RNA–Protein interactions for RNA: ENST00000373057.7

FOXP4-202, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-202ENST00000373057 PEMTQ9UBM1 199 aa13.46□□□□□ -0.26
FOXP4-202ENST00000373057 SETXQ7Z333 2677 aaKnown RBP13.45□□□□□ -0.26
FOXP4-202ENST00000373057 HERVK_113P63121 156 aa13.45□□□□□ -0.26
FOXP4-202ENST00000373057 C5orf38Q86SI9 138 aa13.45□□□□□ -0.26
FOXP4-202ENST00000373057 C11orf72Q8NBR9 251 aa13.44□□□□□ -0.26
FOXP4-202ENST00000373057 FAM218AQ96MZ4 157 aa13.44□□□□□ -0.26
FOXP4-202ENST00000373057 SMIM1B2RUZ4 78 aa13.44□□□□□ -0.26
FOXP4-202ENST00000373057 RNASE1P07998 156 aaKnown RBP13.44□□□□□ -0.26
FOXP4-202ENST00000373057 C9orf153Q5TBE3 101 aa13.44□□□□□ -0.26
FOXP4-202ENST00000373057 FAM19A5Q7Z5A7 132 aaPredicted RBP13.44□□□□□ -0.26
FOXP4-202ENST00000373057 A0A096LPF7 62 aa13.44□□□□□ -0.26
FOXP4-202ENST00000373057 MIR7-3HGQ8N6C7 128 aa13.44□□□□□ -0.26
FOXP4-202ENST00000373057 ZNF469Q96JG9 3925 aaPredicted RBP13.44□□□□□ -0.26
FOXP4-202ENST00000373057 KRTAP10-9P60411 292 aa13.43□□□□□ -0.26
FOXP4-202ENST00000373057 NTM-AS1Q6ZSK4 140 aa13.43□□□□□ -0.26
FOXP4-202ENST00000373057 KLK5Q9Y337 293 aaPredicted RBP13.42□□□□□ -0.26
FOXP4-202ENST00000373057 AKAP9Q99996 3911 aa13.42□□□□□ -0.26
FOXP4-202ENST00000373057 COX7A2LO14548 114 aa13.41□□□□□ -0.26
FOXP4-202ENST00000373057 DEFB114Q30KQ6 69 aa13.41□□□□□ -0.26
FOXP4-202ENST00000373057 F5H768 121 aa13.41□□□□□ -0.26
FOXP4-202ENST00000373057 DNAL4O96015 105 aa13.41□□□□□ -0.26
FOXP4-202ENST00000373057 SLPIP03973 132 aa13.41□□□□□ -0.26
FOXP4-202ENST00000373057 CRPP02741 224 aa13.41□□□□□ -0.26
FOXP4-202ENST00000373057 ODF3L2Q3SX64 289 aa13.41□□□□□ -0.26
FOXP4-202ENST00000373057 Q96MF0 132 aa13.41□□□□□ -0.26
FOXP4-202ENST00000373057 ITPR3Q14573 2671 aa13.4□□□□□ -0.26
FOXP4-202ENST00000373057 PAX4O43316 350 aa13.4□□□□□ -0.26
FOXP4-202ENST00000373057 C1orf158Q8N1D5 194 aa13.4□□□□□ -0.26
FOXP4-202ENST00000373057 TRGV4A0A0C4DH28 118 aa13.39□□□□□ -0.27
FOXP4-202ENST00000373057 SMCR5Q8TEV8 140 aa13.39□□□□□ -0.27
FOXP4-202ENST00000373057 DEFB130BP0DP73 79 aa13.39□□□□□ -0.27
FOXP4-202ENST00000373057 DEFB130AP0DP74 79 aa13.39□□□□□ -0.27
FOXP4-202ENST00000373057 PRORYQ9H606 182 aa13.39□□□□□ -0.27
FOXP4-202ENST00000373057 K7EQD1 137 aa13.39□□□□□ -0.27
FOXP4-202ENST00000373057 TMEM126AQ9H061 195 aa13.39□□□□□ -0.27
FOXP4-202ENST00000373057 IGKV3D-7A0A0C4DH55 119 aa13.38□□□□□ -0.27
FOXP4-202ENST00000373057 Q6YL49 198 aa13.38□□□□□ -0.27
FOXP4-202ENST00000373057 C14orf132Q9NPU4 83 aa13.38□□□□□ -0.27
FOXP4-202ENST00000373057 TIRAPP58753 221 aa13.38□□□□□ -0.27
FOXP4-202ENST00000373057 SND1-IT1Q9HBX3 110 aa13.38□□□□□ -0.27
FOXP4-202ENST00000373057 TMEM243Q9BU79 118 aa13.36□□□□□ -0.27
FOXP4-202ENST00000373057 DNAJC30Q96LL9 226 aa13.35□□□□□ -0.27
FOXP4-202ENST00000373057 USP24Q9UPU5 2620 aa13.35□□□□□ -0.27
FOXP4-202ENST00000373057 SDIM1Q6ZPB5 146 aa13.35□□□□□ -0.27
FOXP4-202ENST00000373057 CDC42SE2Q9NRR3 84 aa13.34□□□□□ -0.27
FOXP4-202ENST00000373057 IGLV4-60A0A075B6I1 120 aa13.33□□□□□ -0.28
FOXP4-202ENST00000373057 XCL1P47992 114 aa13.33□□□□□ -0.28
FOXP4-202ENST00000373057 C9orf129Q5T035 196 aaKnown RBP13.33□□□□□ -0.28
FOXP4-202ENST00000373057 LINC00337Q8N6G1 96 aa13.33□□□□□ -0.28
FOXP4-202ENST00000373057 A0A087WYN8 130 aa13.33□□□□□ -0.28
FOXP4-202ENST00000373057 IGHV4-31P0DP07 118 aa13.33□□□□□ -0.28
FOXP4-202ENST00000373057 C1orf43Q9BWL3 253 aa13.33□□□□□ -0.28
FOXP4-202ENST00000373057 ESM1Q9NQ30 184 aa13.33□□□□□ -0.28
FOXP4-202ENST00000373057 J3KT08 172 aa13.32□□□□□ -0.28
FOXP4-202ENST00000373057 LECT2O14960 151 aa13.32□□□□□ -0.28
FOXP4-202ENST00000373057 IGLV5-39A0A0G2JS06 123 aa13.31□□□□□ -0.28
FOXP4-202ENST00000373057 TIMM17BO60830 172 aa13.31□□□□□ -0.28
FOXP4-202ENST00000373057 COX7B2Q8TF08 81 aa13.31□□□□□ -0.28
FOXP4-202ENST00000373057 HRCT1Q6UXD1 115 aa13.31□□□□□ -0.28
FOXP4-202ENST00000373057 NCR3O14931 201 aa13.3□□□□□ -0.28
FOXP4-202ENST00000373057 PRR3P79522 188 aaKnown RBP13.3□□□□□ -0.28
FOXP4-202ENST00000373057 APCP25054 2843 aa13.3□□□□□ -0.28
FOXP4-202ENST00000373057 NBPF19A0A087WUL8 3843 aa13.29□□□□□ -0.28
FOXP4-202ENST00000373057 BEAN1Q3B7T3 259 aa13.29□□□□□ -0.28
FOXP4-202ENST00000373057 C6orf226Q5I0X4 101 aa13.29□□□□□ -0.28
FOXP4-202ENST00000373057 CCL24O00175 119 aa13.29□□□□□ -0.28
FOXP4-202ENST00000373057 HIST2H2BCQ6DN03 193 aa13.29□□□□□ -0.28
FOXP4-202ENST00000373057 Q6Q795 121 aa13.29□□□□□ -0.28
FOXP4-202ENST00000373057 SMIM11BQ8TCY0 68 aa13.29□□□□□ -0.28
FOXP4-202ENST00000373057 DSCR9P59020 149 aa13.29□□□□□ -0.28
FOXP4-202ENST00000373057 A0A087WVE0 104 aa13.28□□□□□ -0.28
FOXP4-202ENST00000373057 C4orf3Q8WVX3 66 aa13.28□□□□□ -0.28
FOXP4-202ENST00000373057 IGLV5-45A0A087WSX0 123 aa13.28□□□□□ -0.28
FOXP4-202ENST00000373057 MALP21145 153 aa13.28□□□□□ -0.28
FOXP4-202ENST00000373057 PKIGQ9Y2B9 76 aa13.28□□□□□ -0.28
FOXP4-202ENST00000373057 IGLV10-54A0A075B6I4 117 aa13.27□□□□□ -0.28
FOXP4-202ENST00000373057 COPS9Q8WXC6 57 aa13.27□□□□□ -0.29
FOXP4-202ENST00000373057 J3QLI3 93 aa13.25□□□□□ -0.29
FOXP4-202ENST00000373057 CCL18P55774 89 aa13.25□□□□□ -0.29
FOXP4-202ENST00000373057 HIST1H4AP62805 103 aaKnown RBP13.25□□□□□ -0.29
FOXP4-202ENST00000373057 DEFB4AO15263 64 aa13.25□□□□□ -0.29
FOXP4-202ENST00000373057 TRAV13-2A0A0B4J235 113 aa13.24□□□□□ -0.29
FOXP4-202ENST00000373057 IGKV2-28A0A075B6P5 120 aa13.24□□□□□ -0.29
FOXP4-202ENST00000373057 FAM240AA0A1B0GVK7 77 aa13.24□□□□□ -0.29
FOXP4-202ENST00000373057 IGKV2D-28P01615 120 aa13.24□□□□□ -0.29
FOXP4-202ENST00000373057 LINC00643Q86TS7 51 aa13.24□□□□□ -0.29
FOXP4-202ENST00000373057 C4orf26Q17RF5 130 aa13.23□□□□□ -0.29
FOXP4-202ENST00000373057 WFDC9Q8NEX5 89 aa13.23□□□□□ -0.29
FOXP4-202ENST00000373057 CR1P17927 2039 aa13.22□□□□□ -0.29
FOXP4-202ENST00000373057 TRACP01848 142 aa13.22□□□□□ -0.29
FOXP4-202ENST00000373057 ITPR2Q14571 2701 aa13.22□□□□□ -0.29
FOXP4-202ENST00000373057 A0A096LNT2 108 aa13.21□□□□□ -0.3
FOXP4-202ENST00000373057 INAFM2P0DMQ5 153 aa13.21□□□□□ -0.3
FOXP4-202ENST00000373057 TRBV10-1A0A0K0K1A3 114 aa13.2□□□□□ -0.3
FOXP4-202ENST00000373057 TRBV7-7A0A0K0K1E9 115 aa13.2□□□□□ -0.3
FOXP4-202ENST00000373057 RNF152Q8N8N0 203 aa13.2□□□□□ -0.3
FOXP4-202ENST00000373057 ACYP1P07311 99 aa13.19□□□□□ -0.3
FOXP4-202ENST00000373057 LINC00526Q96FQ7 95 aa13.19□□□□□ -0.3
FOXP4-202ENST00000373057 hADV29S1A0JD25 119 aa13.19□□□□□ -0.3
FOXP4-202ENST00000373057 DNAJC9-AS1A6NH13 148 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms