RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 CRPP02741 224 aa12.37□□□□□ -0.43
CDX4-201ENST00000373514 NFE4Q86UQ8 179 aa12.37□□□□□ -0.43
CDX4-201ENST00000373514 CDC42SE2Q9NRR3 84 aa12.37□□□□□ -0.43
CDX4-201ENST00000373514 PAM16Q9Y3D7 125 aa12.37□□□□□ -0.43
CDX4-201ENST00000373514 EPPK1P58107 5090 aaKnown RBP12.36□□□□□ -0.43
CDX4-201ENST00000373514 PLNP26678 52 aa12.36□□□□□ -0.43
CDX4-201ENST00000373514 ZNF664Q8N3J9 261 aa12.36□□□□□ -0.43
CDX4-201ENST00000373514 IGLV4-69A0A075B6H9 119 aa12.35□□□□□ -0.43
CDX4-201ENST00000373514 TRAV8-3A0A0A6YYJ7 113 aa12.35□□□□□ -0.43
CDX4-201ENST00000373514 hDV102S1A0JD36 115 aa12.35□□□□□ -0.43
CDX4-201ENST00000373514 C2orf88Q9BSF0 95 aa12.35□□□□□ -0.43
CDX4-201ENST00000373514 PRR34Q9NV39 138 aa12.35□□□□□ -0.43
CDX4-201ENST00000373514 A0A1B0GVY2 172 aa12.34□□□□□ -0.43
CDX4-201ENST00000373514 REG3AQ06141 175 aa12.34□□□□□ -0.43
CDX4-201ENST00000373514 IGKV2D-24A0A075B6R9 120 aa12.33□□□□□ -0.44
CDX4-201ENST00000373514 HSBP1L1C9JCN9 74 aa12.33□□□□□ -0.44
CDX4-201ENST00000373514 SPATA45Q537H7 98 aa12.33□□□□□ -0.44
CDX4-201ENST00000373514 IGKV3OR2-268A0A0C4DH90 116 aa12.32□□□□□ -0.44
CDX4-201ENST00000373514 C11orf86A6NJI1 115 aa12.32□□□□□ -0.44
CDX4-201ENST00000373514 PSCAO43653 123 aa12.32□□□□□ -0.44
CDX4-201ENST00000373514 IGLV10-54A0A075B6I4 117 aa12.32□□□□□ -0.44
CDX4-201ENST00000373514 A0A0J9YXV3 536 aa12.32□□□□□ -0.44
CDX4-201ENST00000373514 MAPKAPK5-AS1Q8N8E1 139 aa12.32□□□□□ -0.44
CDX4-201ENST00000373514 IGLC3P0DOY3 106 aa12.31□□□□□ -0.44
CDX4-201ENST00000373514 UBE2D1P51668 147 aa12.31□□□□□ -0.44
CDX4-201ENST00000373514 STPG4Q8N801 248 aa12.31□□□□□ -0.44
CDX4-201ENST00000373514 HECTD4Q9Y4D8 3996 aa12.31□□□□□ -0.44
CDX4-201ENST00000373514 PKD1P98161 4303 aa12.3□□□□□ -0.44
CDX4-201ENST00000373514 WFDC2Q14508 124 aa12.3□□□□□ -0.44
CDX4-201ENST00000373514 MIAQ16674 131 aa12.3□□□□□ -0.44
CDX4-201ENST00000373514 CHAC1Q9BUX1 264 aa12.3□□□□□ -0.44
CDX4-201ENST00000373514 C1orf43Q9BWL3 253 aa12.3□□□□□ -0.44
CDX4-201ENST00000373514 RMI2Q96E14 147 aa12.29□□□□□ -0.44
CDX4-201ENST00000373514 PRO1933Q9H354 126 aa12.29□□□□□ -0.44
CDX4-201ENST00000373514 TRAV13-1A0A0B4J241 112 aa12.28□□□□□ -0.44
CDX4-201ENST00000373514 LECT2O14960 151 aa12.28□□□□□ -0.44
CDX4-201ENST00000373514 ANKRD39Q53RE8 183 aa12.28□□□□□ -0.44
CDX4-201ENST00000373514 TM2D2Q9BX73 214 aa12.28□□□□□ -0.44
CDX4-201ENST00000373514 A0A087WTM6 91 aa12.27□□□□□ -0.44
CDX4-201ENST00000373514 TINCRA0A1B0GVN0 87 aa12.27□□□□□ -0.44
CDX4-201ENST00000373514 LRCOL1A6NCL2 159 aa12.27□□□□□ -0.44
CDX4-201ENST00000373514 KRTAP26-1Q6PEX3 210 aa12.27□□□□□ -0.44
CDX4-201ENST00000373514 FUSP35637 526 aaKnown RBP eCLIP12.27□□□□□ -0.45
CDX4-201ENST00000373514 TMEM170BQ5T4T1 132 aa12.27□□□□□ -0.45
CDX4-201ENST00000373514 FAM19A3Q7Z5A8 133 aa12.27□□□□□ -0.45
CDX4-201ENST00000373514 DNAH11Q96DT5 4516 aa12.26□□□□□ -0.45
CDX4-201ENST00000373514 ZNF22P17026 224 aaPredicted RBP12.25□□□□□ -0.45
CDX4-201ENST00000373514 KRTAP10-2P60368 255 aa12.25□□□□□ -0.45
CDX4-201ENST00000373514 LINC00242Q5T6M2 205 aa12.25□□□□□ -0.45
CDX4-201ENST00000373514 GEMIN7Q9H840 131 aaKnown RBP12.25□□□□□ -0.45
CDX4-201ENST00000373514 TSTD3H0UI37 97 aa12.24□□□□□ -0.45
CDX4-201ENST00000373514 COX11Q9Y6N1 276 aa12.24□□□□□ -0.45
CDX4-201ENST00000373514 SEC11AP67812 179 aa12.23□□□□□ -0.45
CDX4-201ENST00000373514 COX6A2Q02221 97 aa12.23□□□□□ -0.45
CDX4-201ENST00000373514 LINC00959A0A1B0GUT2 108 aa12.22□□□□□ -0.45
CDX4-201ENST00000373514 HERVK_113P63121 156 aa12.22□□□□□ -0.45
CDX4-201ENST00000373514 LINC00469Q8N7U9 141 aa12.22□□□□□ -0.45
CDX4-201ENST00000373514 CHCHD10Q8WYQ3 142 aaPredicted RBP12.22□□□□□ -0.45
CDX4-201ENST00000373514 C14orf144Q96I85 54 aa12.22□□□□□ -0.45
CDX4-201ENST00000373514 IGKV2D-26A0A0A0MRZ7 120 aa12.21□□□□□ -0.45
CDX4-201ENST00000373514 TRAV8-4A0A0B4J246 113 aa12.21□□□□□ -0.45
CDX4-201ENST00000373514 NMUP48645 174 aa12.21□□□□□ -0.45
CDX4-201ENST00000373514 HERVK_113P61574 105 aa12.21□□□□□ -0.45
CDX4-201ENST00000373514 IGLV5-45A0A087WSX0 123 aa12.21□□□□□ -0.46
CDX4-201ENST00000373514 TMEM223A0PJW6 202 aa12.21□□□□□ -0.46
CDX4-201ENST00000373514 GAGE12HA6NDE8 117 aa12.21□□□□□ -0.46
CDX4-201ENST00000373514 PCP4L1A6NKN8 68 aa12.21□□□□□ -0.46
CDX4-201ENST00000373514 CDKN2A-AS1Q9UH64 79 aa12.21□□□□□ -0.46
CDX4-201ENST00000373514 CCL25O15444 150 aa12.2□□□□□ -0.46
CDX4-201ENST00000373514 Q8N814 137 aa12.2□□□□□ -0.46
CDX4-201ENST00000373514 PKHD1P08F94 4074 aa12.2□□□□□ -0.46
CDX4-201ENST00000373514 E9PLD3 99 aa12.19□□□□□ -0.46
CDX4-201ENST00000373514 EREGO14944 169 aa12.19□□□□□ -0.46
CDX4-201ENST00000373514 XCL1P47992 114 aa12.19□□□□□ -0.46
CDX4-201ENST00000373514 SS18Q15532 418 aa12.19□□□□□ -0.46
CDX4-201ENST00000373514 USP17L23D6RBM5 183 aa12.18□□□□□ -0.46
CDX4-201ENST00000373514 COX8AP10176 69 aa12.18□□□□□ -0.46
CDX4-201ENST00000373514 UQCR10Q9UDW1 63 aa12.18□□□□□ -0.46
CDX4-201ENST00000373514 H3BRM9 83 aa12.17□□□□□ -0.46
CDX4-201ENST00000373514 FOXI1Q12951 378 aa12.17□□□□□ -0.46
CDX4-201ENST00000373514 PCP2Q8IVA1 136 aa12.17□□□□□ -0.46
CDX4-201ENST00000373514 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.16□□□□□ -0.46
CDX4-201ENST00000373514 IGHV3-64A0A075B6Q5 118 aa12.16□□□□□ -0.46
CDX4-201ENST00000373514 SPINK8P0C7L1 97 aa12.16□□□□□ -0.46
CDX4-201ENST00000373514 SLC25A34Q6PIV7 304 aa12.16□□□□□ -0.46
CDX4-201ENST00000373514 MIEN1Q9BRT3 115 aa12.16□□□□□ -0.46
CDX4-201ENST00000373514 TP73-AS1Q9UF72 201 aa12.16□□□□□ -0.46
CDX4-201ENST00000373514 TTTY13Q9BZ97 58 aa12.15□□□□□ -0.46
CDX4-201ENST00000373514 IGHV3OR16-9A0A0B4J2B5 98 aa12.14□□□□□ -0.47
CDX4-201ENST00000373514 IGHV1-58A0A0C4DH39 117 aa12.14□□□□□ -0.47
CDX4-201ENST00000373514 LEPROTO15243 131 aa12.14□□□□□ -0.47
CDX4-201ENST00000373514 DDTP30046 118 aa12.14□□□□□ -0.47
CDX4-201ENST00000373514 BOD1L2Q8IYS8 172 aa12.14□□□□□ -0.47
CDX4-201ENST00000373514 DNAH5Q8TE73 4624 aa12.14□□□□□ -0.47
CDX4-201ENST00000373514 BIRC6Q9NR09 4857 aa12.14□□□□□ -0.47
CDX4-201ENST00000373514 C16orf90A8MZG2 172 aa12.13□□□□□ -0.47
CDX4-201ENST00000373514 TSPEAR-AS2P59090 65 aa12.13□□□□□ -0.47
CDX4-201ENST00000373514 C15orf56Q8N910 161 aa12.13□□□□□ -0.47
CDX4-201ENST00000373514 CD164L2Q6UWJ8 174 aa12.12□□□□□ -0.47
CDX4-201ENST00000373514 PLEKHB2Q96CS7 222 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms