RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 ITPR1Q14643 2758 aa6.87□□□□□ -1.31
LRRC40-201ENST00000370952 SPTBN4Q9H254 2564 aa6.87□□□□□ -1.31
LRRC40-201ENST00000370952 DPH3Q96FX2 82 aa6.87□□□□□ -1.31
LRRC40-201ENST00000370952 CDC42SE2Q9NRR3 84 aa6.87□□□□□ -1.31
LRRC40-201ENST00000370952 XCL2Q9UBD3 114 aa6.87□□□□□ -1.31
LRRC40-201ENST00000370952 TLN2Q9Y4G6 2542 aa6.87□□□□□ -1.31
LRRC40-201ENST00000370952 TRGV1A0A0A0MS02 117 aa6.87□□□□□ -1.31
LRRC40-201ENST00000370952 USP17L23D6RBM5 183 aa6.87□□□□□ -1.31
LRRC40-201ENST00000370952 LINC00158P58513 81 aa6.87□□□□□ -1.31
LRRC40-201ENST00000370952 DEFB112Q30KQ8 113 aa6.87□□□□□ -1.31
LRRC40-201ENST00000370952 SERP2Q8N6R1 65 aa6.87□□□□□ -1.31
LRRC40-201ENST00000370952 UBE2E2Q96LR5 201 aa6.87□□□□□ -1.31
LRRC40-201ENST00000370952 POLQO75417 2590 aa6.86□□□□□ -1.31
LRRC40-201ENST00000370952 UTP20O75691 2785 aaKnown RBP6.86□□□□□ -1.31
LRRC40-201ENST00000370952 OR13C6PQ8NH95 151 aa6.86□□□□□ -1.31
LRRC40-201ENST00000370952 Q6JHZ5 121 aa6.86□□□□□ -1.31
LRRC40-201ENST00000370952 WFDC9Q8NEX5 89 aa6.86□□□□□ -1.31
LRRC40-201ENST00000370952 UPK3BQ9BT76 320 aa6.86□□□□□ -1.31
LRRC40-201ENST00000370952 CENPEQ02224 2701 aa6.85□□□□□ -1.31
LRRC40-201ENST00000370952 MSMBP08118 114 aa6.85□□□□□ -1.31
LRRC40-201ENST00000370952 PFN2P35080 140 aa6.85□□□□□ -1.31
LRRC40-201ENST00000370952 HILS1P60008 231 aa6.85□□□□□ -1.31
LRRC40-201ENST00000370952 C10orf105Q8TEF2 133 aa6.85□□□□□ -1.31
LRRC40-201ENST00000370952 PF4P02776 101 aa6.85□□□□□ -1.31
LRRC40-201ENST00000370952 CCL18P55774 89 aa6.85□□□□□ -1.31
LRRC40-201ENST00000370952 RPS28P62857 69 aaKnown RBP6.85□□□□□ -1.31
LRRC40-201ENST00000370952 RPL36AP83881 106 aaKnown RBP6.85□□□□□ -1.31
LRRC40-201ENST00000370952 RPL36ALQ969Q0 106 aaKnown RBP6.85□□□□□ -1.31
LRRC40-201ENST00000370952 FAM19A3Q7Z5A8 133 aa6.84□□□□□ -1.31
LRRC40-201ENST00000370952 COX7B2Q8TF08 81 aa6.84□□□□□ -1.31
LRRC40-201ENST00000370952 MAP6D1Q9H9H5 199 aa6.84□□□□□ -1.31
LRRC40-201ENST00000370952 SETD2Q9BYW2 2564 aaPredicted RBP6.84□□□□□ -1.31
LRRC40-201ENST00000370952 FBN2P35556 2912 aa6.84□□□□□ -1.31
LRRC40-201ENST00000370952 TMEM258P61165 79 aa6.84□□□□□ -1.31
LRRC40-201ENST00000370952 C4orf26Q17RF5 130 aa6.84□□□□□ -1.31
LRRC40-201ENST00000370952 AKAP9Q99996 3911 aa6.84□□□□□ -1.31
LRRC40-201ENST00000370952 INSP01308 110 aa6.83□□□□□ -1.32
LRRC40-201ENST00000370952 Q6ZTI0 123 aa6.83□□□□□ -1.32
LRRC40-201ENST00000370952 C11orf68Q9H3H3 251 aaKnown RBP6.83□□□□□ -1.32
LRRC40-201ENST00000370952 A8MTW9 85 aa6.83□□□□□ -1.32
LRRC40-201ENST00000370952 UBE2L6O14933 153 aa6.83□□□□□ -1.32
LRRC40-201ENST00000370952 PAX4O43316 350 aa6.83□□□□□ -1.32
LRRC40-201ENST00000370952 FLNCQ14315 2725 aa6.83□□□□□ -1.32
LRRC40-201ENST00000370952 K7EQD1 137 aa6.83□□□□□ -1.32
LRRC40-201ENST00000370952 OBSCN-AS1Q96MR7 158 aa6.82□□□□□ -1.32
LRRC40-201ENST00000370952 OVOL2Q9BRP0 275 aa6.82□□□□□ -1.32
LRRC40-201ENST00000370952 NIPBLQ6KC79 2804 aaeCLIP6.82□□□□□ -1.32
LRRC40-201ENST00000370952 LOC100131303A0A0U1RQF7 123 aa6.82□□□□□ -1.32
LRRC40-201ENST00000370952 H0YGX0 51 aa6.82□□□□□ -1.32
LRRC40-201ENST00000370952 FHL2Q14192 279 aa6.82□□□□□ -1.32
LRRC40-201ENST00000370952 CCL19Q99731 98 aa6.82□□□□□ -1.32
LRRC40-201ENST00000370952 PTPN13Q12923 2485 aa6.81□□□□□ -1.32
LRRC40-201ENST00000370952 ANKRD17O75179 2603 aaKnown RBP6.81□□□□□ -1.32
LRRC40-201ENST00000370952 TRAV23DV6A0A075B6W5 121 aa6.81□□□□□ -1.32
LRRC40-201ENST00000370952 SS18Q15532 418 aa6.81□□□□□ -1.32
LRRC40-201ENST00000370952 KHDC1LQ5JSQ8 128 aa6.81□□□□□ -1.32
LRRC40-201ENST00000370952 HRCT1Q6UXD1 115 aa6.81□□□□□ -1.32
LRRC40-201ENST00000370952 MAPK1IP1LQ8NDC0 245 aa6.81□□□□□ -1.32
LRRC40-201ENST00000370952 TMEM243Q9BU79 118 aa6.81□□□□□ -1.32
LRRC40-201ENST00000370952 EPG5Q9HCE0 2579 aa6.8□□□□□ -1.32
LRRC40-201ENST00000370952 NBPF19A0A087WUL8 3843 aa6.8□□□□□ -1.32
LRRC40-201ENST00000370952 C1orf158Q8N1D5 194 aa6.8□□□□□ -1.32
LRRC40-201ENST00000370952 DYNLRB2Q8TF09 96 aa6.8□□□□□ -1.32
LRRC40-201ENST00000370952 GHRHP01286 108 aa6.8□□□□□ -1.32
LRRC40-201ENST00000370952 UCNP55089 124 aa6.8□□□□□ -1.32
LRRC40-201ENST00000370952 FAM19A1Q7Z5A9 133 aa6.8□□□□□ -1.32
LRRC40-201ENST00000370952 NBL1P41271 181 aa6.79□□□□□ -1.32
LRRC40-201ENST00000370952 SETXQ7Z333 2677 aaKnown RBP6.79□□□□□ -1.32
LRRC40-201ENST00000370952 IGLV4-60A0A075B6I1 120 aa6.79□□□□□ -1.32
LRRC40-201ENST00000370952 ORMDL1Q9P0S3 153 aa6.79□□□□□ -1.32
LRRC40-201ENST00000370952 FN1P02751 2386 aaKnown RBP6.79□□□□□ -1.32
LRRC40-201ENST00000370952 LRRK2Q5S007 2527 aa6.79□□□□□ -1.32
LRRC40-201ENST00000370952 TRBV10-1A0A0K0K1A3 114 aa6.78□□□□□ -1.32
LRRC40-201ENST00000370952 B4DSR2 109 aa6.78□□□□□ -1.32
LRRC40-201ENST00000370952 CCKP06307 115 aa6.78□□□□□ -1.32
LRRC40-201ENST00000370952 RNASE1P07998 156 aaKnown RBP6.78□□□□□ -1.32
LRRC40-201ENST00000370952 Q5XG85 94 aa6.78□□□□□ -1.32
LRRC40-201ENST00000370952 ENHOQ6UWT2 76 aa6.78□□□□□ -1.32
LRRC40-201ENST00000370952 ZNF702PQ9H963 129 aa6.78□□□□□ -1.32
LRRC40-201ENST00000370952 NOP10Q9NPE3 64 aaKnown RBP6.78□□□□□ -1.32
LRRC40-201ENST00000370952 TEX15Q9BXT5 2789 aa6.78□□□□□ -1.32
LRRC40-201ENST00000370952 PRR3P79522 188 aaKnown RBP6.78□□□□□ -1.32
LRRC40-201ENST00000370952 NF1P21359 2839 aa6.77□□□□□ -1.33
LRRC40-201ENST00000370952 C20orf197Q8N268 126 aa6.77□□□□□ -1.33
LRRC40-201ENST00000370952 ODF3L2Q3SX64 289 aa6.77□□□□□ -1.33
LRRC40-201ENST00000370952 SONP18583 2426 aaKnown RBP6.77□□□□□ -1.33
LRRC40-201ENST00000370952 IGHV3OR16-9A0A0B4J2B5 98 aa6.76□□□□□ -1.33
LRRC40-201ENST00000370952 TRBV6-4A0A1B0GX49 114 aa6.76□□□□□ -1.33
LRRC40-201ENST00000370952 GNLYP22749 145 aa6.76□□□□□ -1.33
LRRC40-201ENST00000370952 STHQ8IWL8 128 aa6.76□□□□□ -1.33
LRRC40-201ENST00000370952 IBA57-AS1B1ANH7 110 aa6.76□□□□□ -1.33
LRRC40-201ENST00000370952 DEFB114Q30KQ6 69 aa6.76□□□□□ -1.33
LRRC40-201ENST00000370952 IL17DQ8TAD2 202 aa6.76□□□□□ -1.33
LRRC40-201ENST00000370952 TRAV25A0A0B4J276 109 aa6.75□□□□□ -1.33
LRRC40-201ENST00000370952 PLA2G2AP14555 144 aa6.75□□□□□ -1.33
LRRC40-201ENST00000370952 NAV2Q8IVL1 2488 aa6.75□□□□□ -1.33
LRRC40-201ENST00000370952 CFAP46Q8IYW2 2715 aa6.75□□□□□ -1.33
LRRC40-201ENST00000370952 TRGV2A0A075B6R0 118 aa6.75□□□□□ -1.33
LRRC40-201ENST00000370952 C6orf226Q5I0X4 101 aa6.75□□□□□ -1.33
LRRC40-201ENST00000370952 CR1P17927 2039 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms