RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 PRO1854Q9UHT4 67 aa12.81□□□□□ -0.36
PDLIM7-203ENST00000359895 A8MZ25 164 aa12.81□□□□□ -0.36
PDLIM7-203ENST00000359895 MIAQ16674 131 aa12.81□□□□□ -0.36
PDLIM7-203ENST00000359895 RNF183Q96D59 192 aa12.81□□□□□ -0.36
PDLIM7-203ENST00000359895 PAX4O43316 350 aa12.8□□□□□ -0.36
PDLIM7-203ENST00000359895 IGHV4-30-4P0DP06 118 aa12.8□□□□□ -0.36
PDLIM7-203ENST00000359895 DAD1P61803 113 aa12.8□□□□□ -0.36
PDLIM7-203ENST00000359895 CIRBPQ14011 172 aaKnown RBP12.8□□□□□ -0.36
PDLIM7-203ENST00000359895 F5H768 121 aa12.79□□□□□ -0.36
PDLIM7-203ENST00000359895 Q8NAQ8 132 aa12.79□□□□□ -0.36
PDLIM7-203ENST00000359895 IFITM1P13164 125 aa12.78□□□□□ -0.36
PDLIM7-203ENST00000359895 TENM1Q9UKZ4 2725 aa12.78□□□□□ -0.36
PDLIM7-203ENST00000359895 IGLV4-60A0A075B6I1 120 aa12.77□□□□□ -0.37
PDLIM7-203ENST00000359895 F8W1H4 67 aa12.77□□□□□ -0.37
PDLIM7-203ENST00000359895 ATP5G1P05496 136 aa12.77□□□□□ -0.37
PDLIM7-203ENST00000359895 PRSS2P07478 247 aa12.77□□□□□ -0.37
PDLIM7-203ENST00000359895 SPART-AS1P0CW21 52 aa12.77□□□□□ -0.37
PDLIM7-203ENST00000359895 OCIAD2Q56VL3 154 aa12.77□□□□□ -0.37
PDLIM7-203ENST00000359895 ADAMTSL4-AS1Q5T5F5 129 aa12.77□□□□□ -0.37
PDLIM7-203ENST00000359895 A0A1B0GUV1 79 aa12.76□□□□□ -0.37
PDLIM7-203ENST00000359895 HERV-K104P63124 156 aa12.76□□□□□ -0.37
PDLIM7-203ENST00000359895 Q9H8V8 135 aa12.76□□□□□ -0.37
PDLIM7-203ENST00000359895 DEFB4AO15263 64 aa12.75□□□□□ -0.37
PDLIM7-203ENST00000359895 STAB1Q9NY15 2570 aa12.74□□□□□ -0.37
PDLIM7-203ENST00000359895 LOC107984156A0A0G2JMH3 177 aa12.74□□□□□ -0.37
PDLIM7-203ENST00000359895 TEX48A0A1B0GUV7 120 aa12.74□□□□□ -0.37
PDLIM7-203ENST00000359895 K7ERU9 68 aa12.74□□□□□ -0.37
PDLIM7-203ENST00000359895 IGHV3-33P01772 117 aa12.74□□□□□ -0.37
PDLIM7-203ENST00000359895 ARL17AQ8IVW1 177 aa12.74□□□□□ -0.37
PDLIM7-203ENST00000359895 COPS9Q8WXC6 57 aa12.74□□□□□ -0.37
PDLIM7-203ENST00000359895 ERG28Q9UKR5 140 aa12.74□□□□□ -0.37
PDLIM7-203ENST00000359895 TRAV26-1A0A087WT03 109 aa12.73□□□□□ -0.37
PDLIM7-203ENST00000359895 H3BMG7 143 aa12.73□□□□□ -0.37
PDLIM7-203ENST00000359895 SHISA2Q6UWI4 295 aa12.73□□□□□ -0.37
PDLIM7-203ENST00000359895 C3orf56Q8N813 242 aa12.73□□□□□ -0.37
PDLIM7-203ENST00000359895 TRBV20-1A0A075B6N2 111 aa12.73□□□□□ -0.37
PDLIM7-203ENST00000359895 ZNF625Q96I27 306 aaPredicted RBP12.73□□□□□ -0.37
PDLIM7-203ENST00000359895 ANK2Q01484 3957 aa12.72□□□□□ -0.37
PDLIM7-203ENST00000359895 TMEM262E9PQX1 116 aa12.72□□□□□ -0.37
PDLIM7-203ENST00000359895 EIF4EBP3O60516 100 aaPredicted RBP12.72□□□□□ -0.37
PDLIM7-203ENST00000359895 CELA1Q9UNI1 258 aa12.72□□□□□ -0.37
PDLIM7-203ENST00000359895 IGKV3OR2-268A0A0C4DH90 116 aa12.71□□□□□ -0.37
PDLIM7-203ENST00000359895 SH2D6Q7Z4S9 175 aa12.71□□□□□ -0.37
PDLIM7-203ENST00000359895 IGHV3OR16-9A0A0B4J2B5 98 aa12.7□□□□□ -0.38
PDLIM7-203ENST00000359895 LINC00959A0A1B0GUT2 108 aa12.7□□□□□ -0.38
PDLIM7-203ENST00000359895 RBX1P62877 108 aa12.7□□□□□ -0.38
PDLIM7-203ENST00000359895 EGFEM1PQ0D2K5 195 aa12.7□□□□□ -0.38
PDLIM7-203ENST00000359895 OXLD1Q5BKU9 147 aa12.7□□□□□ -0.38
PDLIM7-203ENST00000359895 COX7B2Q8TF08 81 aa12.7□□□□□ -0.38
PDLIM7-203ENST00000359895 A0A087WZ39 114 aa12.69□□□□□ -0.38
PDLIM7-203ENST00000359895 PSMB2P49721 201 aa12.69□□□□□ -0.38
PDLIM7-203ENST00000359895 SS18Q15532 418 aa12.69□□□□□ -0.38
PDLIM7-203ENST00000359895 VWFP04275 2813 aa12.69□□□□□ -0.38
PDLIM7-203ENST00000359895 SCGB1C2P0DMR2 95 aa12.69□□□□□ -0.38
PDLIM7-203ENST00000359895 MRPL23Q16540 153 aaKnown RBP12.69□□□□□ -0.38
PDLIM7-203ENST00000359895 MEIG1Q5JSS6 88 aa12.69□□□□□ -0.38
PDLIM7-203ENST00000359895 PPDPFQ9H3Y8 114 aa12.69□□□□□ -0.38
PDLIM7-203ENST00000359895 A0A096LPF7 62 aa12.68□□□□□ -0.38
PDLIM7-203ENST00000359895 KRTAP10-11P60412 298 aa12.68□□□□□ -0.38
PDLIM7-203ENST00000359895 Q1RN00 199 aa12.67□□□□□ -0.38
PDLIM7-203ENST00000359895 SFTA2Q6UW10 78 aa12.67□□□□□ -0.38
PDLIM7-203ENST00000359895 LINC00308Q8TCZ7 52 aa12.67□□□□□ -0.38
PDLIM7-203ENST00000359895 PRO0461Q9UI25 63 aa12.67□□□□□ -0.38
PDLIM7-203ENST00000359895 NPC2P61916 151 aa12.66□□□□□ -0.38
PDLIM7-203ENST00000359895 LINC01561Q8N1V8 128 aa12.66□□□□□ -0.38
PDLIM7-203ENST00000359895 ICOSQ9Y6W8 199 aa12.66□□□□□ -0.38
PDLIM7-203ENST00000359895 WFDC2Q14508 124 aa12.65□□□□□ -0.38
PDLIM7-203ENST00000359895 CBY1Q9Y3M2 126 aa12.65□□□□□ -0.38
PDLIM7-203ENST00000359895 TRBV30A0A0K0K1B3 111 aa12.64□□□□□ -0.39
PDLIM7-203ENST00000359895 H7C2G1 150 aa12.64□□□□□ -0.39
PDLIM7-203ENST00000359895 TCL1BO95988 128 aa12.64□□□□□ -0.39
PDLIM7-203ENST00000359895 DAND5Q8N907 189 aa12.64□□□□□ -0.39
PDLIM7-203ENST00000359895 TOMM7Q9P0U1 55 aa12.64□□□□□ -0.39
PDLIM7-203ENST00000359895 HTN3P15516 51 aa12.63□□□□□ -0.39
PDLIM7-203ENST00000359895 RNF151Q2KHN1 245 aa12.63□□□□□ -0.39
PDLIM7-203ENST00000359895 G3V4G9 280 aa12.62□□□□□ -0.39
PDLIM7-203ENST00000359895 LELP1Q5T871 98 aa12.62□□□□□ -0.39
PDLIM7-203ENST00000359895 C5orf38Q86SI9 138 aa12.62□□□□□ -0.39
PDLIM7-203ENST00000359895 A0A0U1RRA0 63 aa12.6□□□□□ -0.39
PDLIM7-203ENST00000359895 COX6CP09669 75 aa12.6□□□□□ -0.39
PDLIM7-203ENST00000359895 XCL1P47992 114 aa12.6□□□□□ -0.39
PDLIM7-203ENST00000359895 RPL13AP40429 203 aaKnown RBP12.59□□□□□ -0.39
PDLIM7-203ENST00000359895 ATXN8Q156A1 80 aa12.59□□□□□ -0.39
PDLIM7-203ENST00000359895 C11orf68Q9H3H3 251 aaKnown RBP12.59□□□□□ -0.39
PDLIM7-203ENST00000359895 IBA57-AS1B1ANH7 110 aa12.58□□□□□ -0.4
PDLIM7-203ENST00000359895 H3BNG1 76 aa12.58□□□□□ -0.4
PDLIM7-203ENST00000359895 J3QR89 54 aa12.58□□□□□ -0.4
PDLIM7-203ENST00000359895 TRIAP1O43715 76 aa12.58□□□□□ -0.4
PDLIM7-203ENST00000359895 ANGP03950 147 aaKnown RBP12.58□□□□□ -0.4
PDLIM7-203ENST00000359895 ETDBQ3ZM63 59 aa12.58□□□□□ -0.4
PDLIM7-203ENST00000359895 SOSTDC1Q6X4U4 206 aa12.58□□□□□ -0.4
PDLIM7-203ENST00000359895 LINC00269Q8N2A0 174 aa12.58□□□□□ -0.4
PDLIM7-203ENST00000359895 VPS25Q9BRG1 176 aa12.58□□□□□ -0.4
PDLIM7-203ENST00000359895 REG3AQ06141 175 aa12.57□□□□□ -0.4
PDLIM7-203ENST00000359895 CD164L2Q6UWJ8 174 aa12.57□□□□□ -0.4
PDLIM7-203ENST00000359895 Q8IZM0 81 aa12.57□□□□□ -0.4
PDLIM7-203ENST00000359895 MTURNQ8N3F0 131 aa12.57□□□□□ -0.4
PDLIM7-203ENST00000359895 C6orf226Q5I0X4 101 aa12.56□□□□□ -0.4
PDLIM7-203ENST00000359895 CLPSL2Q6UWE3 100 aa12.56□□□□□ -0.4
PDLIM7-203ENST00000359895 TRRAPQ9Y4A5 3859 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms