RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 TRAV12-3A0A0B4J271 114 aa2.93□□□□□ -1.94
CNGA1-201ENST00000358519 A0A0J9YX75 114 aa2.93□□□□□ -1.94
CNGA1-201ENST00000358519 RS1O15537 224 aa2.93□□□□□ -1.94
CNGA1-201ENST00000358519 MGPP08493 103 aa2.93□□□□□ -1.94
CNGA1-201ENST00000358519 TIRAPP58753 221 aa2.93□□□□□ -1.94
CNGA1-201ENST00000358519 NPC2P61916 151 aa2.93□□□□□ -1.94
CNGA1-201ENST00000358519 C4orf3Q8WVX3 66 aa2.93□□□□□ -1.94
CNGA1-201ENST00000358519 TIMM17AQ99595 171 aa2.93□□□□□ -1.94
CNGA1-201ENST00000358519 LITAFQ99732 161 aa2.93□□□□□ -1.94
CNGA1-201ENST00000358519 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.92□□□□□ -1.94
CNGA1-201ENST00000358519 PSMB8P28062 276 aa2.92□□□□□ -1.94
CNGA1-201ENST00000358519 FHL2Q14192 279 aa2.92□□□□□ -1.94
CNGA1-201ENST00000358519 C9orf85Q96MD7 179 aa2.92□□□□□ -1.94
CNGA1-201ENST00000358519 OPRPNQ99935 248 aaPredicted RBP2.92□□□□□ -1.94
CNGA1-201ENST00000358519 MGAM2Q2M2H8 2515 aa2.92□□□□□ -1.94
CNGA1-201ENST00000358519 IGHV3OR16-10A0A075B7F0 116 aa2.92□□□□□ -1.94
CNGA1-201ENST00000358519 IGHV3OR16-8A0A075B7F1 116 aa2.92□□□□□ -1.94
CNGA1-201ENST00000358519 A0A087WVE0 104 aa2.92□□□□□ -1.94
CNGA1-201ENST00000358519 CTSGP08311 255 aa2.92□□□□□ -1.94
CNGA1-201ENST00000358519 SYNJ2BPP57105 145 aa2.92□□□□□ -1.94
CNGA1-201ENST00000358519 ZNF415Q09FC8 603 aa2.92□□□□□ -1.94
CNGA1-201ENST00000358519 TMEM61Q8N0U2 210 aa2.92□□□□□ -1.94
CNGA1-201ENST00000358519 DAND5Q8N907 189 aa2.92□□□□□ -1.94
CNGA1-201ENST00000358519 IGKV3D-7A0A0C4DH55 119 aa2.91□□□□□ -1.94
CNGA1-201ENST00000358519 FAM236DA0A1B0GTK5 79 aa2.91□□□□□ -1.94
CNGA1-201ENST00000358519 H3BS24 57 aa2.91□□□□□ -1.94
CNGA1-201ENST00000358519 ATP6V0E1O15342 81 aa2.91□□□□□ -1.94
CNGA1-201ENST00000358519 BUB3O43684 328 aa2.91□□□□□ -1.94
CNGA1-201ENST00000358519 BAALC-AS2P0C853 105 aa2.91□□□□□ -1.94
CNGA1-201ENST00000358519 IGHV3-30-3P0DP02 117 aa2.91□□□□□ -1.94
CNGA1-201ENST00000358519 FAM236CP0DP71 79 aa2.91□□□□□ -1.94
CNGA1-201ENST00000358519 LINC01561Q8N1V8 128 aa2.91□□□□□ -1.94
CNGA1-201ENST00000358519 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.91□□□□□ -1.94
CNGA1-201ENST00000358519 PHLDA3Q9Y5J5 127 aa2.91□□□□□ -1.94
CNGA1-201ENST00000358519 V9GYY9 64 aa2.91□□□□□ -1.94
CNGA1-201ENST00000358519 ZANQ9Y493 2812 aa2.91□□□□□ -1.94
CNGA1-201ENST00000358519 A0A0J9YXV3 536 aa2.91□□□□□ -1.94
CNGA1-201ENST00000358519 USP17L23D6RBM5 183 aa2.91□□□□□ -1.94
CNGA1-201ENST00000358519 LYNX1G3V0Z9 82 aa2.91□□□□□ -1.94
CNGA1-201ENST00000358519 IGHV3-23P01764 117 aa2.91□□□□□ -1.94
CNGA1-201ENST00000358519 LYNX1P0DP58 116 aa2.91□□□□□ -1.94
CNGA1-201ENST00000358519 S100A4P26447 101 aaKnown RBP2.91□□□□□ -1.94
CNGA1-201ENST00000358519 POLR2KP53803 58 aaKnown RBP2.91□□□□□ -1.94
CNGA1-201ENST00000358519 MIAQ16674 131 aa2.91□□□□□ -1.94
CNGA1-201ENST00000358519 Q8N1X5 172 aa2.91□□□□□ -1.94
CNGA1-201ENST00000358519 C22orf24Q9Y442 160 aa2.91□□□□□ -1.94
CNGA1-201ENST00000358519 HRNRQ86YZ3 2850 aaPredicted RBP2.91□□□□□ -1.94
CNGA1-201ENST00000358519 IGHV3-35A0A0C4DH35 117 aa2.9□□□□□ -1.94
CNGA1-201ENST00000358519 VCYO14598 125 aa2.9□□□□□ -1.94
CNGA1-201ENST00000358519 NXPH4O95158 308 aa2.9□□□□□ -1.94
CNGA1-201ENST00000358519 INAFM2P0DMQ5 153 aa2.9□□□□□ -1.94
CNGA1-201ENST00000358519 PRB3Q04118 309 aaPredicted RBP2.9□□□□□ -1.94
CNGA1-201ENST00000358519 C15orf32Q32M92 178 aa2.9□□□□□ -1.94
CNGA1-201ENST00000358519 PRR9Q5T870 116 aa2.9□□□□□ -1.94
CNGA1-201ENST00000358519 TRAV12-2A0A075B6T6 113 aa2.9□□□□□ -1.95
CNGA1-201ENST00000358519 IGHV4OR15-8A0A075B7B6 117 aa2.9□□□□□ -1.95
CNGA1-201ENST00000358519 A0A087WW49 117 aa2.9□□□□□ -1.95
CNGA1-201ENST00000358519 EPM2AB3EWF7 344 aa2.9□□□□□ -1.95
CNGA1-201ENST00000358519 NDUFC2-KCTD14E9PQ53 114 aa2.9□□□□□ -1.95
CNGA1-201ENST00000358519 H3BUX3 64 aa2.9□□□□□ -1.95
CNGA1-201ENST00000358519 COX7A2LO14548 114 aa2.9□□□□□ -1.95
CNGA1-201ENST00000358519 NDUFC2O95298 119 aa2.9□□□□□ -1.95
CNGA1-201ENST00000358519 HILS1P60008 231 aa2.9□□□□□ -1.95
CNGA1-201ENST00000358519 BEAN1Q3B7T3 259 aa2.9□□□□□ -1.95
CNGA1-201ENST00000358519 TMEM243Q9BU79 118 aa2.9□□□□□ -1.95
CNGA1-201ENST00000358519 IGHV3-66A0A0C4DH42 116 aa2.89□□□□□ -1.95
CNGA1-201ENST00000358519 A0A0U1RQV1 116 aa2.89□□□□□ -1.95
CNGA1-201ENST00000358519 LINC00315P59091 139 aa2.89□□□□□ -1.95
CNGA1-201ENST00000358519 C1orf195Q5TG92 126 aa2.89□□□□□ -1.95
CNGA1-201ENST00000358519 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.89□□□□□ -1.95
CNGA1-201ENST00000358519 ZNF702PQ9H963 129 aa2.89□□□□□ -1.95
CNGA1-201ENST00000358519 NDUFA12Q9UI09 145 aa2.89□□□□□ -1.95
CNGA1-201ENST00000358519 MUC4Q99102 2169 aa2.89□□□□□ -1.95
CNGA1-201ENST00000358519 TRBV27A0A0K0K1C4 114 aa2.89□□□□□ -1.95
CNGA1-201ENST00000358519 CLPSL1A2RUU4 121 aa2.89□□□□□ -1.95
CNGA1-201ENST00000358519 A8MZ25 164 aa2.89□□□□□ -1.95
CNGA1-201ENST00000358519 SNRPD3P62318 126 aaKnown RBP2.89□□□□□ -1.95
CNGA1-201ENST00000358519 Q6JHZ5 121 aa2.89□□□□□ -1.95
CNGA1-201ENST00000358519 C16orf92Q96LL3 132 aa2.89□□□□□ -1.95
CNGA1-201ENST00000358519 SERP1Q9Y6X1 66 aa2.89□□□□□ -1.95
CNGA1-201ENST00000358519 NBEAL2Q6ZNJ1 2754 aa2.89□□□□□ -1.95
CNGA1-201ENST00000358519 IGHV3OR16-13A0A075B7E8 117 aa2.89□□□□□ -1.95
CNGA1-201ENST00000358519 IGHV3-74A0A0B4J1X5 117 aa2.89□□□□□ -1.95
CNGA1-201ENST00000358519 TRAV21A0A0B4J279 112 aa2.89□□□□□ -1.95
CNGA1-201ENST00000358519 F5H697 171 aa2.89□□□□□ -1.95
CNGA1-201ENST00000358519 SOCS3O14543 225 aa2.89□□□□□ -1.95
CNGA1-201ENST00000358519 GNRH2O43555 120 aa2.89□□□□□ -1.95
CNGA1-201ENST00000358519 DNAL4O96015 105 aa2.89□□□□□ -1.95
CNGA1-201ENST00000358519 CIRBPQ14011 172 aaKnown RBP2.89□□□□□ -1.95
CNGA1-201ENST00000358519 DEFB112Q30KQ8 113 aa2.89□□□□□ -1.95
CNGA1-201ENST00000358519 FAM222AQ5U5X8 452 aa2.89□□□□□ -1.95
CNGA1-201ENST00000358519 SUMO4Q6EEV6 95 aa2.89□□□□□ -1.95
CNGA1-201ENST00000358519 KRTAP3-1Q9BYR8 98 aa2.89□□□□□ -1.95
CNGA1-201ENST00000358519 LINC00846Q9NV44 126 aa2.89□□□□□ -1.95
CNGA1-201ENST00000358519 KIF25-AS1Q9Y6Z4 181 aa2.89□□□□□ -1.95
CNGA1-201ENST00000358519 CR1P17927 2039 aa2.88□□□□□ -1.95
CNGA1-201ENST00000358519 WNK2Q9Y3S1 2297 aa2.88□□□□□ -1.95
CNGA1-201ENST00000358519 WNK1Q9H4A3 2382 aa2.88□□□□□ -1.95
CNGA1-201ENST00000358519 IGHV1-58A0A0C4DH39 117 aa2.88□□□□□ -1.95
CNGA1-201ENST00000358519 RNASE3P12724 160 aaKnown RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms