1A-202ENST00000375340 SMR3AQ99954 134 aa4.69□□□□□ -1.66
SMC1A-202ENST00000375340 C3orf84H3BNL1 204 aa4.68□□□□□ -1.66
SMC1A-202ENST00000375340 Q9UF83 564 aa4.68□□□□□ -1.66
SMC1A-202ENST00000375340 C1orf158Q8N1D5 194 aa4.68□□□□□ -1.66
SMC1A-202ENST00000375340 LINC00315P59091 139 aa4.68□□□□□ -1.66
SMC1A-202ENST00000375340 IGKV2-28A0A075B6P5 120 aa4.68□□□□□ -1.66
SMC1A-202ENST00000375340 IGKV2D-28P01615 120 aa4.68□□□□□ -1.66
SMC1A-202ENST00000375340 TMEM258P61165 79 aa4.68□□□□□ -1.66
SMC1A-202ENST00000375340 INAFM1C9JVW0 142 aa4.68□□□□□ -1.66
SMC1A-202ENST00000375340 LRRC75A-AS1Q8N1F1 130 aa4.68□□□□□ -1.66
SMC1A-202ENST00000375340 FAM236DA0A1B0GTK5 79 aa4.68□□□□□ -1.66
SMC1A-202ENST00000375340 FAM236CP0DP71 79 aa4.68□□□□□ -1.66
SMC1A-202ENST00000375340 KLK5Q9Y337 293 aaPredicted RBP4.68□□□□□ -1.66
SMC1A-202ENST00000375340 C6orf223Q8N319 242 aa4.67□□□□□ -1.66
SMC1A-202ENST00000375340 LYRM9A8MSI8 78 aa4.67□□□□□ -1.66
SMC1A-202ENST00000375340 LINC01006Q8NI28 216 aa4.67□□□□□ -1.66
SMC1A-202ENST00000375340 FAM19A5Q7Z5A7 132 aaPredicted RBP4.67□□□□□ -1.66
SMC1A-202ENST00000375340 ACANP16112 2415 aa4.67□□□□□ -1.66
SMC1A-202ENST00000375340 USP34Q70CQ2 3546 aa4.67□□□□□ -1.66
SMC1A-202ENST00000375340 USP17L23D6RBM5 183 aa4.67□□□□□ -1.66
SMC1A-202ENST00000375340 EPG5Q9HCE0 2579 aa4.67□□□□□ -1.66
SMC1A-202ENST00000375340 CCKP06307 115 aa4.66□□□□□ -1.66
SMC1A-202ENST00000375340 RPL37AP8A6NKH3 93 aa4.66□□□□□ -1.66
SMC1A-202ENST00000375340 CD164L2Q6UWJ8 174 aa4.66□□□□□ -1.66
SMC1A-202ENST00000375340 C5orf47Q569G3 176 aa4.66□□□□□ -1.66
SMC1A-202ENST00000375340 A8MTW9 85 aa4.66□□□□□ -1.66
SMC1A-202ENST00000375340 H3BQ85 93 aa4.66□□□□□ -1.66
SMC1A-202ENST00000375340 BRK1Q8WUW1 75 aa4.66□□□□□ -1.66
SMC1A-202ENST00000375340 COX7CP15954 63 aa4.66□□□□□ -1.66
SMC1A-202ENST00000375340 FHL2Q14192 279 aa4.66□□□□□ -1.66
SMC1A-202ENST00000375340 IGKV2-24A0A0C4DH68 120 aa4.66□□□□□ -1.66
SMC1A-202ENST00000375340 Q8N814 137 aa4.66□□□□□ -1.66
SMC1A-202ENST00000375340 Q6JHZ5 121 aa4.65□□□□□ -1.66
SMC1A-202ENST00000375340 Q6ZQY7 126 aa4.65□□□□□ -1.66
SMC1A-202ENST00000375340 SERP2Q8N6R1 65 aa4.65□□□□□ -1.66
SMC1A-202ENST00000375340 LY6G6DO95868 133 aa4.65□□□□□ -1.66
SMC1A-202ENST00000375340 Q6Q795 121 aa4.65□□□□□ -1.66
SMC1A-202ENST00000375340 C11orf72Q8NBR9 251 aa4.65□□□□□ -1.67
SMC1A-202ENST00000375340 RETNQ9HD89 108 aa4.65□□□□□ -1.67
SMC1A-202ENST00000375340 FAM240AA0A1B0GVK7 77 aa4.65□□□□□ -1.67
SMC1A-202ENST00000375340 FHL3Q13643 280 aa4.65□□□□□ -1.67
SMC1A-202ENST00000375340 ATP5EP2Q5VTU8 51 aa4.65□□□□□ -1.67
SMC1A-202ENST00000375340 FAM218AQ96MZ4 157 aa4.65□□□□□ -1.67
SMC1A-202ENST00000375340 UBE2AP49459 152 aa4.65□□□□□ -1.67
SMC1A-202ENST00000375340 FAM30AQ9NZY2 134 aa4.65□□□□□ -1.67
SMC1A-202ENST00000375340 HILS1P60008 231 aa4.64□□□□□ -1.67
SMC1A-202ENST00000375340 LINC00337Q8N6G1 96 aa4.64□□□□□ -1.67
SMC1A-202ENST00000375340 BPY2O14599 106 aa4.64□□□□□ -1.67
SMC1A-202ENST00000375340 BEAN1Q3B7T3 259 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms