RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 IFITM10A6NMD0 228 aa12.73□□□□□ -0.37
TMEM53-205ENST00000372244 CHTF8P0CG12 524 aa12.73□□□□□ -0.37
TMEM53-205ENST00000372244 ALKBH7Q9BT30 221 aaPredicted RBP12.73□□□□□ -0.37
TMEM53-205ENST00000372244 MYCBP2O75592 4640 aa12.73□□□□□ -0.37
TMEM53-205ENST00000372244 IGIPA6NJ69 53 aa12.72□□□□□ -0.37
TMEM53-205ENST00000372244 APOC3P02656 99 aa12.72□□□□□ -0.37
TMEM53-205ENST00000372244 NPSP0C0P6 89 aa12.72□□□□□ -0.37
TMEM53-205ENST00000372244 SYCNQ0VAF6 134 aa12.72□□□□□ -0.37
TMEM53-205ENST00000372244 IGLV4-69A0A075B6H9 119 aa12.72□□□□□ -0.37
TMEM53-205ENST00000372244 MT-ND6P03923 174 aa12.72□□□□□ -0.37
TMEM53-205ENST00000372244 DPH3Q96FX2 82 aa12.72□□□□□ -0.37
TMEM53-205ENST00000372244 A0A087WYN8 130 aa12.71□□□□□ -0.38
TMEM53-205ENST00000372244 LINC01546A6NGU7 62 aa12.71□□□□□ -0.38
TMEM53-205ENST00000372244 APOMO95445 188 aa12.71□□□□□ -0.38
TMEM53-205ENST00000372244 LINC00242Q5T6M2 205 aa12.71□□□□□ -0.38
TMEM53-205ENST00000372244 CARD19Q96LW7 228 aa12.71□□□□□ -0.38
TMEM53-205ENST00000372244 AMELXQ99217 191 aa12.71□□□□□ -0.38
TMEM53-205ENST00000372244 G0S2P27469 103 aa12.7□□□□□ -0.38
TMEM53-205ENST00000372244 SVBPQ8N300 66 aa12.7□□□□□ -0.38
TMEM53-205ENST00000372244 C2orf48Q96LS8 159 aa12.7□□□□□ -0.38
TMEM53-205ENST00000372244 PLAC8Q9NZF1 115 aa12.7□□□□□ -0.38
TMEM53-205ENST00000372244 SNAPINO95295 136 aa12.69□□□□□ -0.38
TMEM53-205ENST00000372244 TEX43Q6ZNM6 134 aa12.69□□□□□ -0.38
TMEM53-205ENST00000372244 LINC00173Q6ZV60 143 aa12.69□□□□□ -0.38
TMEM53-205ENST00000372244 TOMM6Q96B49 74 aa12.69□□□□□ -0.38
TMEM53-205ENST00000372244 MRPL18Q9H0U6 180 aaKnown RBP12.69□□□□□ -0.38
TMEM53-205ENST00000372244 UBE2D1P51668 147 aa12.68□□□□□ -0.38
TMEM53-205ENST00000372244 FABP9Q0Z7S8 132 aa12.68□□□□□ -0.38
TMEM53-205ENST00000372244 OR10D4PQ8NGN7 298 aa12.68□□□□□ -0.38
TMEM53-205ENST00000372244 VCX2Q9H322 139 aa12.68□□□□□ -0.38
TMEM53-205ENST00000372244 A0A087WZ39 114 aa12.67□□□□□ -0.38
TMEM53-205ENST00000372244 TGIF2-C20orf24A0A0A6YYL0 155 aa12.67□□□□□ -0.38
TMEM53-205ENST00000372244 NDUFA5Q16718 116 aa12.67□□□□□ -0.38
TMEM53-205ENST00000372244 Q6ZRU5 148 aa12.67□□□□□ -0.38
TMEM53-205ENST00000372244 DMBT1Q9UGM3 2413 aaPredicted RBP12.67□□□□□ -0.38
TMEM53-205ENST00000372244 A0A096LNI7 61 aa12.66□□□□□ -0.38
TMEM53-205ENST00000372244 ZC2HC1BQ5TFG8 222 aa12.66□□□□□ -0.38
TMEM53-205ENST00000372244 PKIGQ9Y2B9 76 aa12.66□□□□□ -0.38
TMEM53-205ENST00000372244 IGKV2-24A0A0C4DH68 120 aa12.65□□□□□ -0.38
TMEM53-205ENST00000372244 SPAG11BQ08648 103 aa12.65□□□□□ -0.38
TMEM53-205ENST00000372244 MAJINQ3KP22 176 aa12.65□□□□□ -0.38
TMEM53-205ENST00000372244 Q6ZN92 141 aa12.65□□□□□ -0.38
TMEM53-205ENST00000372244 CAMK2N2Q96S95 79 aa12.65□□□□□ -0.38
TMEM53-205ENST00000372244 TIMM17AQ99595 171 aa12.65□□□□□ -0.38
TMEM53-205ENST00000372244 LINC00474Q9P2X8 69 aa12.65□□□□□ -0.38
TMEM53-205ENST00000372244 FAM19A3Q7Z5A8 133 aa12.65□□□□□ -0.38
TMEM53-205ENST00000372244 C2orf88Q9BSF0 95 aa12.65□□□□□ -0.38
TMEM53-205ENST00000372244 F8WDY8 70 aa12.64□□□□□ -0.39
TMEM53-205ENST00000372244 RPL37AP61513 92 aaKnown RBP12.64□□□□□ -0.39
TMEM53-205ENST00000372244 RNF151Q2KHN1 245 aa12.64□□□□□ -0.39
TMEM53-205ENST00000372244 PAPPA-AS1Q5QFB9 102 aa12.64□□□□□ -0.39
TMEM53-205ENST00000372244 ERASQ7Z444 233 aa12.64□□□□□ -0.39
TMEM53-205ENST00000372244 ORAOV1Q8WV07 137 aa12.64□□□□□ -0.39
TMEM53-205ENST00000372244 LINC01561Q8N1V8 128 aa12.63□□□□□ -0.39
TMEM53-205ENST00000372244 TRAPPC1Q9Y5R8 145 aa12.63□□□□□ -0.39
TMEM53-205ENST00000372244 LINC01549A6NIU2 74 aa12.62□□□□□ -0.39
TMEM53-205ENST00000372244 KIAA0087Q14695 138 aa12.62□□□□□ -0.39
TMEM53-205ENST00000372244 STPG4Q8N801 248 aa12.62□□□□□ -0.39
TMEM53-205ENST00000372244 LOC107984640A0A0U1RRK4 108 aa12.61□□□□□ -0.39
TMEM53-205ENST00000372244 YPEL4Q96NS1 127 aa12.61□□□□□ -0.39
TMEM53-205ENST00000372244 SCGB3A1Q96QR1 104 aa12.61□□□□□ -0.39
TMEM53-205ENST00000372244 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.6□□□□□ -0.39
TMEM53-205ENST00000372244 PTTG1IPP53801 180 aa12.6□□□□□ -0.39
TMEM53-205ENST00000372244 MRPL35Q9NZE8 188 aaKnown RBP12.6□□□□□ -0.39
TMEM53-205ENST00000372244 C10orf25Q5T742 122 aa12.59□□□□□ -0.39
TMEM53-205ENST00000372244 FA2HQ7L5A8 372 aa12.59□□□□□ -0.39
TMEM53-205ENST00000372244 UNQ6190/PRO20217Q6UXQ8 127 aa12.58□□□□□ -0.4
TMEM53-205ENST00000372244 A0A0J9YXV3 536 aa12.57□□□□□ -0.4
TMEM53-205ENST00000372244 NDUFA1O15239 70 aa12.57□□□□□ -0.4
TMEM53-205ENST00000372244 SEC11AP67812 179 aa12.57□□□□□ -0.4
TMEM53-205ENST00000372244 GAGE2BQ13066 116 aa12.57□□□□□ -0.4
TMEM53-205ENST00000372244 C18orf32Q8TCD1 76 aa12.57□□□□□ -0.4
TMEM53-205ENST00000372244 URB1-AS1Q96HZ7 61 aa12.57□□□□□ -0.4
TMEM53-205ENST00000372244 HERC1Q15751 4861 aa12.57□□□□□ -0.4
TMEM53-205ENST00000372244 HERVK_113P63121 156 aa12.56□□□□□ -0.4
TMEM53-205ENST00000372244 SMCO4Q9NRQ5 59 aa12.56□□□□□ -0.4
TMEM53-205ENST00000372244 KRTAP29-1A8MX34 341 aaPredicted RBP12.55□□□□□ -0.4
TMEM53-205ENST00000372244 HNRNPA3P51991 378 aaKnown RBP12.55□□□□□ -0.4
TMEM53-205ENST00000372244 CDKN2A-AS1Q9UH64 79 aa12.55□□□□□ -0.4
TMEM53-205ENST00000372244 LINC00614P0C842 121 aa12.54□□□□□ -0.4
TMEM53-205ENST00000372244 C7orf33Q8WU49 177 aa12.54□□□□□ -0.4
TMEM53-205ENST00000372244 CST9LQ9H4G1 147 aa12.54□□□□□ -0.4
TMEM53-205ENST00000372244 C6orf48Q9UBA6 75 aa12.54□□□□□ -0.4
TMEM53-205ENST00000372244 LRP1Q07954 4544 aaKnown RBP12.54□□□□□ -0.4
TMEM53-205ENST00000372244 A0A096LNJ9 63 aa12.53□□□□□ -0.4
TMEM53-205ENST00000372244 TLX1NBP0CAT3 122 aa12.53□□□□□ -0.4
TMEM53-205ENST00000372244 SLC7A5P1Q8MH63 180 aa12.53□□□□□ -0.4
TMEM53-205ENST00000372244 A0A1W2PNN7 141 aa12.53□□□□□ -0.4
TMEM53-205ENST00000372244 GEMIN7Q9H840 131 aaKnown RBP12.53□□□□□ -0.4
TMEM53-205ENST00000372244 TINCRA0A1B0GVN0 87 aa12.52□□□□□ -0.41
TMEM53-205ENST00000372244 C2orf82Q6UX34 121 aa12.52□□□□□ -0.41
TMEM53-205ENST00000372244 PKHD1L1Q86WI1 4243 aa12.51□□□□□ -0.41
TMEM53-205ENST00000372244 TRBV30A0A0K0K1B3 111 aa12.51□□□□□ -0.41
TMEM53-205ENST00000372244 RPL18AQ02543 176 aaKnown RBP12.51□□□□□ -0.41
TMEM53-205ENST00000372244 IGLV5-45A0A087WSX0 123 aa12.5□□□□□ -0.41
TMEM53-205ENST00000372244 PMVKQ15126 192 aa12.5□□□□□ -0.41
TMEM53-205ENST00000372244 Q6ZRP5 223 aa12.5□□□□□ -0.41
TMEM53-205ENST00000372244 Q8IZM0 81 aa12.5□□□□□ -0.41
TMEM53-205ENST00000372244 C9orf116Q5BN46 136 aaPredicted RBP12.49□□□□□ -0.41
TMEM53-205ENST00000372244 CBLN2Q8IUK8 224 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms