RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 UBE2D3P61077 147 aa8.92□□□□□ -0.98
PTPRK-203ENST00000368207 UBE2D2P62837 147 aa8.92□□□□□ -0.98
PTPRK-203ENST00000368207 IGKV3D-7A0A0C4DH55 119 aa8.92□□□□□ -0.98
PTPRK-203ENST00000368207 IGIPA6NJ69 53 aa8.92□□□□□ -0.98
PTPRK-203ENST00000368207 H3BT86 120 aa8.92□□□□□ -0.98
PTPRK-203ENST00000368207 BPTFQ12830 3046 aa8.91□□□□□ -0.98
PTPRK-203ENST00000368207 TRACP01848 142 aa8.91□□□□□ -0.98
PTPRK-203ENST00000368207 IBA57-AS1B1ANH7 110 aa8.9□□□□□ -0.98
PTPRK-203ENST00000368207 FUSP35637 526 aaKnown RBP eCLIP8.9□□□□□ -0.983e-6■■■■□ 20.3
PTPRK-203ENST00000368207 RETNQ9HD89 108 aa8.9□□□□□ -0.98
PTPRK-203ENST00000368207 SPANXB1Q9NS25 103 aaPredicted RBP8.9□□□□□ -0.98
PTPRK-203ENST00000368207 LINC00959A0A1B0GUT2 108 aa8.9□□□□□ -0.99
PTPRK-203ENST00000368207 UBE2AP49459 152 aa8.9□□□□□ -0.99
PTPRK-203ENST00000368207 NANOS2P60321 138 aaKnown RBP8.89□□□□□ -0.99
PTPRK-203ENST00000368207 TRAV10A0A0B4J240 114 aa8.89□□□□□ -0.99
PTPRK-203ENST00000368207 ACYP1P07311 99 aa8.89□□□□□ -0.99
PTPRK-203ENST00000368207 UBE2D1P51668 147 aa8.89□□□□□ -0.99
PTPRK-203ENST00000368207 C16orf95Q9H693 158 aa8.88□□□□□ -0.99
PTPRK-203ENST00000368207 ZNF292O60281 2723 aa8.88□□□□□ -0.99
PTPRK-203ENST00000368207 MGAM2Q2M2H8 2515 aa8.88□□□□□ -0.99
PTPRK-203ENST00000368207 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.88□□□□□ -0.99
PTPRK-203ENST00000368207 A0A096LNJ9 63 aa8.88□□□□□ -0.99
PTPRK-203ENST00000368207 TRIAP1O43715 76 aa8.88□□□□□ -0.99
PTPRK-203ENST00000368207 COX7BP24311 80 aa8.88□□□□□ -0.99
PTPRK-203ENST00000368207 CDC42SE2Q9NRR3 84 aa8.88□□□□□ -0.99
PTPRK-203ENST00000368207 PKIGQ9Y2B9 76 aa8.88□□□□□ -0.99
PTPRK-203ENST00000368207 CD164L2Q6UWJ8 174 aa8.88□□□□□ -0.99
PTPRK-203ENST00000368207 MRPS36P82909 103 aaKnown RBP8.88□□□□□ -0.99
PTPRK-203ENST00000368207 LELP1Q5T871 98 aa8.88□□□□□ -0.99
PTPRK-203ENST00000368207 A0A0J9YWU9 116 aa8.87□□□□□ -0.99
PTPRK-203ENST00000368207 C14orf132Q9NPU4 83 aa8.87□□□□□ -0.99
PTPRK-203ENST00000368207 IGLV2-18A0A075B6J9 118 aa8.87□□□□□ -0.99
PTPRK-203ENST00000368207 SLPIP03973 132 aa8.87□□□□□ -0.99
PTPRK-203ENST00000368207 JMJD7-PLA2G4BH0Y9G9 81 aa8.86□□□□□ -0.99
PTPRK-203ENST00000368207 RBM3P98179 157 aaKnown RBP8.86□□□□□ -0.99
PTPRK-203ENST00000368207 LINC00242Q5T6M2 205 aa8.86□□□□□ -0.99
PTPRK-203ENST00000368207 HIGD2AQ9BW72 106 aa8.86□□□□□ -0.99
PTPRK-203ENST00000368207 Q6ZSN1 163 aa8.86□□□□□ -0.99
PTPRK-203ENST00000368207 POM121L12Q8N7R1 296 aa8.86□□□□□ -0.99
PTPRK-203ENST00000368207 LINC00694P0DN24 101 aa8.86□□□□□ -0.99
PTPRK-203ENST00000368207 SYCNQ0VAF6 134 aa8.85□□□□□ -0.99
PTPRK-203ENST00000368207 IL17DQ8TAD2 202 aa8.85□□□□□ -0.99
PTPRK-203ENST00000368207 TEX49A0A1B0GTD5 131 aa8.85□□□□□ -0.99
PTPRK-203ENST00000368207 TMEM256-PLSCR3K7ERE1 68 aa8.85□□□□□ -0.99
PTPRK-203ENST00000368207 NREPQ16612 68 aa8.85□□□□□ -0.99
PTPRK-203ENST00000368207 SPANXDQ9BXN6 97 aa8.84□□□□□ -0.99
PTPRK-203ENST00000368207 MUC4Q99102 2169 aa8.84□□□□□ -0.99
PTPRK-203ENST00000368207 C6orf99Q4VX62 202 aa8.84□□□□□ -0.99
PTPRK-203ENST00000368207 RNF183Q96D59 192 aa8.84□□□□□ -0.99
PTPRK-203ENST00000368207 CFAP46Q8IYW2 2715 aa8.84□□□□□ -0.99
PTPRK-203ENST00000368207 G3V4G9 280 aa8.84□□□□□ -1
PTPRK-203ENST00000368207 CHCHD7Q9BUK0 85 aa8.84□□□□□ -1
PTPRK-203ENST00000368207 IGLV4-60A0A075B6I1 120 aa8.83□□□□□ -1
PTPRK-203ENST00000368207 FLNAP21333 2647 aaKnown RBP8.83□□□□□ -1
PTPRK-203ENST00000368207 COL27A1Q8IZC6 1860 aaPredicted RBP8.83□□□□□ -1
PTPRK-203ENST00000368207 FHL2Q14192 279 aa8.82□□□□□ -1
PTPRK-203ENST00000368207 ATRQ13535 2644 aa8.82□□□□□ -1
PTPRK-203ENST00000368207 IGLV4-69A0A075B6H9 119 aa8.82□□□□□ -1
PTPRK-203ENST00000368207 C14orf177Q52M58 125 aa8.82□□□□□ -1
PTPRK-203ENST00000368207 FAM19A5Q7Z5A7 132 aaPredicted RBP8.82□□□□□ -1
PTPRK-203ENST00000368207 HELZ2Q9BYK8 2649 aaKnown RBP8.82□□□□□ -1
PTPRK-203ENST00000368207 A0A096LNI7 61 aa8.81□□□□□ -1
PTPRK-203ENST00000368207 FAM236AA0A1B0GUQ0 79 aa8.81□□□□□ -1
PTPRK-203ENST00000368207 FAM236BA0A1B0GV22 79 aa8.81□□□□□ -1
PTPRK-203ENST00000368207 M0R2N4 97 aa8.81□□□□□ -1
PTPRK-203ENST00000368207 TIMM17BO60830 172 aa8.81□□□□□ -1
PTPRK-203ENST00000368207 MAST4O15021 2626 aa8.81□□□□□ -1
PTPRK-203ENST00000368207 TRBV30A0A0K0K1B3 111 aa8.81□□□□□ -1
PTPRK-203ENST00000368207 Q6ZTC4 211 aa8.81□□□□□ -1
PTPRK-203ENST00000368207 BEAN1Q3B7T3 259 aa8.81□□□□□ -1
PTPRK-203ENST00000368207 Q8N2B8 174 aa8.81□□□□□ -1
PTPRK-203ENST00000368207 CITED1Q99966 193 aa8.81□□□□□ -1
PTPRK-203ENST00000368207 NDUFS5O43920 106 aa8.8□□□□□ -1
PTPRK-203ENST00000368207 TSPEAR-AS2P59090 65 aa8.8□□□□□ -1
PTPRK-203ENST00000368207 COX6A2Q02221 97 aa8.8□□□□□ -1
PTPRK-203ENST00000368207 ITPR3Q14573 2671 aa8.8□□□□□ -1
PTPRK-203ENST00000368207 IGKV2-28A0A075B6P5 120 aa8.8□□□□□ -1
PTPRK-203ENST00000368207 IGKV2D-28P01615 120 aa8.8□□□□□ -1
PTPRK-203ENST00000368207 SMIM1B2RUZ4 78 aa8.79□□□□□ -1
PTPRK-203ENST00000368207 B5MCH6 92 aa8.79□□□□□ -1
PTPRK-203ENST00000368207 KIF25-AS1Q9Y6Z4 181 aa8.79□□□□□ -1
PTPRK-203ENST00000368207 H3BQ85 93 aa8.78□□□□□ -1
PTPRK-203ENST00000368207 SZT2Q5T011 3432 aa8.78□□□□□ -1
PTPRK-203ENST00000368207 A0A087WZ39 114 aa8.78□□□□□ -1
PTPRK-203ENST00000368207 A0A1B0GX51 115 aa8.78□□□□□ -1
PTPRK-203ENST00000368207 CYSRT1A8MQ03 144 aa8.78□□□□□ -1
PTPRK-203ENST00000368207 UNQ6190/PRO20217Q6UXQ8 127 aa8.78□□□□□ -1
PTPRK-203ENST00000368207 FAM19A1Q7Z5A9 133 aa8.78□□□□□ -1
PTPRK-203ENST00000368207 MAP1AP78559 2803 aaPredicted RBP8.78□□□□□ -1
PTPRK-203ENST00000368207 C9orf116Q5BN46 136 aaPredicted RBP8.77□□□□□ -1.01
PTPRK-203ENST00000368207 VPS13AQ96RL7 3174 aa8.77□□□□□ -1.01
PTPRK-203ENST00000368207 Q8IZM0 81 aa8.76□□□□□ -1.01
PTPRK-203ENST00000368207 AMELXQ99217 191 aa8.76□□□□□ -1.01
PTPRK-203ENST00000368207 SMIM11BQ8TCY0 68 aa8.76□□□□□ -1.01
PTPRK-203ENST00000368207 DSPP15924 2871 aaKnown RBP8.75□□□□□ -1.01
PTPRK-203ENST00000368207 TRAV23DV6A0A075B6W5 121 aa8.75□□□□□ -1.01
PTPRK-203ENST00000368207 C11orf72Q8NBR9 251 aa8.75□□□□□ -1.01
PTPRK-203ENST00000368207 Q6ZQY7 126 aa8.74□□□□□ -1.01
PTPRK-203ENST00000368207 B9D2Q9BPU9 175 aa8.74□□□□□ -1.01
PTPRK-203ENST00000368207 MT-ATP8P03928 68 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms