RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 HIVEP2P31629 2446 aa16.75■□□□□ 0.27
NPAS3-201ENST00000346562 CIRBP-AS1Q8TBR5 109 aa16.74■□□□□ 0.27
NPAS3-201ENST00000346562 RETNQ9HD89 108 aa16.74■□□□□ 0.27
NPAS3-201ENST00000346562 ESRGQ1W209 222 aa16.73■□□□□ 0.27
NPAS3-201ENST00000346562 TECTAO75443 2155 aa16.72■□□□□ 0.27
NPAS3-201ENST00000346562 SMR3AQ99954 134 aa16.72■□□□□ 0.27
NPAS3-201ENST00000346562 FSHBP01225 129 aa16.72■□□□□ 0.27
NPAS3-201ENST00000346562 ODF3L2Q3SX64 289 aa16.72■□□□□ 0.27
NPAS3-201ENST00000346562 Q6JHZ5 121 aa16.71■□□□□ 0.27
NPAS3-201ENST00000346562 IGLV1-51P01701 117 aa16.71■□□□□ 0.27
NPAS3-201ENST00000346562 C16orf95Q9H693 158 aa16.71■□□□□ 0.26
NPAS3-201ENST00000346562 POM121L12Q8N7R1 296 aa16.7■□□□□ 0.26
NPAS3-201ENST00000346562 F8WDY8 70 aa16.7■□□□□ 0.26
NPAS3-201ENST00000346562 C6orf223Q8N319 242 aa16.7■□□□□ 0.26
NPAS3-201ENST00000346562 NUP210LQ5VU65 1888 aa16.7■□□□□ 0.26
NPAS3-201ENST00000346562 UNQ6190/PRO20217Q6UXQ8 127 aa16.7■□□□□ 0.26
NPAS3-201ENST00000346562 PRR4Q16378 134 aa16.69■□□□□ 0.26
NPAS3-201ENST00000346562 AVPP01185 164 aa16.69■□□□□ 0.26
NPAS3-201ENST00000346562 CNFNQ9BYD5 112 aa16.68■□□□□ 0.26
NPAS3-201ENST00000346562 NTM-AS1Q6ZSK4 140 aa16.67■□□□□ 0.26
NPAS3-201ENST00000346562 A0A0U1RQV1 116 aa16.67■□□□□ 0.26
NPAS3-201ENST00000346562 C1orf137Q5JT78 98 aa16.67■□□□□ 0.26
NPAS3-201ENST00000346562 LINC00242Q5T6M2 205 aa16.67■□□□□ 0.26
NPAS3-201ENST00000346562 CREBBPQ92793 2442 aa16.67■□□□□ 0.26
NPAS3-201ENST00000346562 C2orf91Q6ZV80 131 aa16.65■□□□□ 0.26
NPAS3-201ENST00000346562 TRBV10-3A0A0K0K1G6 114 aa16.65■□□□□ 0.26
NPAS3-201ENST00000346562 IGIPA6NJ69 53 aa16.65■□□□□ 0.26
NPAS3-201ENST00000346562 CRIP2P52943 208 aaPredicted RBP16.65■□□□□ 0.26
NPAS3-201ENST00000346562 ZFHX2Q9C0A1 2572 aaPredicted RBP16.65■□□□□ 0.26
NPAS3-201ENST00000346562 BRI3O95415 125 aa16.64■□□□□ 0.25
NPAS3-201ENST00000346562 Q8N814 137 aa16.64■□□□□ 0.25
NPAS3-201ENST00000346562 COX7CP15954 63 aa16.64■□□□□ 0.25
NPAS3-201ENST00000346562 CDSNQ15517 529 aa16.64■□□□□ 0.25
NPAS3-201ENST00000346562 C1orf134Q5TEV5 83 aa16.64■□□□□ 0.25
NPAS3-201ENST00000346562 YPEL4Q96NS1 127 aa16.63■□□□□ 0.25
NPAS3-201ENST00000346562 IGHV6-1A0A0B4J1U7 121 aa16.63■□□□□ 0.25
NPAS3-201ENST00000346562 EDN2P20800 178 aa16.62■□□□□ 0.25
NPAS3-201ENST00000346562 Q6ZTC4 211 aa16.62■□□□□ 0.25
NPAS3-201ENST00000346562 NCOA6Q14686 2063 aaPredicted RBP16.62■□□□□ 0.25
NPAS3-201ENST00000346562 SMIM1B2RUZ4 78 aa16.62■□□□□ 0.25
NPAS3-201ENST00000346562 LINC01556Q5JQF7 62 aa16.62■□□□□ 0.25
NPAS3-201ENST00000346562 GAS8-AS1O95177 125 aa16.61■□□□□ 0.25
NPAS3-201ENST00000346562 FHL2Q14192 279 aa16.61■□□□□ 0.25
NPAS3-201ENST00000346562 KRTAP10-9P60411 292 aa16.6■□□□□ 0.25
NPAS3-201ENST00000346562 C9orf116Q5BN46 136 aaPredicted RBP16.6■□□□□ 0.25
NPAS3-201ENST00000346562 PLCE1Q9P212 2302 aa16.59■□□□□ 0.25
NPAS3-201ENST00000346562 SHANK1Q9Y566 2161 aa16.59■□□□□ 0.25
NPAS3-201ENST00000346562 FAM208BQ5VWN6 2430 aa16.59■□□□□ 0.25
NPAS3-201ENST00000346562 Q9BRP9 147 aa16.58■□□□□ 0.25
NPAS3-201ENST00000346562 CELA1Q9UNI1 258 aa16.58■□□□□ 0.25
NPAS3-201ENST00000346562 PRYO14603 147 aa16.57■□□□□ 0.24
NPAS3-201ENST00000346562 MUC6Q6W4X9 2439 aa16.57■□□□□ 0.24
NPAS3-201ENST00000346562 COX6A2Q02221 97 aa16.55■□□□□ 0.24
NPAS3-201ENST00000346562 ZNF580Q9UK33 172 aa16.55■□□□□ 0.24
NPAS3-201ENST00000346562 IGLV4-60A0A075B6I1 120 aa16.55■□□□□ 0.24
NPAS3-201ENST00000346562 C2orf48Q96LS8 159 aa16.55■□□□□ 0.24
NPAS3-201ENST00000346562 DSCAMO60469 2012 aa16.55■□□□□ 0.24
NPAS3-201ENST00000346562 LINC00208Q96KT6 92 aa16.54■□□□□ 0.24
NPAS3-201ENST00000346562 TRAV7A0A075B6U4 112 aa16.53■□□□□ 0.24
NPAS3-201ENST00000346562 CSDC2Q9Y534 153 aaKnown RBP16.53■□□□□ 0.24
NPAS3-201ENST00000346562 TNCP24821 2201 aa16.53■□□□□ 0.24
NPAS3-201ENST00000346562 PTPRQQ9UMZ3 2332 aa16.53■□□□□ 0.24
NPAS3-201ENST00000346562 MED13LQ71F56 2210 aa16.53■□□□□ 0.24
NPAS3-201ENST00000346562 LIMD2Q9BT23 127 aa16.52■□□□□ 0.24
NPAS3-201ENST00000346562 TRBV7-6A0A0J9YX20 115 aa16.51■□□□□ 0.23
NPAS3-201ENST00000346562 X6R8D5 127 aa16.51■□□□□ 0.23
NPAS3-201ENST00000346562 NHLRC4P0CG21 123 aaPredicted RBP16.51■□□□□ 0.23
NPAS3-201ENST00000346562 RETNLBQ9BQ08 111 aa16.51■□□□□ 0.23
NPAS3-201ENST00000346562 A0A087WYN8 130 aa16.5■□□□□ 0.23
NPAS3-201ENST00000346562 LINC00694P0DN24 101 aa16.49■□□□□ 0.23
NPAS3-201ENST00000346562 LYPD5Q6UWN5 251 aa16.48■□□□□ 0.23
NPAS3-201ENST00000346562 LINC01561Q8N1V8 128 aa16.47■□□□□ 0.23
NPAS3-201ENST00000346562 A0A1B0GUV1 79 aa16.46■□□□□ 0.23
NPAS3-201ENST00000346562 LINC01547P58512 204 aaPredicted RBP16.46■□□□□ 0.23
NPAS3-201ENST00000346562 CCDC179H3BU77 68 aa16.46■□□□□ 0.23
NPAS3-201ENST00000346562 BEAN1Q3B7T3 259 aa16.46■□□□□ 0.23
NPAS3-201ENST00000346562 PRR3P79522 188 aaKnown RBP16.46■□□□□ 0.22
NPAS3-201ENST00000346562 DSCAML1Q8TD84 2053 aa16.45■□□□□ 0.22
NPAS3-201ENST00000346562 AMELXQ99217 191 aa16.45■□□□□ 0.22
NPAS3-201ENST00000346562 ARHGAP21Q5T5U3 1957 aa16.45■□□□□ 0.22
NPAS3-201ENST00000346562 XGP55808 180 aa16.44■□□□□ 0.22
NPAS3-201ENST00000346562 Q6Q795 121 aa16.44■□□□□ 0.22
NPAS3-201ENST00000346562 SMIM26A0A096LP01 95 aa16.44■□□□□ 0.22
NPAS3-201ENST00000346562 KIAA1549Q9HCM3 1950 aa16.43■□□□□ 0.22
NPAS3-201ENST00000346562 FREM1Q5H8C1 2179 aa16.42■□□□□ 0.22
NPAS3-201ENST00000346562 MUC22E2RYF6 1773 aaPredicted RBP16.42■□□□□ 0.22
NPAS3-201ENST00000346562 A0A087WSZ3 146 aa16.4■□□□□ 0.22
NPAS3-201ENST00000346562 LINC00575Q6W349 94 aa16.4■□□□□ 0.22
NPAS3-201ENST00000346562 MED12LQ86YW9 2145 aa16.39■□□□□ 0.21
NPAS3-201ENST00000346562 TSPEAR-AS2P59090 65 aa16.39■□□□□ 0.21
NPAS3-201ENST00000346562 PCOTHQ58A44 107 aa16.38■□□□□ 0.21
NPAS3-201ENST00000346562 Q8N2B8 174 aa16.38■□□□□ 0.21
NPAS3-201ENST00000346562 H0Y9P7 68 aa16.38■□□□□ 0.21
NPAS3-201ENST00000346562 SPINK1P00995 79 aa16.37■□□□□ 0.21
NPAS3-201ENST00000346562 CEP192Q8TEP8 1941 aa16.36■□□□□ 0.21
NPAS3-201ENST00000346562 COX8CQ7Z4L0 72 aa16.36■□□□□ 0.21
NPAS3-201ENST00000346562 ADAMTSL4-AS1Q5T5F5 129 aa16.35■□□□□ 0.21
NPAS3-201ENST00000346562 Q6ZSN1 163 aa16.34■□□□□ 0.21
NPAS3-201ENST00000346562 TRBV7-7A0A0K0K1E9 115 aa16.34■□□□□ 0.21
NPAS3-201ENST00000346562 FHL3Q13643 280 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 328.1 ms