RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 TRACP01848 142 aa17.35■□□□□ 0.37
CPNE1-202ENST00000352393 C16orf74Q96GX8 76 aa17.35■□□□□ 0.37
CPNE1-202ENST00000352393 EPG5Q9HCE0 2579 aa17.33■□□□□ 0.37
CPNE1-202ENST00000352393 LOC100131303A0A0U1RQF7 123 aa17.32■□□□□ 0.36
CPNE1-202ENST00000352393 TRBV6-4A0A1B0GX49 114 aa17.31■□□□□ 0.36
CPNE1-202ENST00000352393 GAGE7O76087 117 aa17.31■□□□□ 0.36
CPNE1-202ENST00000352393 GAGE12FP0CL80 117 aa17.31■□□□□ 0.36
CPNE1-202ENST00000352393 GAGE12GP0CL81 117 aa17.31■□□□□ 0.36
CPNE1-202ENST00000352393 GAGE12IP0CL82 117 aa17.31■□□□□ 0.36
CPNE1-202ENST00000352393 ESM1Q9NQ30 184 aa17.31■□□□□ 0.36
CPNE1-202ENST00000352393 TRGV2A0A075B6R0 118 aa17.3■□□□□ 0.36
CPNE1-202ENST00000352393 TRBV7-7A0A0K0K1E9 115 aa17.3■□□□□ 0.36
CPNE1-202ENST00000352393 CMC4P56277 68 aaPredicted RBP17.3■□□□□ 0.36
CPNE1-202ENST00000352393 FAM222AQ5U5X8 452 aa17.3■□□□□ 0.36
CPNE1-202ENST00000352393 COX7B2Q8TF08 81 aa17.3■□□□□ 0.36
CPNE1-202ENST00000352393 FAM218AQ96MZ4 157 aa17.29■□□□□ 0.36
CPNE1-202ENST00000352393 WFDC10AQ9H1F0 79 aa17.29■□□□□ 0.36
CPNE1-202ENST00000352393 TLN2Q9Y4G6 2542 aa17.29■□□□□ 0.36
CPNE1-202ENST00000352393 ACYP1P07311 99 aa17.29■□□□□ 0.36
CPNE1-202ENST00000352393 PF4P02776 101 aa17.28■□□□□ 0.36
CPNE1-202ENST00000352393 OVOL2Q9BRP0 275 aa17.28■□□□□ 0.36
CPNE1-202ENST00000352393 C22orf24Q9Y442 160 aa17.27■□□□□ 0.35
CPNE1-202ENST00000352393 TRAV13-2A0A0B4J235 113 aa17.26■□□□□ 0.35
CPNE1-202ENST00000352393 HIST2H2BCQ6DN03 193 aa17.26■□□□□ 0.35
CPNE1-202ENST00000352393 C19orf73Q9NVV2 129 aa17.26■□□□□ 0.35
CPNE1-202ENST00000352393 NOTCH3Q9UM47 2321 aa17.26■□□□□ 0.35
CPNE1-202ENST00000352393 B5MCH6 92 aa17.26■□□□□ 0.35
CPNE1-202ENST00000352393 RPL28P46779 137 aaKnown RBP17.26■□□□□ 0.35
CPNE1-202ENST00000352393 MIR7-3HGQ8N6C7 128 aa17.26■□□□□ 0.35
CPNE1-202ENST00000352393 CSNK1G2-AS1Q8NCQ2 148 aa17.26■□□□□ 0.35
CPNE1-202ENST00000352393 FAM110AQ9BQ89 295 aa17.26■□□□□ 0.35
CPNE1-202ENST00000352393 SETXQ7Z333 2677 aaKnown RBP17.25■□□□□ 0.35
CPNE1-202ENST00000352393 CCDC179H3BU77 68 aa17.25■□□□□ 0.35
CPNE1-202ENST00000352393 CRPP02741 224 aa17.25■□□□□ 0.35
CPNE1-202ENST00000352393 ITPR3Q14573 2671 aa17.24■□□□□ 0.35
CPNE1-202ENST00000352393 BAALC-AS2P0C853 105 aa17.24■□□□□ 0.35
CPNE1-202ENST00000352393 RPL35AP18077 110 aaKnown RBP17.24■□□□□ 0.35
CPNE1-202ENST00000352393 LINC00337Q8N6G1 96 aa17.24■□□□□ 0.35
CPNE1-202ENST00000352393 ZNF469Q96JG9 3925 aaPredicted RBP17.24■□□□□ 0.35
CPNE1-202ENST00000352393 IGKV2-28A0A075B6P5 120 aa17.23■□□□□ 0.35
CPNE1-202ENST00000352393 TRGV4A0A0C4DH28 118 aa17.23■□□□□ 0.35
CPNE1-202ENST00000352393 IGKV2D-28P01615 120 aa17.23■□□□□ 0.35
CPNE1-202ENST00000352393 SONP18583 2426 aaKnown RBP17.23■□□□□ 0.35
CPNE1-202ENST00000352393 IGLV4-60A0A075B6I1 120 aa17.23■□□□□ 0.35
CPNE1-202ENST00000352393 SS18L2Q9UHA2 77 aa17.23■□□□□ 0.35
CPNE1-202ENST00000352393 IGLV1-51P01701 117 aa17.22■□□□□ 0.35
CPNE1-202ENST00000352393 SND1-IT1Q9HBX3 110 aa17.22■□□□□ 0.35
CPNE1-202ENST00000352393 C2CD3Q4AC94 2353 aa17.22■□□□□ 0.35
CPNE1-202ENST00000352393 TRBV6-8A0A0A6YYG3 113 aa17.21■□□□□ 0.35
CPNE1-202ENST00000352393 IGHV3OR16-9A0A0B4J2B5 98 aa17.21■□□□□ 0.35
CPNE1-202ENST00000352393 TOMM7Q9P0U1 55 aa17.21■□□□□ 0.35
CPNE1-202ENST00000352393 FHL2Q14192 279 aa17.21■□□□□ 0.35
CPNE1-202ENST00000352393 WFDC11Q8NEX6 87 aa17.21■□□□□ 0.35
CPNE1-202ENST00000352393 SMCR5Q8TEV8 140 aa17.2■□□□□ 0.34
CPNE1-202ENST00000352393 IGKV3OR2-268A0A0C4DH90 116 aa17.2■□□□□ 0.34
CPNE1-202ENST00000352393 JMJD1CQ15652 2540 aa17.19■□□□□ 0.34
CPNE1-202ENST00000352393 APCP25054 2843 aa17.19■□□□□ 0.34
CPNE1-202ENST00000352393 PLA2G2AP14555 144 aa17.19■□□□□ 0.34
CPNE1-202ENST00000352393 LINC01006Q8NI28 216 aa17.19■□□□□ 0.34
CPNE1-202ENST00000352393 SDIM1Q6ZPB5 146 aa17.18■□□□□ 0.34
CPNE1-202ENST00000352393 A0A087WZ39 114 aa17.17■□□□□ 0.34
CPNE1-202ENST00000352393 CHCHD5Q9BSY4 110 aa17.17■□□□□ 0.34
CPNE1-202ENST00000352393 IMUPQ9GZP8 106 aa17.17■□□□□ 0.34
CPNE1-202ENST00000352393 C16orf95Q9H693 158 aa17.17■□□□□ 0.34
CPNE1-202ENST00000352393 NF1P21359 2839 aa17.17■□□□□ 0.34
CPNE1-202ENST00000352393 CCL18P55774 89 aa17.16■□□□□ 0.34
CPNE1-202ENST00000352393 LINC00158P58513 81 aa17.16■□□□□ 0.34
CPNE1-202ENST00000352393 IBA57-AS1B1ANH7 110 aa17.15■□□□□ 0.34
CPNE1-202ENST00000352393 Q9HAA7 133 aa17.15■□□□□ 0.34
CPNE1-202ENST00000352393 LINC00643Q86TS7 51 aa17.15■□□□□ 0.34
CPNE1-202ENST00000352393 MALP21145 153 aa17.14■□□□□ 0.33
CPNE1-202ENST00000352393 SMIM11BQ8TCY0 68 aa17.14■□□□□ 0.33
CPNE1-202ENST00000352393 INAFM2P0DMQ5 153 aa17.14■□□□□ 0.33
CPNE1-202ENST00000352393 RNASE1P07998 156 aaKnown RBP17.12■□□□□ 0.33
CPNE1-202ENST00000352393 KMT2BQ9UMN6 2715 aaPredicted RBP17.11■□□□□ 0.33
CPNE1-202ENST00000352393 A0A087WYN8 130 aa17.11■□□□□ 0.33
CPNE1-202ENST00000352393 C5orf38Q86SI9 138 aa17.11■□□□□ 0.33
CPNE1-202ENST00000352393 NIPBLQ6KC79 2804 aaeCLIP17.1■□□□□ 0.331e-8■□□□□ 10.5
CPNE1-202ENST00000352393 FLNAP21333 2647 aaKnown RBP17.1■□□□□ 0.33
CPNE1-202ENST00000352393 LINC00959A0A1B0GUT2 108 aa17.09■□□□□ 0.33
CPNE1-202ENST00000352393 KRTAP1-1Q07627 177 aa17.09■□□□□ 0.33
CPNE1-202ENST00000352393 FAM236AA0A1B0GUQ0 79 aa17.08■□□□□ 0.33
CPNE1-202ENST00000352393 FAM236BA0A1B0GV22 79 aa17.08■□□□□ 0.33
CPNE1-202ENST00000352393 H0YGX0 51 aa17.07■□□□□ 0.32
CPNE1-202ENST00000352393 PFN2P35080 140 aa17.07■□□□□ 0.32
CPNE1-202ENST00000352393 DNAL4O96015 105 aa17.06■□□□□ 0.32
CPNE1-202ENST00000352393 LINC00612Q8N6U2 182 aa17.06■□□□□ 0.32
CPNE1-202ENST00000352393 GAGE2AQ6NT46 116 aa17.05■□□□□ 0.32
CPNE1-202ENST00000352393 KIR2DL5BQ8NHK3 375 aa17.05■□□□□ 0.32
CPNE1-202ENST00000352393 CUBNO60494 3623 aa17.05■□□□□ 0.32
CPNE1-202ENST00000352393 SETD2Q9BYW2 2564 aaPredicted RBP17.04■□□□□ 0.32
CPNE1-202ENST00000352393 CCDC168Q8NDH2 2452 aa17.03■□□□□ 0.32
CPNE1-202ENST00000352393 LY6G6DO95868 133 aa17.03■□□□□ 0.32
CPNE1-202ENST00000352393 DEFB130BP0DP73 79 aa17.03■□□□□ 0.32
CPNE1-202ENST00000352393 DEFB130AP0DP74 79 aa17.03■□□□□ 0.32
CPNE1-202ENST00000352393 PAX4O43316 350 aa17.02■□□□□ 0.32
CPNE1-202ENST00000352393 NBPF19A0A087WUL8 3843 aa17.02■□□□□ 0.31
CPNE1-202ENST00000352393 OBSCN-AS1Q96MR7 158 aa17.02■□□□□ 0.31
CPNE1-202ENST00000352393 CXCL5P42830 114 aa17.01■□□□□ 0.31
CPNE1-202ENST00000352393 C9orf129Q5T035 196 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms