RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 ZNF415Q09FC8 603 aa3.9□□□□□ -1.78
ATG4A-204ENST00000372246 KLRB1Q12918 225 aa3.9□□□□□ -1.78
ATG4A-204ENST00000372246 FAM223AQ8IWN6 122 aa3.9□□□□□ -1.78
ATG4A-204ENST00000372246 LINC00308Q8TCZ7 52 aa3.9□□□□□ -1.78
ATG4A-204ENST00000372246 NAV2Q8IVL1 2488 aa3.9□□□□□ -1.79
ATG4A-204ENST00000372246 BAALC-AS2P0C853 105 aa3.9□□□□□ -1.79
ATG4A-204ENST00000372246 SPANXDQ9BXN6 97 aa3.9□□□□□ -1.79
ATG4A-204ENST00000372246 C11orf68Q9H3H3 251 aaKnown RBP3.9□□□□□ -1.79
ATG4A-204ENST00000372246 C14orf132Q9NPU4 83 aa3.9□□□□□ -1.79
ATG4A-204ENST00000372246 FN1P02751 2386 aaKnown RBP3.9□□□□□ -1.79
ATG4A-204ENST00000372246 PIEZO1Q92508 2521 aa3.9□□□□□ -1.79
ATG4A-204ENST00000372246 IGHV4-59P01825 116 aa3.89□□□□□ -1.79
ATG4A-204ENST00000372246 LCE4AQ5TA78 99 aa3.89□□□□□ -1.79
ATG4A-204ENST00000372246 ABCA12Q86UK0 2595 aa3.89□□□□□ -1.79
ATG4A-204ENST00000372246 A0A087WYN8 130 aa3.89□□□□□ -1.79
ATG4A-204ENST00000372246 H3BT86 120 aa3.89□□□□□ -1.79
ATG4A-204ENST00000372246 OXTP01178 125 aa3.89□□□□□ -1.79
ATG4A-204ENST00000372246 DEFB131AP59861 70 aa3.89□□□□□ -1.79
ATG4A-204ENST00000372246 C4orf26Q17RF5 130 aa3.89□□□□□ -1.79
ATG4A-204ENST00000372246 Q96MF0 132 aa3.89□□□□□ -1.79
ATG4A-204ENST00000372246 TOMM7Q9P0U1 55 aa3.89□□□□□ -1.79
ATG4A-204ENST00000372246 APCP25054 2843 aa3.88□□□□□ -1.79
ATG4A-204ENST00000372246 TRBV7-7A0A0K0K1E9 115 aa3.88□□□□□ -1.79
ATG4A-204ENST00000372246 TMEM89A2RUT3 159 aa3.88□□□□□ -1.79
ATG4A-204ENST00000372246 UBE2E2Q96LR5 201 aa3.88□□□□□ -1.79
ATG4A-204ENST00000372246 DSCR8Q96T75 97 aa3.88□□□□□ -1.79
ATG4A-204ENST00000372246 ZFYVE26Q68DK2 2539 aa3.88□□□□□ -1.79
ATG4A-204ENST00000372246 NCR3O14931 201 aa3.88□□□□□ -1.79
ATG4A-204ENST00000372246 RPL35AP18077 110 aaKnown RBP3.88□□□□□ -1.79
ATG4A-204ENST00000372246 NBL1P41271 181 aa3.88□□□□□ -1.79
ATG4A-204ENST00000372246 SLURP1P55000 103 aa3.88□□□□□ -1.79
ATG4A-204ENST00000372246 HILS1P60008 231 aa3.88□□□□□ -1.79
ATG4A-204ENST00000372246 KHDC1LQ5JSQ8 128 aa3.88□□□□□ -1.79
ATG4A-204ENST00000372246 LINC00242Q5T6M2 205 aa3.88□□□□□ -1.79
ATG4A-204ENST00000372246 LCE1DQ5T752 114 aa3.88□□□□□ -1.79
ATG4A-204ENST00000372246 DGAT2L7PQ6IED9 249 aa3.88□□□□□ -1.79
ATG4A-204ENST00000372246 PRIMA1Q86XR5 153 aa3.88□□□□□ -1.79
ATG4A-204ENST00000372246 C3orf22Q8N5N4 141 aa3.88□□□□□ -1.79
ATG4A-204ENST00000372246 C11orf44Q8N8P7 122 aa3.88□□□□□ -1.79
ATG4A-204ENST00000372246 LOC100131303A0A0U1RQF7 123 aa3.87□□□□□ -1.79
ATG4A-204ENST00000372246 KLK9Q2XQG4 91 aa3.87□□□□□ -1.79
ATG4A-204ENST00000372246 BEAN1Q3B7T3 259 aa3.87□□□□□ -1.79
ATG4A-204ENST00000372246 FAM19A1Q7Z5A9 133 aa3.87□□□□□ -1.79
ATG4A-204ENST00000372246 LINC00526Q96FQ7 95 aa3.87□□□□□ -1.79
ATG4A-204ENST00000372246 XCL2Q9UBD3 114 aa3.87□□□□□ -1.79
ATG4A-204ENST00000372246 GCN1Q92616 2671 aaKnown RBP3.87□□□□□ -1.79
ATG4A-204ENST00000372246 LRRK2Q5S007 2527 aa3.87□□□□□ -1.79
ATG4A-204ENST00000372246 K7EQG2 157 aa3.87□□□□□ -1.79
ATG4A-204ENST00000372246 COX7A2LO14548 114 aa3.87□□□□□ -1.79
ATG4A-204ENST00000372246 SNRPD3P62318 126 aaKnown RBP3.87□□□□□ -1.79
ATG4A-204ENST00000372246 PRR3P79522 188 aaKnown RBP3.87□□□□□ -1.79
ATG4A-204ENST00000372246 HRCT1Q6UXD1 115 aa3.87□□□□□ -1.79
ATG4A-204ENST00000372246 NTM-AS1Q6ZSK4 140 aa3.87□□□□□ -1.79
ATG4A-204ENST00000372246 LINC00337Q8N6G1 96 aa3.87□□□□□ -1.79
ATG4A-204ENST00000372246 C2orf48Q96LS8 159 aa3.87□□□□□ -1.79
ATG4A-204ENST00000372246 MYO18BQ8IUG5 2567 aa3.87□□□□□ -1.79
ATG4A-204ENST00000372246 IGHV4-30-2A0A087WSY4 118 aa3.86□□□□□ -1.79
ATG4A-204ENST00000372246 SMIM1B2RUZ4 78 aa3.86□□□□□ -1.79
ATG4A-204ENST00000372246 PFN2P35080 140 aa3.86□□□□□ -1.79
ATG4A-204ENST00000372246 KRTAP19-4Q3LI73 84 aa3.86□□□□□ -1.79
ATG4A-204ENST00000372246 DEFB121Q5J5C9 76 aa3.86□□□□□ -1.79
ATG4A-204ENST00000372246 LINC00846Q9NV44 126 aa3.86□□□□□ -1.79
ATG4A-204ENST00000372246 IGKV2-28A0A075B6P5 120 aa3.86□□□□□ -1.79
ATG4A-204ENST00000372246 A6NDX4 124 aa3.86□□□□□ -1.79
ATG4A-204ENST00000372246 UQCRQO14949 82 aa3.86□□□□□ -1.79
ATG4A-204ENST00000372246 NDUFA1O15239 70 aa3.86□□□□□ -1.79
ATG4A-204ENST00000372246 IGKV2D-28P01615 120 aa3.86□□□□□ -1.79
ATG4A-204ENST00000372246 FAM208BQ5VWN6 2430 aa3.86□□□□□ -1.79
ATG4A-204ENST00000372246 CCDC168Q8NDH2 2452 aa3.86□□□□□ -1.79
ATG4A-204ENST00000372246 PRB1P04280 392 aa3.85□□□□□ -1.79
ATG4A-204ENST00000372246 DEFB112Q30KQ8 113 aa3.85□□□□□ -1.79
ATG4A-204ENST00000372246 C1orf195Q5TG92 126 aa3.85□□□□□ -1.79
ATG4A-204ENST00000372246 MIR7-3HGQ8N6C7 128 aa3.85□□□□□ -1.79
ATG4A-204ENST00000372246 USMG5Q96IX5 58 aa3.85□□□□□ -1.79
ATG4A-204ENST00000372246 PYGO1Q9Y3Y4 419 aa3.85□□□□□ -1.79
ATG4A-204ENST00000372246 FAM240AA0A1B0GVK7 77 aa3.85□□□□□ -1.79
ATG4A-204ENST00000372246 CIRBPQ14011 172 aaKnown RBP3.85□□□□□ -1.79
ATG4A-204ENST00000372246 FBXL19-AS1Q494R0 122 aa3.85□□□□□ -1.79
ATG4A-204ENST00000372246 SMIM11BQ8TCY0 68 aa3.85□□□□□ -1.79
ATG4A-204ENST00000372246 CACNA1AO00555 2505 aa3.85□□□□□ -1.79
ATG4A-204ENST00000372246 TRGV1A0A0A0MS02 117 aa3.84□□□□□ -1.79
ATG4A-204ENST00000372246 LECT2O14960 151 aa3.84□□□□□ -1.79
ATG4A-204ENST00000372246 CRYGAP11844 174 aa3.84□□□□□ -1.79
ATG4A-204ENST00000372246 PSMB8P28062 276 aa3.84□□□□□ -1.79
ATG4A-204ENST00000372246 HIST1H4AP62805 103 aaKnown RBP3.84□□□□□ -1.79
ATG4A-204ENST00000372246 Q6ZTI0 123 aa3.84□□□□□ -1.79
ATG4A-204ENST00000372246 LINC00643Q86TS7 51 aa3.84□□□□□ -1.79
ATG4A-204ENST00000372246 LINC01561Q8N1V8 128 aa3.84□□□□□ -1.79
ATG4A-204ENST00000372246 SPATA3Q8NHX4 192 aa3.84□□□□□ -1.79
ATG4A-204ENST00000372246 DPH3Q96FX2 82 aa3.84□□□□□ -1.79
ATG4A-204ENST00000372246 LINC01600Q96MT4 127 aa3.84□□□□□ -1.79
ATG4A-204ENST00000372246 TMEM258P61165 79 aa3.84□□□□□ -1.8
ATG4A-204ENST00000372246 CLPSL2Q6UWE3 100 aa3.84□□□□□ -1.8
ATG4A-204ENST00000372246 C10orf105Q8TEF2 133 aa3.84□□□□□ -1.8
ATG4A-204ENST00000372246 WFDC10AQ9H1F0 79 aa3.84□□□□□ -1.8
ATG4A-204ENST00000372246 A8MTW9 85 aa3.83□□□□□ -1.8
ATG4A-204ENST00000372246 COX7CP15954 63 aa3.83□□□□□ -1.8
ATG4A-204ENST00000372246 CXCL5P42830 114 aa3.83□□□□□ -1.8
ATG4A-204ENST00000372246 LINC00158P58513 81 aa3.83□□□□□ -1.8
ATG4A-204ENST00000372246 C5orf38Q86SI9 138 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms