RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 INSP01308 110 aa7.36□□□□□ -1.23
COL5A1-202ENST00000371820 CFC1BP0CG36 223 aa7.36□□□□□ -1.23
COL5A1-202ENST00000371820 CFC1P0CG37 223 aa7.36□□□□□ -1.23
COL5A1-202ENST00000371820 SPART-AS1P0CW21 52 aa7.36□□□□□ -1.23
COL5A1-202ENST00000371820 PSMB2P49721 201 aa7.36□□□□□ -1.23
COL5A1-202ENST00000371820 TIRAPP58753 221 aa7.36□□□□□ -1.23
COL5A1-202ENST00000371820 DEFB1P60022 68 aa7.36□□□□□ -1.23
COL5A1-202ENST00000371820 RPL39P62891 51 aaKnown RBP7.36□□□□□ -1.23
COL5A1-202ENST00000371820 FOXI1Q12951 378 aa7.36□□□□□ -1.23
COL5A1-202ENST00000371820 CFAP126Q5VTH2 177 aa7.36□□□□□ -1.23
COL5A1-202ENST00000371820 ZNRF2Q8NHG8 242 aa7.36□□□□□ -1.23
COL5A1-202ENST00000371820 LINC01600Q96MT4 127 aa7.36□□□□□ -1.23
COL5A1-202ENST00000371820 PRO0461Q9UI25 63 aa7.36□□□□□ -1.23
COL5A1-202ENST00000371820 TRAV12-2A0A075B6T6 113 aa7.35□□□□□ -1.23
COL5A1-202ENST00000371820 IGHV1-58A0A0C4DH39 117 aa7.35□□□□□ -1.23
COL5A1-202ENST00000371820 TSPAN13O95857 204 aa7.35□□□□□ -1.23
COL5A1-202ENST00000371820 IGHV3-53P01767 116 aa7.35□□□□□ -1.23
COL5A1-202ENST00000371820 ZNF22P17026 224 aaPredicted RBP7.35□□□□□ -1.23
COL5A1-202ENST00000371820 C21orf62-AS1Q17RA5 79 aa7.35□□□□□ -1.23
COL5A1-202ENST00000371820 ETDBQ3ZM63 59 aa7.35□□□□□ -1.23
COL5A1-202ENST00000371820 Q6ZTC4 211 aa7.35□□□□□ -1.23
COL5A1-202ENST00000371820 SPANXDQ9BXN6 97 aa7.35□□□□□ -1.23
COL5A1-202ENST00000371820 SPANXCQ9NY87 97 aa7.35□□□□□ -1.23
COL5A1-202ENST00000371820 MUC4Q99102 2169 aa7.35□□□□□ -1.23
COL5A1-202ENST00000371820 VPS13DQ5THJ4 4388 aa7.34□□□□□ -1.23
COL5A1-202ENST00000371820 DEFB131BA0A096LNP1 70 aa7.34□□□□□ -1.23
COL5A1-202ENST00000371820 TRBV10-1A0A0K0K1A3 114 aa7.34□□□□□ -1.23
COL5A1-202ENST00000371820 RS1O15537 224 aa7.34□□□□□ -1.23
COL5A1-202ENST00000371820 ATXN8Q156A1 80 aa7.34□□□□□ -1.23
COL5A1-202ENST00000371820 TEN1Q86WV5 123 aa7.34□□□□□ -1.23
COL5A1-202ENST00000371820 LINC01587Q99440 93 aa7.34□□□□□ -1.23
COL5A1-202ENST00000371820 DNAH6Q9C0G6 4158 aa7.33□□□□□ -1.24
COL5A1-202ENST00000371820 TRBV30A0A0K0K1B3 111 aa7.33□□□□□ -1.24
COL5A1-202ENST00000371820 EMP1P54849 157 aa7.33□□□□□ -1.24
COL5A1-202ENST00000371820 DGAT2L7PQ6IED9 249 aa7.33□□□□□ -1.24
COL5A1-202ENST00000371820 C1orf158Q8N1D5 194 aa7.33□□□□□ -1.24
COL5A1-202ENST00000371820 KRTAP17-1Q9BYP8 105 aa7.33□□□□□ -1.24
COL5A1-202ENST00000371820 PPDPFQ9H3Y8 114 aa7.33□□□□□ -1.24
COL5A1-202ENST00000371820 GEMIN7Q9H840 131 aaKnown RBP7.33□□□□□ -1.24
COL5A1-202ENST00000371820 CELA1Q9UNI1 258 aa7.33□□□□□ -1.24
COL5A1-202ENST00000371820 CSDC2Q9Y534 153 aaKnown RBP7.33□□□□□ -1.24
COL5A1-202ENST00000371820 HECTD4Q9Y4D8 3996 aa7.33□□□□□ -1.24
COL5A1-202ENST00000371820 A0A1B0GV72 72 aa7.32□□□□□ -1.24
COL5A1-202ENST00000371820 IGHV3-33P01772 117 aa7.32□□□□□ -1.24
COL5A1-202ENST00000371820 APLNQ9ULZ1 77 aa7.32□□□□□ -1.24
COL5A1-202ENST00000371820 A0A0J9YXV3 536 aa7.31□□□□□ -1.24
COL5A1-202ENST00000371820 A4D1N5 150 aa7.31□□□□□ -1.24
COL5A1-202ENST00000371820 H7C423 109 aa7.31□□□□□ -1.24
COL5A1-202ENST00000371820 IGHV3-30-3P0DP02 117 aa7.31□□□□□ -1.24
COL5A1-202ENST00000371820 AZU1P20160 251 aa7.31□□□□□ -1.24
COL5A1-202ENST00000371820 HERVK_113P63121 156 aa7.31□□□□□ -1.24
COL5A1-202ENST00000371820 DAZ2Q13117 558 aaKnown RBP7.31□□□□□ -1.24
COL5A1-202ENST00000371820 FAM222AQ5U5X8 452 aa7.31□□□□□ -1.24
COL5A1-202ENST00000371820 FAM19A3Q7Z5A8 133 aa7.31□□□□□ -1.24
COL5A1-202ENST00000371820 DAZ4Q86SG3 579 aaKnown RBP7.31□□□□□ -1.24
COL5A1-202ENST00000371820 MUSTN1Q8IVN3 82 aa7.31□□□□□ -1.24
COL5A1-202ENST00000371820 TMEM263Q8WUH6 116 aaKnown RBP7.31□□□□□ -1.24
COL5A1-202ENST00000371820 DAZ3Q9NR90 486 aaKnown RBP7.31□□□□□ -1.24
COL5A1-202ENST00000371820 LYRM9A8MSI8 78 aa7.3□□□□□ -1.24
COL5A1-202ENST00000371820 DAD1P61803 113 aa7.3□□□□□ -1.24
COL5A1-202ENST00000371820 RPL36AP83881 106 aaKnown RBP7.3□□□□□ -1.24
COL5A1-202ENST00000371820 SH2D6Q7Z4S9 175 aa7.3□□□□□ -1.24
COL5A1-202ENST00000371820 RPL36ALQ969Q0 106 aaKnown RBP7.3□□□□□ -1.24
COL5A1-202ENST00000371820 VSIG2Q96IQ7 327 aa7.3□□□□□ -1.24
COL5A1-202ENST00000371820 UBE2D4Q9Y2X8 147 aa7.3□□□□□ -1.24
COL5A1-202ENST00000371820 TCL1BO95988 128 aa7.29□□□□□ -1.24
COL5A1-202ENST00000371820 Q1RN00 199 aa7.29□□□□□ -1.24
COL5A1-202ENST00000371820 C16orf74Q96GX8 76 aa7.29□□□□□ -1.24
COL5A1-202ENST00000371820 NDUFA12Q9UI09 145 aa7.29□□□□□ -1.24
COL5A1-202ENST00000371820 IGLV5-45A0A087WSX0 123 aa7.28□□□□□ -1.24
COL5A1-202ENST00000371820 TRAV4A0A0B4J268 109 aa7.28□□□□□ -1.24
COL5A1-202ENST00000371820 SLC25A20O43772 301 aa7.28□□□□□ -1.24
COL5A1-202ENST00000371820 PRSS2P07478 247 aa7.28□□□□□ -1.24
COL5A1-202ENST00000371820 HERV-K104P63124 156 aa7.28□□□□□ -1.24
COL5A1-202ENST00000371820 MIAQ16674 131 aa7.28□□□□□ -1.24
COL5A1-202ENST00000371820 CHCHD7Q9BUK0 85 aa7.28□□□□□ -1.24
COL5A1-202ENST00000371820 KIAA1109Q2LD37 5005 aa7.27□□□□□ -1.25
COL5A1-202ENST00000371820 TRBV10-2A0A0K0K1G8 114 aa7.27□□□□□ -1.25
COL5A1-202ENST00000371820 H3BT86 120 aa7.27□□□□□ -1.25
COL5A1-202ENST00000371820 HTN1P15515 57 aa7.27□□□□□ -1.25
COL5A1-202ENST00000371820 TSPEAR-AS2P59090 65 aa7.27□□□□□ -1.25
COL5A1-202ENST00000371820 MRPL23Q16540 153 aaKnown RBP7.27□□□□□ -1.25
COL5A1-202ENST00000371820 ANKRD29Q8N6D5 301 aa7.27□□□□□ -1.25
COL5A1-202ENST00000371820 C11orf72Q8NBR9 251 aa7.27□□□□□ -1.25
COL5A1-202ENST00000371820 TMEM101Q96IK0 257 aa7.27□□□□□ -1.25
COL5A1-202ENST00000371820 GTSF1LQ9H1H1 148 aa7.27□□□□□ -1.25
COL5A1-202ENST00000371820 PCLOQ9Y6V0 5065 aa7.26□□□□□ -1.25
COL5A1-202ENST00000371820 NDUFA1O15239 70 aa7.26□□□□□ -1.25
COL5A1-202ENST00000371820 HTN3P15516 51 aa7.26□□□□□ -1.25
COL5A1-202ENST00000371820 SFTA2Q6UW10 78 aa7.26□□□□□ -1.25
COL5A1-202ENST00000371820 UBE2DNLQ8IWF7 75 aa7.26□□□□□ -1.25
COL5A1-202ENST00000371820 C15orf53Q8NAA6 179 aa7.26□□□□□ -1.25
COL5A1-202ENST00000371820 RPL13AP40429 203 aaKnown RBP7.25□□□□□ -1.25
COL5A1-202ENST00000371820 SMCPP49901 116 aaPredicted RBP7.25□□□□□ -1.25
COL5A1-202ENST00000371820 LINC01620Q4KN68 170 aa7.25□□□□□ -1.25
COL5A1-202ENST00000371820 OPRPNQ99935 248 aaPredicted RBP7.25□□□□□ -1.25
COL5A1-202ENST00000371820 FAT2Q9NYQ8 4349 aa7.24□□□□□ -1.25
COL5A1-202ENST00000371820 ATP5G1P05496 136 aa7.24□□□□□ -1.25
COL5A1-202ENST00000371820 DEFB130BP0DP73 79 aa7.24□□□□□ -1.25
COL5A1-202ENST00000371820 DEFB130AP0DP74 79 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms