RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 C5orf38Q86SI9 138 aa11.86□□□□□ -0.51
TMEM53-201ENST00000372235 PYGO1Q9Y3Y4 419 aa11.86□□□□□ -0.51
TMEM53-201ENST00000372235 SPAG11BQ08648 103 aa11.85□□□□□ -0.51
TMEM53-201ENST00000372235 IFITM10A6NMD0 228 aa11.84□□□□□ -0.51
TMEM53-201ENST00000372235 GAGE2BQ13066 116 aa11.84□□□□□ -0.51
TMEM53-201ENST00000372235 Q6ZRP5 223 aa11.84□□□□□ -0.51
TMEM53-201ENST00000372235 MAP1LC3AQ9H492 121 aa11.84□□□□□ -0.51
TMEM53-201ENST00000372235 TGIF2-C20orf24A0A0A6YYL0 155 aa11.83□□□□□ -0.52
TMEM53-201ENST00000372235 K7EMI3 77 aa11.83□□□□□ -0.52
TMEM53-201ENST00000372235 IMMP2LQ96T52 175 aa11.83□□□□□ -0.52
TMEM53-201ENST00000372235 PLA2G2DQ9UNK4 145 aa11.83□□□□□ -0.52
TMEM53-201ENST00000372235 IGHV3OR16-9A0A0B4J2B5 98 aa11.82□□□□□ -0.52
TMEM53-201ENST00000372235 G0S2P27469 103 aa11.82□□□□□ -0.52
TMEM53-201ENST00000372235 SPINK6Q6UWN8 80 aa11.82□□□□□ -0.52
TMEM53-201ENST00000372235 MRPL35Q9NZE8 188 aaKnown RBP11.82□□□□□ -0.52
TMEM53-201ENST00000372235 NDUFA1O15239 70 aa11.81□□□□□ -0.52
TMEM53-201ENST00000372235 NPSP0C0P6 89 aa11.81□□□□□ -0.52
TMEM53-201ENST00000372235 ORAOV1Q8WV07 137 aa11.81□□□□□ -0.52
TMEM53-201ENST00000372235 TMEM141Q96I45 108 aa11.81□□□□□ -0.52
TMEM53-201ENST00000372235 LRP1Q07954 4544 aaKnown RBP11.81□□□□□ -0.52
TMEM53-201ENST00000372235 ORMDL2Q53FV1 153 aa11.8□□□□□ -0.52
TMEM53-201ENST00000372235 REG3GQ6UW15 175 aa11.8□□□□□ -0.52
TMEM53-201ENST00000372235 Q6ZN92 141 aa11.8□□□□□ -0.52
TMEM53-201ENST00000372235 C2orf88Q9BSF0 95 aa11.8□□□□□ -0.52
TMEM53-201ENST00000372235 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.79□□□□□ -0.52
TMEM53-201ENST00000372235 RPL18AQ02543 176 aaKnown RBP11.79□□□□□ -0.52
TMEM53-201ENST00000372235 TEX43Q6ZNM6 134 aa11.79□□□□□ -0.52
TMEM53-201ENST00000372235 CYSLTR1Q9Y271 337 aa11.79□□□□□ -0.52
TMEM53-201ENST00000372235 FAT3Q8TDW7 4589 aa11.78□□□□□ -0.52
TMEM53-201ENST00000372235 Q8N8P6 123 aa11.78□□□□□ -0.52
TMEM53-201ENST00000372235 FAM104AQ969W3 186 aa11.78□□□□□ -0.52
TMEM53-201ENST00000372235 PKHD1L1Q86WI1 4243 aa11.78□□□□□ -0.52
TMEM53-201ENST00000372235 A0A087WZ39 114 aa11.77□□□□□ -0.53
TMEM53-201ENST00000372235 MT1HL1P0DM35 61 aa11.77□□□□□ -0.53
TMEM53-201ENST00000372235 CLLU1Q5K131 121 aa11.77□□□□□ -0.53
TMEM53-201ENST00000372235 PAPPA-AS1Q5QFB9 102 aa11.77□□□□□ -0.53
TMEM53-201ENST00000372235 LINC01561Q8N1V8 128 aa11.77□□□□□ -0.53
TMEM53-201ENST00000372235 LINC01600Q96MT4 127 aa11.77□□□□□ -0.53
TMEM53-201ENST00000372235 OPRPNQ99935 248 aaPredicted RBP11.77□□□□□ -0.53
TMEM53-201ENST00000372235 NXT2Q9NPJ8 142 aaKnown RBP11.77□□□□□ -0.53
TMEM53-201ENST00000372235 IGLV4-3A0A075B6K6 122 aa11.76□□□□□ -0.53
TMEM53-201ENST00000372235 LOC389332A0A1B0GUA5 103 aa11.76□□□□□ -0.53
TMEM53-201ENST00000372235 UQCC3Q6UW78 93 aa11.76□□□□□ -0.53
TMEM53-201ENST00000372235 CTDSP1Q9GZU7 261 aa11.76□□□□□ -0.53
TMEM53-201ENST00000372235 TLX1NBP0CAT3 122 aa11.75□□□□□ -0.53
TMEM53-201ENST00000372235 C9orf116Q5BN46 136 aaPredicted RBP11.75□□□□□ -0.53
TMEM53-201ENST00000372235 C2orf66Q6UXQ4 117 aa11.75□□□□□ -0.53
TMEM53-201ENST00000372235 SEC11AP67812 179 aa11.74□□□□□ -0.53
TMEM53-201ENST00000372235 LINC00242Q5T6M2 205 aa11.74□□□□□ -0.53
TMEM53-201ENST00000372235 VCX2Q9H322 139 aa11.74□□□□□ -0.53
TMEM53-201ENST00000372235 TRAV9-1A0A075B6T8 112 aa11.73□□□□□ -0.53
TMEM53-201ENST00000372235 TRBV30A0A0K0K1B3 111 aa11.72□□□□□ -0.53
TMEM53-201ENST00000372235 A0A1W2PNN7 141 aa11.72□□□□□ -0.53
TMEM53-201ENST00000372235 MT-ND6P03923 174 aa11.72□□□□□ -0.53
TMEM53-201ENST00000372235 LINC01549A6NIU2 74 aa11.71□□□□□ -0.53
TMEM53-201ENST00000372235 UBE2D1P51668 147 aa11.71□□□□□ -0.53
TMEM53-201ENST00000372235 SRSF9Q13242 221 aaKnown RBP eCLIP11.71□□□□□ -0.53
TMEM53-201ENST00000372235 PACRGQ96M98 296 aaPredicted RBP11.71□□□□□ -0.53
TMEM53-201ENST00000372235 A0A0J9YXV3 536 aa11.7□□□□□ -0.54
TMEM53-201ENST00000372235 AMELXQ99217 191 aa11.7□□□□□ -0.54
TMEM53-201ENST00000372235 PRSS2P07478 247 aa11.69□□□□□ -0.54
TMEM53-201ENST00000372235 S100PP25815 95 aa11.69□□□□□ -0.54
TMEM53-201ENST00000372235 UNQ6190/PRO20217Q6UXQ8 127 aa11.69□□□□□ -0.54
TMEM53-201ENST00000372235 COX19Q49B96 90 aa11.68□□□□□ -0.54
TMEM53-201ENST00000372235 FAM19A3Q7Z5A8 133 aa11.68□□□□□ -0.54
TMEM53-201ENST00000372235 C6orf48Q9UBA6 75 aa11.68□□□□□ -0.54
TMEM53-201ENST00000372235 TMEM218A2RU14 115 aa11.67□□□□□ -0.54
TMEM53-201ENST00000372235 IGIPA6NJ69 53 aa11.67□□□□□ -0.54
TMEM53-201ENST00000372235 HERVK_113P63121 156 aa11.67□□□□□ -0.54
TMEM53-201ENST00000372235 KIAA0087Q14695 138 aa11.67□□□□□ -0.54
TMEM53-201ENST00000372235 TIMM17AQ99595 171 aa11.67□□□□□ -0.54
TMEM53-201ENST00000372235 PSORS1C2Q9UIG4 136 aa11.67□□□□□ -0.54
TMEM53-201ENST00000372235 NDUFC2-KCTD14E9PQ53 114 aa11.66□□□□□ -0.54
TMEM53-201ENST00000372235 CKS1BP61024 79 aa11.66□□□□□ -0.54
TMEM53-201ENST00000372235 C10orf25Q5T742 122 aa11.66□□□□□ -0.54
TMEM53-201ENST00000372235 C1orf137Q5JT78 98 aa11.65□□□□□ -0.54
TMEM53-201ENST00000372235 TOMM6Q96B49 74 aa11.65□□□□□ -0.54
TMEM53-201ENST00000372235 SEC11CQ9BY50 192 aa11.65□□□□□ -0.54
TMEM53-201ENST00000372235 HMCN2Q8NDA2 5059 aa11.65□□□□□ -0.54
TMEM53-201ENST00000372235 GAGE2EQ4V326 116 aa11.64□□□□□ -0.55
TMEM53-201ENST00000372235 C6orf226Q5I0X4 101 aa11.64□□□□□ -0.55
TMEM53-201ENST00000372235 PHF5AQ7RTV0 110 aaKnown RBP11.64□□□□□ -0.55
TMEM53-201ENST00000372235 Q8IZM0 81 aa11.64□□□□□ -0.55
TMEM53-201ENST00000372235 GNB1LQ9BYB4 327 aa11.64□□□□□ -0.55
TMEM53-201ENST00000372235 GEMIN7Q9H840 131 aaKnown RBP11.64□□□□□ -0.55
TMEM53-201ENST00000372235 GAGE2DQ9UEU5 116 aa11.64□□□□□ -0.55
TMEM53-201ENST00000372235 LINC00173Q6ZV60 143 aa11.63□□□□□ -0.55
TMEM53-201ENST00000372235 ERASQ7Z444 233 aa11.63□□□□□ -0.55
TMEM53-201ENST00000372235 DIRC1Q969H9 104 aa11.62□□□□□ -0.55
TMEM53-201ENST00000372235 ADCYAP1P18509 176 aa11.61□□□□□ -0.55
TMEM53-201ENST00000372235 CXCL5P42830 114 aa11.61□□□□□ -0.55
TMEM53-201ENST00000372235 KRTAP10-8P60410 259 aa11.61□□□□□ -0.55
TMEM53-201ENST00000372235 ALKBH7Q9BT30 221 aaPredicted RBP11.61□□□□□ -0.55
TMEM53-201ENST00000372235 C2orf82Q6UX34 121 aa11.6□□□□□ -0.55
TMEM53-201ENST00000372235 FAM19A5Q7Z5A7 132 aaPredicted RBP11.6□□□□□ -0.55
TMEM53-201ENST00000372235 SCGB3A1Q96QR1 104 aa11.6□□□□□ -0.55
TMEM53-201ENST00000372235 TOMM7Q9P0U1 55 aa11.6□□□□□ -0.55
TMEM53-201ENST00000372235 IGLV7-43P04211 117 aa11.59□□□□□ -0.55
TMEM53-201ENST00000372235 UBE2BP63146 152 aa11.59□□□□□ -0.55
TMEM53-201ENST00000372235 ODF1Q14990 250 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms