RNA–Protein interactions for RNA: ENST00000359875.9

HHLA3-201, Transcript of HERV-H LTR-associating 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HHLA3, Length 898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3-201ENST00000359875 LINC00474Q9P2X8 69 aa4.23□□□□□ -1.73
HHLA3-201ENST00000359875 FAT3Q8TDW7 4589 aa4.22□□□□□ -1.73
HHLA3-201ENST00000359875 GVQW2A0A096LPI5 108 aaPredicted RBP4.22□□□□□ -1.73
HHLA3-201ENST00000359875 A0A1B0GXF2 115 aa4.22□□□□□ -1.73
HHLA3-201ENST00000359875 TCAPO15273 167 aa4.22□□□□□ -1.73
HHLA3-201ENST00000359875 FCER1GP30273 86 aa4.22□□□□□ -1.73
HHLA3-201ENST00000359875 CKS2P33552 79 aa4.22□□□□□ -1.73
HHLA3-201ENST00000359875 RPL32P62910 135 aaKnown RBP4.22□□□□□ -1.73
HHLA3-201ENST00000359875 CLLU1Q5K131 121 aa4.22□□□□□ -1.73
HHLA3-201ENST00000359875 MRPL54Q6P161 138 aaKnown RBP4.22□□□□□ -1.73
HHLA3-201ENST00000359875 ATP5L2Q7Z4Y8 100 aa4.22□□□□□ -1.73
HHLA3-201ENST00000359875 MRPL52Q86TS9 123 aaKnown RBP4.22□□□□□ -1.73
HHLA3-201ENST00000359875 C15orf56Q8N910 161 aa4.22□□□□□ -1.73
HHLA3-201ENST00000359875 CHCHD10Q8WYQ3 142 aaPredicted RBP4.22□□□□□ -1.73
HHLA3-201ENST00000359875 C20orf78Q9BR46 151 aa4.22□□□□□ -1.73
HHLA3-201ENST00000359875 TRBV24-1A0A075B6N3 115 aa4.21□□□□□ -1.74
HHLA3-201ENST00000359875 PRYO14603 147 aa4.21□□□□□ -1.74
HHLA3-201ENST00000359875 PHOX2AO14813 284 aa4.21□□□□□ -1.74
HHLA3-201ENST00000359875 PPBPP02775 128 aa4.21□□□□□ -1.74
HHLA3-201ENST00000359875 COX6A2Q02221 97 aa4.21□□□□□ -1.74
HHLA3-201ENST00000359875 TMEM18Q96B42 140 aa4.21□□□□□ -1.74
HHLA3-201ENST00000359875 CSDC2Q9Y534 153 aaKnown RBP4.21□□□□□ -1.74
HHLA3-201ENST00000359875 LINC00959A0A1B0GUT2 108 aa4.2□□□□□ -1.74
HHLA3-201ENST00000359875 D6R8Y8 96 aa4.2□□□□□ -1.74
HHLA3-201ENST00000359875 CCL25O15444 150 aa4.2□□□□□ -1.74
HHLA3-201ENST00000359875 MT-ND4LP03901 98 aa4.2□□□□□ -1.74
HHLA3-201ENST00000359875 CHTF8P0CG12 524 aa4.2□□□□□ -1.74
HHLA3-201ENST00000359875 SS18Q15532 418 aa4.2□□□□□ -1.74
HHLA3-201ENST00000359875 ZNF664Q8N3J9 261 aa4.2□□□□□ -1.74
HHLA3-201ENST00000359875 SMIM2Q9BVW6 85 aa4.2□□□□□ -1.74
HHLA3-201ENST00000359875 CDC42SE2Q9NRR3 84 aa4.2□□□□□ -1.74
HHLA3-201ENST00000359875 IGHV1-58A0A0C4DH39 117 aa4.19□□□□□ -1.74
HHLA3-201ENST00000359875 C1orf196B1AJZ1 125 aa4.19□□□□□ -1.74
HHLA3-201ENST00000359875 NPYP01303 97 aa4.19□□□□□ -1.74
HHLA3-201ENST00000359875 XCL1P47992 114 aa4.19□□□□□ -1.74
HHLA3-201ENST00000359875 PRR3P79522 188 aaKnown RBP4.19□□□□□ -1.74
HHLA3-201ENST00000359875 IFITM2Q01629 132 aa4.19□□□□□ -1.74
HHLA3-201ENST00000359875 MAJINQ3KP22 176 aa4.19□□□□□ -1.74
HHLA3-201ENST00000359875 UQCC3Q6UW78 93 aa4.19□□□□□ -1.74
HHLA3-201ENST00000359875 TMEM136Q6ZRR5 245 aa4.19□□□□□ -1.74
HHLA3-201ENST00000359875 ORMDL3Q8N138 153 aa4.19□□□□□ -1.74
HHLA3-201ENST00000359875 STPG4Q8N801 248 aa4.19□□□□□ -1.74
HHLA3-201ENST00000359875 LINC01600Q96MT4 127 aa4.19□□□□□ -1.74
HHLA3-201ENST00000359875 TIMM21Q9BVV7 248 aa4.19□□□□□ -1.74
HHLA3-201ENST00000359875 UBE2D4Q9Y2X8 147 aa4.19□□□□□ -1.74
HHLA3-201ENST00000359875 IGKV2-24A0A0C4DH68 120 aa4.18□□□□□ -1.74
HHLA3-201ENST00000359875 HIGD2BQ4VC39 106 aa4.18□□□□□ -1.74
HHLA3-201ENST00000359875 REG3GQ6UW15 175 aa4.18□□□□□ -1.74
HHLA3-201ENST00000359875 CD164L2Q6UWJ8 174 aa4.18□□□□□ -1.74
HHLA3-201ENST00000359875 SPINK6Q6UWN8 80 aa4.18□□□□□ -1.74
HHLA3-201ENST00000359875 PRSS3P2Q8NHM4 247 aa4.18□□□□□ -1.74
HHLA3-201ENST00000359875 PRELID3AQ96N28 172 aa4.18□□□□□ -1.74
HHLA3-201ENST00000359875 LAMTOR2Q9Y2Q5 125 aa4.18□□□□□ -1.74
HHLA3-201ENST00000359875 PKHD1L1Q86WI1 4243 aa4.17□□□□□ -1.74
HHLA3-201ENST00000359875 A0A096LNI7 61 aa4.17□□□□□ -1.74
HHLA3-201ENST00000359875 A0A0J9YXV3 536 aa4.17□□□□□ -1.74
HHLA3-201ENST00000359875 TMEM218A2RU14 115 aa4.17□□□□□ -1.74
HHLA3-201ENST00000359875 RAB5AP20339 215 aa4.17□□□□□ -1.74
HHLA3-201ENST00000359875 RPL39P62891 51 aaKnown RBP4.17□□□□□ -1.74
HHLA3-201ENST00000359875 Q6ZRP5 223 aa4.17□□□□□ -1.74
HHLA3-201ENST00000359875 Q6ZUT4 128 aa4.17□□□□□ -1.74
HHLA3-201ENST00000359875 CARD19Q96LW7 228 aa4.17□□□□□ -1.74
HHLA3-201ENST00000359875 IMMP2LQ96T52 175 aa4.17□□□□□ -1.74
HHLA3-201ENST00000359875 MAP1LC3AQ9H492 121 aa4.17□□□□□ -1.74
HHLA3-201ENST00000359875 SPANXA1Q9NS26 97 aa4.17□□□□□ -1.74
HHLA3-201ENST00000359875 A0A0A0MQY5 61 aa4.16□□□□□ -1.74
HHLA3-201ENST00000359875 TRAV13-1A0A0B4J241 112 aa4.16□□□□□ -1.74
HHLA3-201ENST00000359875 COX7A2LO14548 114 aa4.16□□□□□ -1.74
HHLA3-201ENST00000359875 IGKV2-30P06310 120 aa4.16□□□□□ -1.74
HHLA3-201ENST00000359875 ADCYAP1P18509 176 aa4.16□□□□□ -1.74
HHLA3-201ENST00000359875 MRPS36P82909 103 aaKnown RBP4.16□□□□□ -1.74
HHLA3-201ENST00000359875 SYCNQ0VAF6 134 aa4.16□□□□□ -1.74
HHLA3-201ENST00000359875 RNASE13Q5GAN3 156 aaKnown RBP4.16□□□□□ -1.74
HHLA3-201ENST00000359875 SEC11CQ9BY50 192 aa4.16□□□□□ -1.74
HHLA3-201ENST00000359875 TRAV9-1A0A075B6T8 112 aa4.15□□□□□ -1.75
HHLA3-201ENST00000359875 LOC107984640A0A0U1RRK4 108 aa4.15□□□□□ -1.75
HHLA3-201ENST00000359875 LOC389332A0A1B0GUA5 103 aa4.15□□□□□ -1.75
HHLA3-201ENST00000359875 APOMO95445 188 aa4.15□□□□□ -1.75
HHLA3-201ENST00000359875 IFI27P40305 119 aaPredicted RBP4.15□□□□□ -1.75
HHLA3-201ENST00000359875 PYGO1Q9Y3Y4 419 aa4.15□□□□□ -1.75
HHLA3-201ENST00000359875 IGLV4-69A0A075B6H9 119 aa4.14□□□□□ -1.75
HHLA3-201ENST00000359875 IFITM10A6NMD0 228 aa4.14□□□□□ -1.75
HHLA3-201ENST00000359875 K7EMI3 77 aa4.14□□□□□ -1.75
HHLA3-201ENST00000359875 NPSP0C0P6 89 aa4.14□□□□□ -1.75
HHLA3-201ENST00000359875 VPREB1P12018 145 aa4.14□□□□□ -1.75
HHLA3-201ENST00000359875 S100PP25815 95 aa4.14□□□□□ -1.75
HHLA3-201ENST00000359875 SRSF9Q13242 221 aaKnown RBP eCLIP4.14□□□□□ -1.75
HHLA3-201ENST00000359875 ORMDL2Q53FV1 153 aa4.14□□□□□ -1.75
HHLA3-201ENST00000359875 LCE1AQ5T7P2 110 aa4.14□□□□□ -1.75
HHLA3-201ENST00000359875 C5orf38Q86SI9 138 aa4.14□□□□□ -1.75
HHLA3-201ENST00000359875 COMMD7Q86VX2 200 aa4.14□□□□□ -1.75
HHLA3-201ENST00000359875 Q8N8P6 123 aa4.14□□□□□ -1.75
HHLA3-201ENST00000359875 LINC00526Q96FQ7 95 aa4.14□□□□□ -1.75
HHLA3-201ENST00000359875 C2orf48Q96LS8 159 aa4.14□□□□□ -1.75
HHLA3-201ENST00000359875 NXT2Q9NPJ8 142 aaKnown RBP4.14□□□□□ -1.75
HHLA3-201ENST00000359875 CYSLTR1Q9Y271 337 aa4.14□□□□□ -1.75
HHLA3-201ENST00000359875 IGLV4-3A0A075B6K6 122 aa4.13□□□□□ -1.75
HHLA3-201ENST00000359875 IGHV3OR16-9A0A0B4J2B5 98 aa4.13□□□□□ -1.75
HHLA3-201ENST00000359875 F8WDY8 70 aa4.13□□□□□ -1.75
HHLA3-201ENST00000359875 G0S2P27469 103 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms