RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 IGKV2-28A0A075B6P5 120 aa11.63□□□□□ -0.55
PTPN11-201ENST00000351677 IGKV2D-28P01615 120 aa11.63□□□□□ -0.55
PTPN11-201ENST00000351677 SMIM11BQ8TCY0 68 aa11.63□□□□□ -0.55
PTPN11-201ENST00000351677 SHISA2Q6UWI4 295 aa11.63□□□□□ -0.55
PTPN11-201ENST00000351677 LST1O00453 97 aa11.63□□□□□ -0.55
PTPN11-201ENST00000351677 C20orf197Q8N268 126 aa11.63□□□□□ -0.55
PTPN11-201ENST00000351677 A0A087WZ39 114 aa11.62□□□□□ -0.55
PTPN11-201ENST00000351677 C4orf48Q5BLP8 95 aa11.61□□□□□ -0.55
PTPN11-201ENST00000351677 IGLV4-69A0A075B6H9 119 aa11.61□□□□□ -0.55
PTPN11-201ENST00000351677 LELP1Q5T871 98 aa11.61□□□□□ -0.55
PTPN11-201ENST00000351677 MRGPRG-AS1Q2M3A8 158 aa11.6□□□□□ -0.55
PTPN11-201ENST00000351677 LINC00242Q5T6M2 205 aa11.6□□□□□ -0.55
PTPN11-201ENST00000351677 Q6ZQY7 126 aa11.6□□□□□ -0.55
PTPN11-201ENST00000351677 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.59□□□□□ -0.55
PTPN11-201ENST00000351677 C1orf158Q8N1D5 194 aa11.59□□□□□ -0.55
PTPN11-201ENST00000351677 A0A096LNJ9 63 aa11.59□□□□□ -0.55
PTPN11-201ENST00000351677 TSPEAR-AS2P59090 65 aa11.58□□□□□ -0.55
PTPN11-201ENST00000351677 CCKP06307 115 aa11.58□□□□□ -0.56
PTPN11-201ENST00000351677 TRAV10A0A0B4J240 114 aa11.58□□□□□ -0.56
PTPN11-201ENST00000351677 UQCRQO14949 82 aa11.58□□□□□ -0.56
PTPN11-201ENST00000351677 KIR2DL5BQ8NHK3 375 aa11.58□□□□□ -0.56
PTPN11-201ENST00000351677 C3orf84H3BNL1 204 aa11.58□□□□□ -0.56
PTPN11-201ENST00000351677 COX6A2Q02221 97 aa11.58□□□□□ -0.56
PTPN11-201ENST00000351677 OXLD1Q5BKU9 147 aa11.58□□□□□ -0.56
PTPN11-201ENST00000351677 CHCHD7Q9BUK0 85 aa11.57□□□□□ -0.56
PTPN11-201ENST00000351677 IGLV2-18A0A075B6J9 118 aa11.57□□□□□ -0.56
PTPN11-201ENST00000351677 COX8CQ7Z4L0 72 aa11.57□□□□□ -0.56
PTPN11-201ENST00000351677 IL17DQ8TAD2 202 aa11.57□□□□□ -0.56
PTPN11-201ENST00000351677 LINC00694P0DN24 101 aa11.56□□□□□ -0.56
PTPN11-201ENST00000351677 ZNF580Q9UK33 172 aa11.56□□□□□ -0.56
PTPN11-201ENST00000351677 IGHV4-30-4P0DP06 118 aa11.55□□□□□ -0.56
PTPN11-201ENST00000351677 ATP5EP2Q5VTU8 51 aa11.55□□□□□ -0.56
PTPN11-201ENST00000351677 PLA2G2AP14555 144 aa11.55□□□□□ -0.56
PTPN11-201ENST00000351677 NANOS2P60321 138 aaKnown RBP11.55□□□□□ -0.56
PTPN11-201ENST00000351677 LRCOL1A6NCL2 159 aa11.54□□□□□ -0.56
PTPN11-201ENST00000351677 XGP55808 180 aa11.54□□□□□ -0.56
PTPN11-201ENST00000351677 RPL37AP8A6NKH3 93 aa11.54□□□□□ -0.56
PTPN11-201ENST00000351677 SMIM1B2RUZ4 78 aa11.54□□□□□ -0.56
PTPN11-201ENST00000351677 M0R378 163 aa11.54□□□□□ -0.56
PTPN11-201ENST00000351677 IGKV4-1P06312 121 aa11.54□□□□□ -0.56
PTPN11-201ENST00000351677 Q8IZM0 81 aa11.54□□□□□ -0.56
PTPN11-201ENST00000351677 C3orf22Q8N5N4 141 aa11.54□□□□□ -0.56
PTPN11-201ENST00000351677 ADAMTS20P59510 1910 aa11.54□□□□□ -0.56
PTPN11-201ENST00000351677 CYSRT1A8MQ03 144 aa11.53□□□□□ -0.56
PTPN11-201ENST00000351677 IGLV4-60A0A075B6I1 120 aa11.53□□□□□ -0.56
PTPN11-201ENST00000351677 A0A0J9YWU9 116 aa11.53□□□□□ -0.56
PTPN11-201ENST00000351677 Q6ZSN1 163 aa11.53□□□□□ -0.56
PTPN11-201ENST00000351677 PPDPFQ9H3Y8 114 aa11.52□□□□□ -0.56
PTPN11-201ENST00000351677 IGLV1-51P01701 117 aa11.52□□□□□ -0.57
PTPN11-201ENST00000351677 C9orf116Q5BN46 136 aaPredicted RBP11.52□□□□□ -0.57
PTPN11-201ENST00000351677 COX17Q14061 63 aa11.51□□□□□ -0.57
PTPN11-201ENST00000351677 WFDC10BQ8IUB3 73 aa11.51□□□□□ -0.57
PTPN11-201ENST00000351677 UNQ6190/PRO20217Q6UXQ8 127 aa11.51□□□□□ -0.57
PTPN11-201ENST00000351677 M0R2N4 97 aa11.51□□□□□ -0.57
PTPN11-201ENST00000351677 ADAMTSL4-AS1Q5T5F5 129 aa11.51□□□□□ -0.57
PTPN11-201ENST00000351677 RETNQ9HD89 108 aa11.51□□□□□ -0.57
PTPN11-201ENST00000351677 ZNF73O43830 326 aaPredicted RBP11.49□□□□□ -0.57
PTPN11-201ENST00000351677 BRI3O95415 125 aa11.49□□□□□ -0.57
PTPN11-201ENST00000351677 TET2Q6N021 2002 aaPredicted RBP11.49□□□□□ -0.57
PTPN11-201ENST00000351677 CEP295Q9C0D2 2601 aa11.49□□□□□ -0.57
PTPN11-201ENST00000351677 FAM236DA0A1B0GTK5 79 aa11.48□□□□□ -0.57
PTPN11-201ENST00000351677 FAM236CP0DP71 79 aa11.48□□□□□ -0.57
PTPN11-201ENST00000351677 PRR3P79522 188 aaKnown RBP11.48□□□□□ -0.57
PTPN11-201ENST00000351677 FHL2Q14192 279 aa11.48□□□□□ -0.57
PTPN11-201ENST00000351677 NDUFC2O95298 119 aa11.48□□□□□ -0.57
PTPN11-201ENST00000351677 AMELXQ99217 191 aa11.48□□□□□ -0.57
PTPN11-201ENST00000351677 USP17L23D6RBM5 183 aa11.47□□□□□ -0.57
PTPN11-201ENST00000351677 MPLKIPQ8TAP9 179 aa11.47□□□□□ -0.57
PTPN11-201ENST00000351677 TLN2Q9Y4G6 2542 aa11.47□□□□□ -0.57
PTPN11-201ENST00000351677 DHRS4-AS1Q9P1J3 65 aa11.46□□□□□ -0.58
PTPN11-201ENST00000351677 ANKRD11Q6UB99 2663 aaPredicted RBP11.45□□□□□ -0.58
PTPN11-201ENST00000351677 BRK1Q8WUW1 75 aa11.45□□□□□ -0.58
PTPN11-201ENST00000351677 CCDC179H3BU77 68 aa11.45□□□□□ -0.58
PTPN11-201ENST00000351677 SNURFQ9Y675 71 aa11.45□□□□□ -0.58
PTPN11-201ENST00000351677 IMUPQ9GZP8 106 aa11.44□□□□□ -0.58
PTPN11-201ENST00000351677 LOC107984640A0A0U1RRK4 108 aa11.44□□□□□ -0.58
PTPN11-201ENST00000351677 DNAH12Q6ZR08 3092 aa11.43□□□□□ -0.58
PTPN11-201ENST00000351677 USP9XQ93008 2570 aaPredicted RBP11.43□□□□□ -0.58
PTPN11-201ENST00000351677 SERP2Q8N6R1 65 aa11.43□□□□□ -0.58
PTPN11-201ENST00000351677 ABCA12Q86UK0 2595 aa11.43□□□□□ -0.58
PTPN11-201ENST00000351677 BEAN1Q3B7T3 259 aa11.43□□□□□ -0.58
PTPN11-201ENST00000351677 A0A087WYN8 130 aa11.43□□□□□ -0.58
PTPN11-201ENST00000351677 HRCT1Q6UXD1 115 aa11.43□□□□□ -0.58
PTPN11-201ENST00000351677 WFDC13Q8IUB5 93 aa11.42□□□□□ -0.58
PTPN11-201ENST00000351677 JMJD1CQ15652 2540 aa11.41□□□□□ -0.58
PTPN11-201ENST00000351677 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.41□□□□□ -0.58
PTPN11-201ENST00000351677 TRBV10-3A0A0K0K1G6 114 aa11.41□□□□□ -0.58
PTPN11-201ENST00000351677 CSDC2Q9Y534 153 aaKnown RBP11.41□□□□□ -0.58
PTPN11-201ENST00000351677 RPL28P46779 137 aaKnown RBP11.41□□□□□ -0.58
PTPN11-201ENST00000351677 C16orf95Q9H693 158 aa11.4□□□□□ -0.58
PTPN11-201ENST00000351677 AGRNO00468 2067 aa11.4□□□□□ -0.58
PTPN11-201ENST00000351677 Q8N814 137 aa11.39□□□□□ -0.59
PTPN11-201ENST00000351677 Q6ZTC4 211 aa11.39□□□□□ -0.59
PTPN11-201ENST00000351677 NTM-AS1Q6ZSK4 140 aa11.39□□□□□ -0.59
PTPN11-201ENST00000351677 SPINK6Q6UWN8 80 aa11.39□□□□□ -0.59
PTPN11-201ENST00000351677 C6orf223Q8N319 242 aa11.39□□□□□ -0.59
PTPN11-201ENST00000351677 KIF25-AS1Q9Y6Z4 181 aa11.38□□□□□ -0.59
PTPN11-201ENST00000351677 SETD2Q9BYW2 2564 aaPredicted RBP11.38□□□□□ -0.59
PTPN11-201ENST00000351677 MUC7Q8TAX7 377 aa11.38□□□□□ -0.59
PTPN11-201ENST00000351677 UTRNP46939 3433 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms