RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 IGHV3OR16-9A0A0B4J2B5 98 aa8.52□□□□□ -1.05
TNFRSF1A-202ENST00000366159 MALP21145 153 aa8.52□□□□□ -1.05
TNFRSF1A-202ENST00000366159 PTTG1IPP53801 180 aa8.52□□□□□ -1.05
TNFRSF1A-202ENST00000366159 C5orf38Q86SI9 138 aa8.52□□□□□ -1.05
TNFRSF1A-202ENST00000366159 OPRPNQ99935 248 aaPredicted RBP8.52□□□□□ -1.05
TNFRSF1A-202ENST00000366159 SPANXA1Q9NS26 97 aa8.52□□□□□ -1.05
TNFRSF1A-202ENST00000366159 LOC107984640A0A0U1RRK4 108 aa8.51□□□□□ -1.05
TNFRSF1A-202ENST00000366159 TMEM136Q6ZRR5 245 aa8.51□□□□□ -1.05
TNFRSF1A-202ENST00000366159 ORMDL3Q8N138 153 aa8.51□□□□□ -1.05
TNFRSF1A-202ENST00000366159 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.5□□□□□ -1.05
TNFRSF1A-202ENST00000366159 APOMO95445 188 aa8.49□□□□□ -1.05
TNFRSF1A-202ENST00000366159 PNRC1Q12796 327 aaPredicted RBP8.49□□□□□ -1.05
TNFRSF1A-202ENST00000366159 SRSF9Q13242 221 aaKnown RBP eCLIP8.49□□□□□ -1.05
TNFRSF1A-202ENST00000366159 RNF151Q2KHN1 245 aa8.49□□□□□ -1.05
TNFRSF1A-202ENST00000366159 OR10D4PQ8NGN7 298 aa8.49□□□□□ -1.05
TNFRSF1A-202ENST00000366159 PRELID3AQ96N28 172 aa8.49□□□□□ -1.05
TNFRSF1A-202ENST00000366159 CAMK2N2Q96S95 79 aa8.49□□□□□ -1.05
TNFRSF1A-202ENST00000366159 PYGO1Q9Y3Y4 419 aa8.49□□□□□ -1.05
TNFRSF1A-202ENST00000366159 A0A1W2PNN7 141 aa8.48□□□□□ -1.05
TNFRSF1A-202ENST00000366159 ANAPC16Q96DE5 110 aa8.48□□□□□ -1.05
TNFRSF1A-202ENST00000366159 LINC01600Q96MT4 127 aa8.48□□□□□ -1.05
TNFRSF1A-202ENST00000366159 SPAG11BQ08648 103 aa8.47□□□□□ -1.05
TNFRSF1A-202ENST00000366159 GAGE2BQ13066 116 aa8.47□□□□□ -1.05
TNFRSF1A-202ENST00000366159 LCE2AQ5TA79 106 aaPredicted RBP8.47□□□□□ -1.05
TNFRSF1A-202ENST00000366159 PLA2G2DQ9UNK4 145 aa8.47□□□□□ -1.05
TNFRSF1A-202ENST00000366159 LAMTOR2Q9Y2Q5 125 aa8.47□□□□□ -1.05
TNFRSF1A-202ENST00000366159 IGLV4-3A0A075B6K6 122 aa8.46□□□□□ -1.06
TNFRSF1A-202ENST00000366159 F8WDY8 70 aa8.46□□□□□ -1.06
TNFRSF1A-202ENST00000366159 SPINK6Q6UWN8 80 aa8.46□□□□□ -1.06
TNFRSF1A-202ENST00000366159 Q6ZRP5 223 aa8.46□□□□□ -1.06
TNFRSF1A-202ENST00000366159 MRPL35Q9NZE8 188 aaKnown RBP8.46□□□□□ -1.06
TNFRSF1A-202ENST00000366159 A0A0J9YXV3 536 aa8.45□□□□□ -1.06
TNFRSF1A-202ENST00000366159 IFITM10A6NMD0 228 aa8.45□□□□□ -1.06
TNFRSF1A-202ENST00000366159 MT-ND4LP03901 98 aa8.45□□□□□ -1.06
TNFRSF1A-202ENST00000366159 RAB5AP20339 215 aa8.45□□□□□ -1.06
TNFRSF1A-202ENST00000366159 A0A087WZ39 114 aa8.44□□□□□ -1.06
TNFRSF1A-202ENST00000366159 IFI27P40305 119 aaPredicted RBP8.44□□□□□ -1.06
TNFRSF1A-202ENST00000366159 KIAA0087Q14695 138 aa8.44□□□□□ -1.06
TNFRSF1A-202ENST00000366159 C9orf116Q5BN46 136 aaPredicted RBP8.44□□□□□ -1.06
TNFRSF1A-202ENST00000366159 LINC00242Q5T6M2 205 aa8.44□□□□□ -1.06
TNFRSF1A-202ENST00000366159 C10orf25Q5T742 122 aa8.44□□□□□ -1.06
TNFRSF1A-202ENST00000366159 Q8N8P6 123 aa8.44□□□□□ -1.06
TNFRSF1A-202ENST00000366159 ORAOV1Q8WV07 137 aa8.44□□□□□ -1.06
TNFRSF1A-202ENST00000366159 TLX1NBP0CAT3 122 aa8.43□□□□□ -1.06
TNFRSF1A-202ENST00000366159 KRTAP10-8P60410 259 aa8.43□□□□□ -1.06
TNFRSF1A-202ENST00000366159 RAB14P61106 215 aa8.43□□□□□ -1.06
TNFRSF1A-202ENST00000366159 CLLU1Q5K131 121 aa8.43□□□□□ -1.06
TNFRSF1A-202ENST00000366159 LOC389332A0A1B0GUA5 103 aa8.42□□□□□ -1.06
TNFRSF1A-202ENST00000366159 NDUFA1O15239 70 aa8.42□□□□□ -1.06
TNFRSF1A-202ENST00000366159 UNQ6190/PRO20217Q6UXQ8 127 aa8.42□□□□□ -1.06
TNFRSF1A-202ENST00000366159 LINC00173Q6ZV60 143 aa8.42□□□□□ -1.06
TNFRSF1A-202ENST00000366159 TMEM141Q96I45 108 aa8.42□□□□□ -1.06
TNFRSF1A-202ENST00000366159 MAP1LC3AQ9H492 121 aa8.42□□□□□ -1.06
TNFRSF1A-202ENST00000366159 UBE2D1P51668 147 aa8.41□□□□□ -1.06
TNFRSF1A-202ENST00000366159 RPL18AQ02543 176 aaKnown RBP8.41□□□□□ -1.06
TNFRSF1A-202ENST00000366159 FAM19A3Q7Z5A8 133 aa8.41□□□□□ -1.06
TNFRSF1A-202ENST00000366159 IMMP2LQ96T52 175 aa8.41□□□□□ -1.06
TNFRSF1A-202ENST00000366159 AMELXQ99217 191 aa8.41□□□□□ -1.06
TNFRSF1A-202ENST00000366159 C6orf48Q9UBA6 75 aa8.41□□□□□ -1.06
TNFRSF1A-202ENST00000366159 TGIF2-C20orf24A0A0A6YYL0 155 aa8.4□□□□□ -1.06
TNFRSF1A-202ENST00000366159 IGIPA6NJ69 53 aa8.4□□□□□ -1.06
TNFRSF1A-202ENST00000366159 K7EMI3 77 aa8.4□□□□□ -1.06
TNFRSF1A-202ENST00000366159 NPSP0C0P6 89 aa8.4□□□□□ -1.06
TNFRSF1A-202ENST00000366159 ADCYAP1P18509 176 aa8.4□□□□□ -1.06
TNFRSF1A-202ENST00000366159 LRP2P98164 4655 aa8.4□□□□□ -1.06
TNFRSF1A-202ENST00000366159 C2orf66Q6UXQ4 117 aa8.4□□□□□ -1.06
TNFRSF1A-202ENST00000366159 LINC01561Q8N1V8 128 aa8.4□□□□□ -1.06
TNFRSF1A-202ENST00000366159 PSORS1C2Q9UIG4 136 aa8.4□□□□□ -1.06
TNFRSF1A-202ENST00000366159 IFITM2Q01629 132 aa8.39□□□□□ -1.07
TNFRSF1A-202ENST00000366159 ORMDL2Q53FV1 153 aa8.39□□□□□ -1.07
TNFRSF1A-202ENST00000366159 ZC2HC1BQ5TFG8 222 aa8.39□□□□□ -1.07
TNFRSF1A-202ENST00000366159 TEX43Q6ZNM6 134 aa8.39□□□□□ -1.07
TNFRSF1A-202ENST00000366159 PHF5AQ7RTV0 110 aaKnown RBP8.39□□□□□ -1.07
TNFRSF1A-202ENST00000366159 CYSLTR1Q9Y271 337 aa8.39□□□□□ -1.07
TNFRSF1A-202ENST00000366159 REG3GQ6UW15 175 aa8.38□□□□□ -1.07
TNFRSF1A-202ENST00000366159 KRTAP7-1Q8IUC3 87 aa8.38□□□□□ -1.07
TNFRSF1A-202ENST00000366159 FAM168BA1KXE4 195 aa8.37□□□□□ -1.07
TNFRSF1A-202ENST00000366159 LORP23490 312 aaPredicted RBP8.37□□□□□ -1.07
TNFRSF1A-202ENST00000366159 ODF1Q14990 250 aa8.37□□□□□ -1.07
TNFRSF1A-202ENST00000366159 UQCC3Q6UW78 93 aa8.37□□□□□ -1.07
TNFRSF1A-202ENST00000366159 KRTAP11-1Q8IUC1 163 aa8.37□□□□□ -1.07
TNFRSF1A-202ENST00000366159 MRPL18Q9H0U6 180 aaKnown RBP8.37□□□□□ -1.07
TNFRSF1A-202ENST00000366159 NXT2Q9NPJ8 142 aaKnown RBP8.37□□□□□ -1.07
TNFRSF1A-202ENST00000366159 TRBV30A0A0K0K1B3 111 aa8.36□□□□□ -1.07
TNFRSF1A-202ENST00000366159 TMEM218A2RU14 115 aa8.36□□□□□ -1.07
TNFRSF1A-202ENST00000366159 C2orf82Q6UX34 121 aa8.36□□□□□ -1.07
TNFRSF1A-202ENST00000366159 CTDSP1Q9GZU7 261 aa8.36□□□□□ -1.07
TNFRSF1A-202ENST00000366159 VCX2Q9H322 139 aa8.36□□□□□ -1.07
TNFRSF1A-202ENST00000366159 RNF213Q63HN8 5207 aa8.36□□□□□ -1.07
TNFRSF1A-202ENST00000366159 C2orf88Q9BSF0 95 aa8.35□□□□□ -1.07
TNFRSF1A-202ENST00000366159 TRAV9-1A0A075B6T8 112 aa8.34□□□□□ -1.07
TNFRSF1A-202ENST00000366159 MT-ND6P03923 174 aa8.34□□□□□ -1.07
TNFRSF1A-202ENST00000366159 C1orf137Q5JT78 98 aa8.34□□□□□ -1.07
TNFRSF1A-202ENST00000366159 Q6ZN92 141 aa8.34□□□□□ -1.07
TNFRSF1A-202ENST00000366159 TOMM6Q96B49 74 aa8.34□□□□□ -1.07
TNFRSF1A-202ENST00000366159 TIMM17AQ99595 171 aa8.34□□□□□ -1.07
TNFRSF1A-202ENST00000366159 LINC01546A6NGU7 62 aa8.33□□□□□ -1.08
TNFRSF1A-202ENST00000366159 NDUFC2-KCTD14E9PQ53 114 aa8.33□□□□□ -1.08
TNFRSF1A-202ENST00000366159 KIAA1644Q3SXP7 199 aa8.33□□□□□ -1.08
TNFRSF1A-202ENST00000366159 IGLV7-43P04211 117 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms