RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 NXT2Q9NPJ8 142 aaKnown RBP9.93□□□□□ -0.82
PDGFA-201ENST00000354513 MAJINQ3KP22 176 aa9.92□□□□□ -0.82
PDGFA-201ENST00000354513 CFAP161Q6P656 301 aa9.92□□□□□ -0.82
PDGFA-201ENST00000354513 C18orf32Q8TCD1 76 aa9.92□□□□□ -0.82
PDGFA-201ENST00000354513 DPH3Q96FX2 82 aa9.92□□□□□ -0.82
PDGFA-201ENST00000354513 H7C423 109 aa9.91□□□□□ -0.82
PDGFA-201ENST00000354513 RNASEKQ6P5S7 137 aaKnown RBP9.91□□□□□ -0.82
PDGFA-201ENST00000354513 ESDP10768 282 aa9.9□□□□□ -0.82
PDGFA-201ENST00000354513 AMMECR1LQ6DCA0 310 aa9.9□□□□□ -0.82
PDGFA-201ENST00000354513 FA2HQ7L5A8 372 aa9.9□□□□□ -0.82
PDGFA-201ENST00000354513 STPG4Q8N801 248 aa9.9□□□□□ -0.82
PDGFA-201ENST00000354513 OR5A1Q8NGJ0 315 aa9.9□□□□□ -0.82
PDGFA-201ENST00000354513 C7orf33Q8WU49 177 aa9.9□□□□□ -0.82
PDGFA-201ENST00000354513 LINC00526Q96FQ7 95 aa9.9□□□□□ -0.82
PDGFA-201ENST00000354513 LINC01600Q96MT4 127 aa9.9□□□□□ -0.82
PDGFA-201ENST00000354513 LINC00959A0A1B0GUT2 108 aa9.88□□□□□ -0.83
PDGFA-201ENST00000354513 K7EMI3 77 aa9.88□□□□□ -0.83
PDGFA-201ENST00000354513 ORMDL2Q53FV1 153 aa9.88□□□□□ -0.83
PDGFA-201ENST00000354513 CCL25O15444 150 aa9.87□□□□□ -0.83
PDGFA-201ENST00000354513 ZNF25P17030 456 aaPredicted RBP9.87□□□□□ -0.83
PDGFA-201ENST00000354513 XCL1P47992 114 aa9.87□□□□□ -0.83
PDGFA-201ENST00000354513 RAB5BP61020 215 aa9.87□□□□□ -0.83
PDGFA-201ENST00000354513 BAGE3Q86Y29 109 aa9.87□□□□□ -0.83
PDGFA-201ENST00000354513 TMEM18Q96B42 140 aa9.87□□□□□ -0.83
PDGFA-201ENST00000354513 LINC01546A6NGU7 62 aa9.86□□□□□ -0.83
PDGFA-201ENST00000354513 LINC00614P0C842 121 aa9.86□□□□□ -0.83
PDGFA-201ENST00000354513 URB1-AS1Q96HZ7 61 aa9.86□□□□□ -0.83
PDGFA-201ENST00000354513 C1orf196B1AJZ1 125 aa9.85□□□□□ -0.83
PDGFA-201ENST00000354513 RPL39P62891 51 aaKnown RBP9.85□□□□□ -0.83
PDGFA-201ENST00000354513 IGHV1-58A0A0C4DH39 117 aa9.84□□□□□ -0.83
PDGFA-201ENST00000354513 HIST1H2BKO60814 126 aa9.84□□□□□ -0.83
PDGFA-201ENST00000354513 HIST1H2BJP06899 126 aa9.84□□□□□ -0.83
PDGFA-201ENST00000354513 HIST1H2BOP23527 126 aa9.84□□□□□ -0.83
PDGFA-201ENST00000354513 HIST1H2BBP33778 126 aa9.84□□□□□ -0.83
PDGFA-201ENST00000354513 HIST1H2BDP58876 126 aa9.84□□□□□ -0.83
PDGFA-201ENST00000354513 KRTAP10-8P60410 259 aa9.84□□□□□ -0.83
PDGFA-201ENST00000354513 HIST1H2BCP62807 126 aa9.84□□□□□ -0.83
PDGFA-201ENST00000354513 HIST2H2BEQ16778 126 aa9.84□□□□□ -0.83
PDGFA-201ENST00000354513 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.84□□□□□ -0.83
PDGFA-201ENST00000354513 HIST1H2BHQ93079 126 aa9.84□□□□□ -0.83
PDGFA-201ENST00000354513 CARD19Q96LW7 228 aa9.84□□□□□ -0.83
PDGFA-201ENST00000354513 HIST1H2BNQ99877 126 aa9.84□□□□□ -0.83
PDGFA-201ENST00000354513 HIST1H2BMQ99879 126 aa9.84□□□□□ -0.83
PDGFA-201ENST00000354513 A0A0J9YXV3 536 aa9.83□□□□□ -0.84
PDGFA-201ENST00000354513 G0S2P27469 103 aa9.83□□□□□ -0.84
PDGFA-201ENST00000354513 SMAGPQ0VAQ4 97 aa9.83□□□□□ -0.84
PDGFA-201ENST00000354513 SRSF9Q13242 221 aaKnown RBP eCLIP9.83□□□□□ -0.84
PDGFA-201ENST00000354513 C2orf66Q6UXQ4 117 aa9.83□□□□□ -0.84
PDGFA-201ENST00000354513 MRPL52Q86TS9 123 aaKnown RBP9.83□□□□□ -0.84
PDGFA-201ENST00000354513 TMEM101Q96IK0 257 aa9.83□□□□□ -0.84
PDGFA-201ENST00000354513 CDC42SE2Q9NRR3 84 aa9.83□□□□□ -0.84
PDGFA-201ENST00000354513 CYSLTR1Q9Y271 337 aa9.83□□□□□ -0.84
PDGFA-201ENST00000354513 RNF213Q63HN8 5207 aa9.83□□□□□ -0.84
PDGFA-201ENST00000354513 CHCHD1Q96BP2 118 aaKnown RBP9.82□□□□□ -0.84
PDGFA-201ENST00000354513 UBE2D4Q9Y2X8 147 aa9.82□□□□□ -0.84
PDGFA-201ENST00000354513 SERF1AO75920 110 aa9.82□□□□□ -0.84
PDGFA-201ENST00000354513 TIMM21Q9BVV7 248 aa9.82□□□□□ -0.84
PDGFA-201ENST00000354513 SPANXA1Q9NS26 97 aa9.82□□□□□ -0.84
PDGFA-201ENST00000354513 PMCHL1Q16048 86 aa9.81□□□□□ -0.84
PDGFA-201ENST00000354513 CD164L2Q6UWJ8 174 aa9.81□□□□□ -0.84
PDGFA-201ENST00000354513 SPINK6Q6UWN8 80 aa9.81□□□□□ -0.84
PDGFA-201ENST00000354513 TOMM6Q96B49 74 aa9.81□□□□□ -0.84
PDGFA-201ENST00000354513 HSBP1O75506 76 aa9.8□□□□□ -0.84
PDGFA-201ENST00000354513 PTTG1IPP53801 180 aa9.8□□□□□ -0.84
PDGFA-201ENST00000354513 SYCNQ0VAF6 134 aa9.8□□□□□ -0.84
PDGFA-201ENST00000354513 ZNF664Q8N3J9 261 aa9.8□□□□□ -0.84
PDGFA-201ENST00000354513 LINC00474Q9P2X8 69 aa9.8□□□□□ -0.84
PDGFA-201ENST00000354513 CSDC2Q9Y534 153 aaKnown RBP9.8□□□□□ -0.84
PDGFA-201ENST00000354513 HBDP02042 147 aa9.79□□□□□ -0.84
PDGFA-201ENST00000354513 NDUFA6P56556 154 aa9.79□□□□□ -0.84
PDGFA-201ENST00000354513 LINC00310P59036 64 aa9.79□□□□□ -0.84
PDGFA-201ENST00000354513 SS18Q15532 418 aa9.79□□□□□ -0.84
PDGFA-201ENST00000354513 PYGO1Q9Y3Y4 419 aa9.79□□□□□ -0.84
PDGFA-201ENST00000354513 LPAP08519 4548 aa9.79□□□□□ -0.84
PDGFA-201ENST00000354513 IGLV4-69A0A075B6H9 119 aa9.78□□□□□ -0.84
PDGFA-201ENST00000354513 A0A096LNJ9 63 aa9.78□□□□□ -0.84
PDGFA-201ENST00000354513 A0A1W2PNN7 141 aa9.78□□□□□ -0.84
PDGFA-201ENST00000354513 LINC01549A6NIU2 74 aa9.78□□□□□ -0.84
PDGFA-201ENST00000354513 NUPR1O60356 82 aa9.78□□□□□ -0.84
PDGFA-201ENST00000354513 RNASE13Q5GAN3 156 aaKnown RBP9.78□□□□□ -0.84
PDGFA-201ENST00000354513 Q6ZUT4 128 aa9.78□□□□□ -0.84
PDGFA-201ENST00000354513 SCGB3A1Q96QR1 104 aa9.78□□□□□ -0.84
PDGFA-201ENST00000354513 OPRPNQ99935 248 aaPredicted RBP9.78□□□□□ -0.84
PDGFA-201ENST00000354513 IGIPA6NJ69 53 aa9.77□□□□□ -0.85
PDGFA-201ENST00000354513 MRPS36P82909 103 aaKnown RBP9.77□□□□□ -0.85
PDGFA-201ENST00000354513 Q6ZRP5 223 aa9.77□□□□□ -0.85
PDGFA-201ENST00000354513 FAM19A2Q8N3H0 131 aa9.77□□□□□ -0.85
PDGFA-201ENST00000354513 IGLV4-3A0A075B6K6 122 aa9.76□□□□□ -0.85
PDGFA-201ENST00000354513 ZNF561-AS1K7EIQ3 104 aa9.76□□□□□ -0.85
PDGFA-201ENST00000354513 ERASQ7Z444 233 aa9.76□□□□□ -0.85
PDGFA-201ENST00000354513 FAM104AQ969W3 186 aa9.76□□□□□ -0.85
PDGFA-201ENST00000354513 TIMM17AQ99595 171 aa9.76□□□□□ -0.85
PDGFA-201ENST00000354513 PKIGQ9Y2B9 76 aa9.76□□□□□ -0.85
PDGFA-201ENST00000354513 LOC107984640A0A0U1RRK4 108 aa9.75□□□□□ -0.85
PDGFA-201ENST00000354513 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.75□□□□□ -0.85
PDGFA-201ENST00000354513 GAGE2BQ13066 116 aa9.75□□□□□ -0.85
PDGFA-201ENST00000354513 PDZD11Q5EBL8 140 aa9.75□□□□□ -0.85
PDGFA-201ENST00000354513 REG3GQ6UW15 175 aa9.75□□□□□ -0.85
PDGFA-201ENST00000354513 TMEM141Q96I45 108 aa9.75□□□□□ -0.85
PDGFA-201ENST00000354513 NPSP0C0P6 89 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms