RNA–Protein interactions for RNA: ENST00000370367.3

KHDC3L-201, Transcript of KH domain containing 3 like, subcortical maternal complex member, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KHDC3L, Length 1,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC3L-201ENST00000370367 C5orf38Q86SI9 138 aa13.17□□□□□ -0.3
KHDC3L-201ENST00000370367 STPG4Q8N801 248 aa13.17□□□□□ -0.3
KHDC3L-201ENST00000370367 OR10D4PQ8NGN7 298 aa13.17□□□□□ -0.3
KHDC3L-201ENST00000370367 CTDSP1Q9GZU7 261 aa13.17□□□□□ -0.3
KHDC3L-201ENST00000370367 IGHV3OR16-9A0A0B4J2B5 98 aa13.16□□□□□ -0.3
KHDC3L-201ENST00000370367 IFITM10A6NMD0 228 aa13.16□□□□□ -0.3
KHDC3L-201ENST00000370367 K7EMI3 77 aa13.16□□□□□ -0.3
KHDC3L-201ENST00000370367 ADCYAP1P18509 176 aa13.16□□□□□ -0.3
KHDC3L-201ENST00000370367 F8WDY8 70 aa13.15□□□□□ -0.3
KHDC3L-201ENST00000370367 HNRNPA3P51991 378 aaKnown RBP13.15□□□□□ -0.3
KHDC3L-201ENST00000370367 Q8N8P6 123 aa13.15□□□□□ -0.3
KHDC3L-201ENST00000370367 CAMK2N2Q96S95 79 aa13.15□□□□□ -0.3
KHDC3L-201ENST00000370367 OPRPNQ99935 248 aaPredicted RBP13.15□□□□□ -0.3
KHDC3L-201ENST00000370367 TRAV9-1A0A075B6T8 112 aa13.14□□□□□ -0.31
KHDC3L-201ENST00000370367 Q6ZRU5 148 aa13.14□□□□□ -0.31
KHDC3L-201ENST00000370367 LOC107984640A0A0U1RRK4 108 aa13.13□□□□□ -0.31
KHDC3L-201ENST00000370367 LOC389332A0A1B0GUA5 103 aa13.13□□□□□ -0.31
KHDC3L-201ENST00000370367 SPAG11BQ08648 103 aa13.13□□□□□ -0.31
KHDC3L-201ENST00000370367 IGLV4-3A0A075B6K6 122 aa13.12□□□□□ -0.31
KHDC3L-201ENST00000370367 NPSP0C0P6 89 aa13.12□□□□□ -0.31
KHDC3L-201ENST00000370367 PTTG1IPP53801 180 aa13.12□□□□□ -0.31
KHDC3L-201ENST00000370367 RNF151Q2KHN1 245 aa13.12□□□□□ -0.31
KHDC3L-201ENST00000370367 ORMDL2Q53FV1 153 aa13.12□□□□□ -0.31
KHDC3L-201ENST00000370367 TMEM141Q96I45 108 aa13.12□□□□□ -0.31
KHDC3L-201ENST00000370367 SEC11CQ9BY50 192 aa13.12□□□□□ -0.31
KHDC3L-201ENST00000370367 CYSLTR1Q9Y271 337 aa13.12□□□□□ -0.31
KHDC3L-201ENST00000370367 NXT2Q9NPJ8 142 aaKnown RBP13.11□□□□□ -0.31
KHDC3L-201ENST00000370367 TGIF2-C20orf24A0A0A6YYL0 155 aa13.1□□□□□ -0.31
KHDC3L-201ENST00000370367 C2orf66Q6UXQ4 117 aa13.1□□□□□ -0.31
KHDC3L-201ENST00000370367 TEX43Q6ZNM6 134 aa13.09□□□□□ -0.31
KHDC3L-201ENST00000370367 ORAOV1Q8WV07 137 aa13.09□□□□□ -0.31
KHDC3L-201ENST00000370367 MRPL35Q9NZE8 188 aaKnown RBP13.09□□□□□ -0.31
KHDC3L-201ENST00000370367 A0A087WZ39 114 aa13.08□□□□□ -0.32
KHDC3L-201ENST00000370367 G0S2P27469 103 aa13.08□□□□□ -0.32
KHDC3L-201ENST00000370367 LINC00242Q5T6M2 205 aa13.08□□□□□ -0.32
KHDC3L-201ENST00000370367 Q6ZN92 141 aa13.08□□□□□ -0.32
KHDC3L-201ENST00000370367 C2orf88Q9BSF0 95 aa13.08□□□□□ -0.32
KHDC3L-201ENST00000370367 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.07□□□□□ -0.32
KHDC3L-201ENST00000370367 PRR3P79522 188 aaKnown RBP13.07□□□□□ -0.32
KHDC3L-201ENST00000370367 NDUFA1O15239 70 aa13.06□□□□□ -0.32
KHDC3L-201ENST00000370367 S100PP25815 95 aa13.06□□□□□ -0.32
KHDC3L-201ENST00000370367 GAGE2BQ13066 116 aa13.06□□□□□ -0.32
KHDC3L-201ENST00000370367 LINC01561Q8N1V8 128 aa13.06□□□□□ -0.32
KHDC3L-201ENST00000370367 UBE2D1P51668 147 aa13.05□□□□□ -0.32
KHDC3L-201ENST00000370367 COMMD7Q86VX2 200 aa13.05□□□□□ -0.32
KHDC3L-201ENST00000370367 AMELXQ99217 191 aa13.05□□□□□ -0.32
KHDC3L-201ENST00000370367 IGIPA6NJ69 53 aa13.04□□□□□ -0.32
KHDC3L-201ENST00000370367 COX19Q49B96 90 aa13.04□□□□□ -0.32
KHDC3L-201ENST00000370367 PAPPA-AS1Q5QFB9 102 aa13.04□□□□□ -0.32
KHDC3L-201ENST00000370367 GNB1LQ9BYB4 327 aa13.04□□□□□ -0.32
KHDC3L-201ENST00000370367 VCX2Q9H322 139 aa13.04□□□□□ -0.32
KHDC3L-201ENST00000370367 C10orf91Q5T1B1 145 aa13.03□□□□□ -0.32
KHDC3L-201ENST00000370367 SERTAD4-AS1Q5TG53 156 aa13.03□□□□□ -0.32
KHDC3L-201ENST00000370367 RPL18AQ02543 176 aaKnown RBP13.02□□□□□ -0.33
KHDC3L-201ENST00000370367 LINC00173Q6ZV60 143 aa13.02□□□□□ -0.33
KHDC3L-201ENST00000370367 TIMM17AQ99595 171 aa13.02□□□□□ -0.33
KHDC3L-201ENST00000370367 TLX1NBP0CAT3 122 aa13.01□□□□□ -0.33
KHDC3L-201ENST00000370367 RHEBQ15382 184 aa13.01□□□□□ -0.33
KHDC3L-201ENST00000370367 FAM19A3Q7Z5A8 133 aa13.01□□□□□ -0.33
KHDC3L-201ENST00000370367 CARHSP1Q9Y2V2 147 aaKnown RBP13.01□□□□□ -0.33
KHDC3L-201ENST00000370367 LINC01549A6NIU2 74 aa13□□□□□ -0.33
KHDC3L-201ENST00000370367 KIAA0087Q14695 138 aa13□□□□□ -0.33
KHDC3L-201ENST00000370367 KIAA1644Q3SXP7 199 aa13□□□□□ -0.33
KHDC3L-201ENST00000370367 Q6ZRP5 223 aa13□□□□□ -0.33
KHDC3L-201ENST00000370367 TOMM6Q96B49 74 aa13□□□□□ -0.33
KHDC3L-201ENST00000370367 HMCN2Q8NDA2 5059 aa13□□□□□ -0.33
KHDC3L-201ENST00000370367 A0A0J9YXV3 536 aa12.99□□□□□ -0.33
KHDC3L-201ENST00000370367 A0A1W2PNN7 141 aa12.99□□□□□ -0.33
KHDC3L-201ENST00000370367 MT-ND6P03923 174 aa12.99□□□□□ -0.33
KHDC3L-201ENST00000370367 SEC11AP67812 179 aa12.99□□□□□ -0.33
KHDC3L-201ENST00000370367 C9orf116Q5BN46 136 aaPredicted RBP12.99□□□□□ -0.33
KHDC3L-201ENST00000370367 C10orf25Q5T742 122 aa12.98□□□□□ -0.33
KHDC3L-201ENST00000370367 UNQ6190/PRO20217Q6UXQ8 127 aa12.98□□□□□ -0.33
KHDC3L-201ENST00000370367 C6orf48Q9UBA6 75 aa12.98□□□□□ -0.33
KHDC3L-201ENST00000370367 TRBV30A0A0K0K1B3 111 aa12.97□□□□□ -0.33
KHDC3L-201ENST00000370367 LINC01546A6NGU7 62 aa12.97□□□□□ -0.33
KHDC3L-201ENST00000370367 MT1HL1P0DM35 61 aa12.96□□□□□ -0.33
KHDC3L-201ENST00000370367 HERVK_113P63121 156 aa12.96□□□□□ -0.33
KHDC3L-201ENST00000370367 ZC2HC1BQ5TFG8 222 aa12.96□□□□□ -0.33
KHDC3L-201ENST00000370367 SPINK6Q6UWN8 80 aa12.96□□□□□ -0.33
KHDC3L-201ENST00000370367 ERASQ7Z444 233 aa12.96□□□□□ -0.33
KHDC3L-201ENST00000370367 ALKBH7Q9BT30 221 aaPredicted RBP12.96□□□□□ -0.33
KHDC3L-201ENST00000370367 RPS10P5Q9NQ39 176 aa12.94□□□□□ -0.34
KHDC3L-201ENST00000370367 PACRGQ96M98 296 aaPredicted RBP12.93□□□□□ -0.34
KHDC3L-201ENST00000370367 SCGB3A1Q96QR1 104 aa12.93□□□□□ -0.34
KHDC3L-201ENST00000370367 PRSS2P07478 247 aa12.92□□□□□ -0.34
KHDC3L-201ENST00000370367 Q8IZM0 81 aa12.92□□□□□ -0.34
KHDC3L-201ENST00000370367 MRPL18Q9H0U6 180 aaKnown RBP12.92□□□□□ -0.34
KHDC3L-201ENST00000370367 NDUFC2-KCTD14E9PQ53 114 aa12.91□□□□□ -0.34
KHDC3L-201ENST00000370367 FABP9Q0Z7S8 132 aa12.91□□□□□ -0.34
KHDC3L-201ENST00000370367 SRSF9Q13242 221 aaKnown RBP eCLIP12.91□□□□□ -0.34
KHDC3L-201ENST00000370367 GEMIN7Q9H840 131 aaKnown RBP12.91□□□□□ -0.34
KHDC3L-201ENST00000370367 C2orf82Q6UX34 121 aa12.9□□□□□ -0.34
KHDC3L-201ENST00000370367 LINC01600Q96MT4 127 aa12.9□□□□□ -0.34
KHDC3L-201ENST00000370367 CKS1BP61024 79 aa12.89□□□□□ -0.35
KHDC3L-201ENST00000370367 REG3GQ6UW15 175 aa12.89□□□□□ -0.35
KHDC3L-201ENST00000370367 FA2HQ7L5A8 372 aa12.89□□□□□ -0.35
KHDC3L-201ENST00000370367 CDKN2A-AS1Q9UH64 79 aa12.89□□□□□ -0.35
KHDC3L-201ENST00000370367 TNXBP22105 4242 aa12.89□□□□□ -0.35
KHDC3L-201ENST00000370367 GAGE2EQ4V326 116 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms