RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 C1orf137Q5JT78 98 aa10.83□□□□□ -0.68
LMX1B-201ENST00000355497 LINC01006Q8NI28 216 aa10.83□□□□□ -0.68
LMX1B-201ENST00000355497 GAS8-AS1O95177 125 aa10.83□□□□□ -0.68
LMX1B-201ENST00000355497 REG3GQ6UW15 175 aa10.83□□□□□ -0.68
LMX1B-201ENST00000355497 IGLV1-40P01703 118 aa10.82□□□□□ -0.68
LMX1B-201ENST00000355497 PSPHP1O15172 72 aa10.82□□□□□ -0.68
LMX1B-201ENST00000355497 SPINK1P00995 79 aa10.82□□□□□ -0.68
LMX1B-201ENST00000355497 BEAN1Q3B7T3 259 aa10.82□□□□□ -0.68
LMX1B-201ENST00000355497 CIRBP-AS1Q8TBR5 109 aa10.81□□□□□ -0.68
LMX1B-201ENST00000355497 KIF26AQ9ULI4 1882 aaPredicted RBP10.81□□□□□ -0.68
LMX1B-201ENST00000355497 IGIPA6NJ69 53 aa10.81□□□□□ -0.68
LMX1B-201ENST00000355497 EGFEM1PQ0D2K5 195 aa10.81□□□□□ -0.68
LMX1B-201ENST00000355497 NOTCH4Q99466 2003 aa10.81□□□□□ -0.68
LMX1B-201ENST00000355497 PCOTHQ58A44 107 aa10.81□□□□□ -0.68
LMX1B-201ENST00000355497 TRBV10-3A0A0K0K1G6 114 aa10.8□□□□□ -0.68
LMX1B-201ENST00000355497 LINC00242Q5T6M2 205 aa10.8□□□□□ -0.68
LMX1B-201ENST00000355497 UNQ6190/PRO20217Q6UXQ8 127 aa10.8□□□□□ -0.68
LMX1B-201ENST00000355497 TRBV7-7A0A0K0K1E9 115 aa10.79□□□□□ -0.68
LMX1B-201ENST00000355497 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.79□□□□□ -0.68
LMX1B-201ENST00000355497 DSCAML1Q8TD84 2053 aa10.79□□□□□ -0.68
LMX1B-201ENST00000355497 ARHGAP21Q5T5U3 1957 aa10.79□□□□□ -0.68
LMX1B-201ENST00000355497 A0A087WYN8 130 aa10.79□□□□□ -0.68
LMX1B-201ENST00000355497 CNFNQ9BYD5 112 aa10.78□□□□□ -0.68
LMX1B-201ENST00000355497 A0A087WVE0 104 aa10.78□□□□□ -0.68
LMX1B-201ENST00000355497 ADAMTS9Q9P2N4 1935 aa10.78□□□□□ -0.68
LMX1B-201ENST00000355497 SMIM1B2RUZ4 78 aa10.77□□□□□ -0.68
LMX1B-201ENST00000355497 GPR179Q6PRD1 2367 aa10.77□□□□□ -0.69
LMX1B-201ENST00000355497 ZNF106Q9H2Y7 1883 aaKnown RBP10.77□□□□□ -0.69
LMX1B-201ENST00000355497 ZNF843Q8N446 348 aa10.77□□□□□ -0.69
LMX1B-201ENST00000355497 SHANK1Q9Y566 2161 aa10.77□□□□□ -0.69
LMX1B-201ENST00000355497 C9orf116Q5BN46 136 aaPredicted RBP10.76□□□□□ -0.69
LMX1B-201ENST00000355497 LINC01547P58512 204 aaPredicted RBP10.76□□□□□ -0.69
LMX1B-201ENST00000355497 PLCE1Q9P212 2302 aa10.76□□□□□ -0.69
LMX1B-201ENST00000355497 C6orf223Q8N319 242 aa10.75□□□□□ -0.69
LMX1B-201ENST00000355497 H0Y9P7 68 aa10.75□□□□□ -0.69
LMX1B-201ENST00000355497 CRYGAP11844 174 aa10.75□□□□□ -0.69
LMX1B-201ENST00000355497 COX6A2Q02221 97 aa10.75□□□□□ -0.69
LMX1B-201ENST00000355497 CHCHD7Q9BUK0 85 aa10.75□□□□□ -0.69
LMX1B-201ENST00000355497 NUPR2A6NF83 97 aa10.74□□□□□ -0.69
LMX1B-201ENST00000355497 CRIP2P52943 208 aaPredicted RBP10.74□□□□□ -0.69
LMX1B-201ENST00000355497 CACNA1HO95180 2353 aa10.74□□□□□ -0.69
LMX1B-201ENST00000355497 CREBBPQ92793 2442 aa10.74□□□□□ -0.69
LMX1B-201ENST00000355497 Q9BRP9 147 aa10.73□□□□□ -0.69
LMX1B-201ENST00000355497 Q8N3U1 123 aa10.72□□□□□ -0.69
LMX1B-201ENST00000355497 CSDC2Q9Y534 153 aaKnown RBP10.72□□□□□ -0.69
LMX1B-201ENST00000355497 RIF1Q5UIP0 2472 aaKnown RBP10.72□□□□□ -0.69
LMX1B-201ENST00000355497 PCNX2A6NKB5 2137 aa10.72□□□□□ -0.69
LMX1B-201ENST00000355497 PRR3P79522 188 aaKnown RBP10.72□□□□□ -0.69
LMX1B-201ENST00000355497 LINC00575Q6W349 94 aa10.71□□□□□ -0.7
LMX1B-201ENST00000355497 IGLV5-52A0A0A0MRZ9 124 aa10.71□□□□□ -0.7
LMX1B-201ENST00000355497 PCNX1Q96RV3 2341 aa10.7□□□□□ -0.7
LMX1B-201ENST00000355497 TSPEAR-AS2P59090 65 aa10.7□□□□□ -0.7
LMX1B-201ENST00000355497 NCOA6Q14686 2063 aaPredicted RBP10.69□□□□□ -0.7
LMX1B-201ENST00000355497 TNCP24821 2201 aa10.69□□□□□ -0.7
LMX1B-201ENST00000355497 ALPK3Q96L96 1907 aa10.69□□□□□ -0.7
LMX1B-201ENST00000355497 IGLV4-60A0A075B6I1 120 aa10.69□□□□□ -0.7
LMX1B-201ENST00000355497 SERTAD4-AS1Q5TG53 156 aa10.69□□□□□ -0.7
LMX1B-201ENST00000355497 F8WDY8 70 aa10.68□□□□□ -0.7
LMX1B-201ENST00000355497 OXLD1Q5BKU9 147 aa10.68□□□□□ -0.7
LMX1B-201ENST00000355497 URB1-AS1Q96HZ7 61 aa10.68□□□□□ -0.7
LMX1B-201ENST00000355497 EDN2P20800 178 aa10.68□□□□□ -0.7
LMX1B-201ENST00000355497 ODF3L2Q3SX64 289 aa10.68□□□□□ -0.7
LMX1B-201ENST00000355497 ADAMTSL4-AS1Q5T5F5 129 aa10.68□□□□□ -0.7
LMX1B-201ENST00000355497 KIAA1549LQ6ZVL6 1849 aa10.67□□□□□ -0.7
LMX1B-201ENST00000355497 PLA2G2AP14555 144 aa10.67□□□□□ -0.7
LMX1B-201ENST00000355497 LINC01556Q5JQF7 62 aa10.67□□□□□ -0.7
LMX1B-201ENST00000355497 A0A087WSZ3 146 aa10.66□□□□□ -0.7
LMX1B-201ENST00000355497 LINC00310P59036 64 aa10.66□□□□□ -0.7
LMX1B-201ENST00000355497 FHL2Q14192 279 aa10.66□□□□□ -0.7
LMX1B-201ENST00000355497 NBASA2RRP1 2371 aa10.66□□□□□ -0.7
LMX1B-201ENST00000355497 HCG22E2RYF7 251 aa10.66□□□□□ -0.7
LMX1B-201ENST00000355497 AMELXQ99217 191 aa10.66□□□□□ -0.7
LMX1B-201ENST00000355497 NUP210LQ5VU65 1888 aa10.65□□□□□ -0.7
LMX1B-201ENST00000355497 SBSPONQ8IVN8 264 aa10.65□□□□□ -0.7
LMX1B-201ENST00000355497 DEFB116Q30KQ4 102 aa10.64□□□□□ -0.71
LMX1B-201ENST00000355497 TMEM254Q8TBM7 123 aa10.64□□□□□ -0.71
LMX1B-201ENST00000355497 hDV103S1A0JD37 113 aa10.63□□□□□ -0.71
LMX1B-201ENST00000355497 C7orf65Q6ZTY9 151 aa10.62□□□□□ -0.71
LMX1B-201ENST00000355497 PLA2G1BP04054 148 aaKnown RBP10.62□□□□□ -0.71
LMX1B-201ENST00000355497 C2orf48Q96LS8 159 aa10.62□□□□□ -0.71
LMX1B-201ENST00000355497 IGLV1-51P01701 117 aa10.61□□□□□ -0.71
LMX1B-201ENST00000355497 PRLHP81277 87 aa10.61□□□□□ -0.71
LMX1B-201ENST00000355497 MED13LQ71F56 2210 aa10.61□□□□□ -0.71
LMX1B-201ENST00000355497 KIAA1549Q9HCM3 1950 aa10.61□□□□□ -0.71
LMX1B-201ENST00000355497 C2orf16Q68DN1 1984 aa10.61□□□□□ -0.71
LMX1B-201ENST00000355497 ZNF580Q9UK33 172 aa10.6□□□□□ -0.71
LMX1B-201ENST00000355497 Q6ZTC4 211 aa10.6□□□□□ -0.71
LMX1B-201ENST00000355497 BRI3O95415 125 aa10.6□□□□□ -0.71
LMX1B-201ENST00000355497 SPAG11AQ6PDA7 123 aa10.6□□□□□ -0.71
LMX1B-201ENST00000355497 A0A1B0GU69 56 aa10.59□□□□□ -0.71
LMX1B-201ENST00000355497 LIMD2Q9BT23 127 aa10.59□□□□□ -0.71
LMX1B-201ENST00000355497 AVPP01185 164 aa10.59□□□□□ -0.71
LMX1B-201ENST00000355497 C1orf64Q8NEQ6 169 aa10.59□□□□□ -0.71
LMX1B-201ENST00000355497 LINC01561Q8N1V8 128 aa10.58□□□□□ -0.72
LMX1B-201ENST00000355497 A0A1B0GUV1 79 aa10.57□□□□□ -0.72
LMX1B-201ENST00000355497 LINC00846Q9NV44 126 aa10.57□□□□□ -0.72
LMX1B-201ENST00000355497 HIVEP2P31629 2446 aa10.57□□□□□ -0.72
LMX1B-201ENST00000355497 FSHBP01225 129 aa10.57□□□□□ -0.72
LMX1B-201ENST00000355497 CXCL6P80162 114 aa10.57□□□□□ -0.72
LMX1B-201ENST00000355497 Q9UF83 564 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms