RNA–Protein interactions for RNA: ENST00000373463.7

TMEM54-202, Transcript of transmembrane protein 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM54, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-202ENST00000373463 INAFM2P0DMQ5 153 aa13.53□□□□□ -0.24
TMEM54-202ENST00000373463 COX6A2Q02221 97 aa13.53□□□□□ -0.24
TMEM54-202ENST00000373463 COX19Q49B96 90 aa13.53□□□□□ -0.24
TMEM54-202ENST00000373463 SVBPQ8N300 66 aa13.53□□□□□ -0.24
TMEM54-202ENST00000373463 MT-ND6P03923 174 aa13.52□□□□□ -0.25
TMEM54-202ENST00000373463 TMEM141Q96I45 108 aa13.52□□□□□ -0.25
TMEM54-202ENST00000373463 IGLV4-69A0A075B6H9 119 aa13.51□□□□□ -0.25
TMEM54-202ENST00000373463 LINC01546A6NGU7 62 aa13.51□□□□□ -0.25
TMEM54-202ENST00000373463 SNAPINO95295 136 aa13.51□□□□□ -0.25
TMEM54-202ENST00000373463 MALP21145 153 aa13.51□□□□□ -0.25
TMEM54-202ENST00000373463 LINC00242Q5T6M2 205 aa13.51□□□□□ -0.25
TMEM54-202ENST00000373463 SPACA4Q8TDM5 124 aa13.51□□□□□ -0.25
TMEM54-202ENST00000373463 CARD19Q96LW7 228 aa13.5□□□□□ -0.25
TMEM54-202ENST00000373463 YPEL4Q96NS1 127 aa13.5□□□□□ -0.25
TMEM54-202ENST00000373463 AMELXQ99217 191 aa13.5□□□□□ -0.25
TMEM54-202ENST00000373463 ZNF561-AS1K7EIQ3 104 aa13.49□□□□□ -0.25
TMEM54-202ENST00000373463 UBE2D1P51668 147 aa13.49□□□□□ -0.25
TMEM54-202ENST00000373463 FABP9Q0Z7S8 132 aa13.49□□□□□ -0.25
TMEM54-202ENST00000373463 NDUFA5Q16718 116 aa13.49□□□□□ -0.25
TMEM54-202ENST00000373463 A0A087WYN8 130 aa13.48□□□□□ -0.25
TMEM54-202ENST00000373463 A0A096LNI7 61 aa13.48□□□□□ -0.25
TMEM54-202ENST00000373463 SYCNQ0VAF6 134 aa13.48□□□□□ -0.25
TMEM54-202ENST00000373463 Q6ZRU5 148 aa13.48□□□□□ -0.25
TMEM54-202ENST00000373463 TOMM6Q96B49 74 aa13.48□□□□□ -0.25
TMEM54-202ENST00000373463 TEX43Q6ZNM6 134 aa13.47□□□□□ -0.25
TMEM54-202ENST00000373463 FLG2Q5D862 2391 aaPredicted RBP13.47□□□□□ -0.25
TMEM54-202ENST00000373463 PLA2G1BP04054 148 aaKnown RBP13.46□□□□□ -0.25
TMEM54-202ENST00000373463 NPSP0C0P6 89 aa13.46□□□□□ -0.25
TMEM54-202ENST00000373463 SPAG11BQ08648 103 aa13.46□□□□□ -0.25
TMEM54-202ENST00000373463 IGKV2-24A0A0C4DH68 120 aa13.45□□□□□ -0.26
TMEM54-202ENST00000373463 SLC7A5P1Q8MH63 180 aa13.45□□□□□ -0.26
TMEM54-202ENST00000373463 URB1-AS1Q96HZ7 61 aa13.45□□□□□ -0.26
TMEM54-202ENST00000373463 C2orf48Q96LS8 159 aa13.45□□□□□ -0.26
TMEM54-202ENST00000373463 A0A087WZ39 114 aa13.44□□□□□ -0.26
TMEM54-202ENST00000373463 APOMO95445 188 aa13.44□□□□□ -0.26
TMEM54-202ENST00000373463 OR10D4PQ8NGN7 298 aa13.44□□□□□ -0.26
TMEM54-202ENST00000373463 ORAOV1Q8WV07 137 aa13.44□□□□□ -0.26
TMEM54-202ENST00000373463 TIMM17AQ99595 171 aa13.44□□□□□ -0.26
TMEM54-202ENST00000373463 VCX2Q9H322 139 aa13.44□□□□□ -0.26
TMEM54-202ENST00000373463 PLAC8Q9NZF1 115 aa13.44□□□□□ -0.26
TMEM54-202ENST00000373463 TRAPPC1Q9Y5R8 145 aa13.44□□□□□ -0.26
TMEM54-202ENST00000373463 Q6ZN92 141 aa13.43□□□□□ -0.26
TMEM54-202ENST00000373463 FAM19A3Q7Z5A8 133 aa13.43□□□□□ -0.26
TMEM54-202ENST00000373463 MYCBP2O75592 4640 aa13.43□□□□□ -0.26
TMEM54-202ENST00000373463 C18orf32Q8TCD1 76 aa13.42□□□□□ -0.26
TMEM54-202ENST00000373463 CAMK2N2Q96S95 79 aa13.42□□□□□ -0.26
TMEM54-202ENST00000373463 C2orf88Q9BSF0 95 aa13.42□□□□□ -0.26
TMEM54-202ENST00000373463 KIAA0087Q14695 138 aa13.41□□□□□ -0.26
TMEM54-202ENST00000373463 MAJINQ3KP22 176 aa13.41□□□□□ -0.26
TMEM54-202ENST00000373463 ERASQ7Z444 233 aa13.41□□□□□ -0.26
TMEM54-202ENST00000373463 A0A096LNJ9 63 aa13.4□□□□□ -0.26
TMEM54-202ENST00000373463 G0S2P27469 103 aa13.4□□□□□ -0.26
TMEM54-202ENST00000373463 C10orf25Q5T742 122 aa13.4□□□□□ -0.26
TMEM54-202ENST00000373463 A0A0J9YXV3 536 aa13.39□□□□□ -0.27
TMEM54-202ENST00000373463 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.39□□□□□ -0.27
TMEM54-202ENST00000373463 FA2HQ7L5A8 372 aa13.39□□□□□ -0.27
TMEM54-202ENST00000373463 CBLN2Q8IUK8 224 aa13.39□□□□□ -0.27
TMEM54-202ENST00000373463 DPH3Q96FX2 82 aa13.39□□□□□ -0.27
TMEM54-202ENST00000373463 SCGB3A1Q96QR1 104 aa13.39□□□□□ -0.27
TMEM54-202ENST00000373463 HNRNPA3P51991 378 aaKnown RBP13.38□□□□□ -0.27
TMEM54-202ENST00000373463 RPL37AP61513 92 aaKnown RBP13.38□□□□□ -0.27
TMEM54-202ENST00000373463 STPG4Q8N801 248 aa13.38□□□□□ -0.27
TMEM54-202ENST00000373463 PTTG1IPP53801 180 aa13.37□□□□□ -0.27
TMEM54-202ENST00000373463 LOC107984640A0A0U1RRK4 108 aa13.36□□□□□ -0.27
TMEM54-202ENST00000373463 PAPPA-AS1Q5QFB9 102 aa13.36□□□□□ -0.27
TMEM54-202ENST00000373463 UNQ6190/PRO20217Q6UXQ8 127 aa13.36□□□□□ -0.27
TMEM54-202ENST00000373463 LINC01561Q8N1V8 128 aa13.36□□□□□ -0.27
TMEM54-202ENST00000373463 SMCO4Q9NRQ5 59 aa13.36□□□□□ -0.27
TMEM54-202ENST00000373463 MRPL35Q9NZE8 188 aaKnown RBP13.36□□□□□ -0.27
TMEM54-202ENST00000373463 RNF151Q2KHN1 245 aa13.35□□□□□ -0.27
TMEM54-202ENST00000373463 C6orf48Q9UBA6 75 aa13.35□□□□□ -0.27
TMEM54-202ENST00000373463 CDKN2A-AS1Q9UH64 79 aa13.35□□□□□ -0.27
TMEM54-202ENST00000373463 F8WDY8 70 aa13.34□□□□□ -0.27
TMEM54-202ENST00000373463 GAGE2BQ13066 116 aa13.34□□□□□ -0.27
TMEM54-202ENST00000373463 PKIGQ9Y2B9 76 aa13.34□□□□□ -0.27
TMEM54-202ENST00000373463 LINC01549A6NIU2 74 aa13.33□□□□□ -0.28
TMEM54-202ENST00000373463 NDUFA1O15239 70 aa13.33□□□□□ -0.28
TMEM54-202ENST00000373463 LINC00614P0C842 121 aa13.33□□□□□ -0.28
TMEM54-202ENST00000373463 C2orf82Q6UX34 121 aa13.33□□□□□ -0.28
TMEM54-202ENST00000373463 LINC00474Q9P2X8 69 aa13.33□□□□□ -0.28
TMEM54-202ENST00000373463 HERVK_113P63121 156 aa13.32□□□□□ -0.28
TMEM54-202ENST00000373463 PMCHL1Q16048 86 aa13.32□□□□□ -0.28
TMEM54-202ENST00000373463 CST9LQ9H4G1 147 aa13.32□□□□□ -0.28
TMEM54-202ENST00000373463 PKHD1L1Q86WI1 4243 aa13.32□□□□□ -0.28
TMEM54-202ENST00000373463 A0A1W2PNN7 141 aa13.31□□□□□ -0.28
TMEM54-202ENST00000373463 IGLV5-45A0A087WSX0 123 aa13.29□□□□□ -0.28
TMEM54-202ENST00000373463 SEC11AP67812 179 aa13.29□□□□□ -0.28
TMEM54-202ENST00000373463 RPL18AQ02543 176 aaKnown RBP13.29□□□□□ -0.28
TMEM54-202ENST00000373463 PMVKQ15126 192 aa13.29□□□□□ -0.28
TMEM54-202ENST00000373463 PDZD11Q5EBL8 140 aa13.29□□□□□ -0.28
TMEM54-202ENST00000373463 GEMIN7Q9H840 131 aaKnown RBP13.29□□□□□ -0.28
TMEM54-202ENST00000373463 TINCRA0A1B0GVN0 87 aa13.28□□□□□ -0.28
TMEM54-202ENST00000373463 TLX1NBP0CAT3 122 aa13.28□□□□□ -0.28
TMEM54-202ENST00000373463 Q6ZRP5 223 aa13.28□□□□□ -0.28
TMEM54-202ENST00000373463 HBDP02042 147 aa13.27□□□□□ -0.29
TMEM54-202ENST00000373463 LRP1Q07954 4544 aaKnown RBP13.27□□□□□ -0.29
TMEM54-202ENST00000373463 SMIM1B2RUZ4 78 aa13.26□□□□□ -0.29
TMEM54-202ENST00000373463 C9orf116Q5BN46 136 aaPredicted RBP13.26□□□□□ -0.29
TMEM54-202ENST00000373463 Q8IZM0 81 aa13.26□□□□□ -0.29
TMEM54-202ENST00000373463 LINC00469Q8N7U9 141 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms