RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 PRB2P02812 416 aaPredicted RBP17.46■□□□□ 0.38
TRADD-201ENST00000345057 IGLV5-39A0A0G2JS06 123 aa17.45■□□□□ 0.38
TRADD-201ENST00000345057 ZFAND6Q6FIF0 208 aa17.45■□□□□ 0.38
TRADD-201ENST00000345057 NDUFA12Q9UI09 145 aa17.44■□□□□ 0.38
TRADD-201ENST00000345057 COX11Q9Y6N1 276 aa17.44■□□□□ 0.38
TRADD-201ENST00000345057 FXYD2P54710 66 aa17.44■□□□□ 0.38
TRADD-201ENST00000345057 TAX1BP3O14907 124 aa17.43■□□□□ 0.38
TRADD-201ENST00000345057 TMEM238LA0A1B0GVL6 79 aa17.42■□□□□ 0.38
TRADD-201ENST00000345057 A6NJY4 79 aa17.42■□□□□ 0.38
TRADD-201ENST00000345057 TMEM238C9JI98 176 aa17.42■□□□□ 0.38
TRADD-201ENST00000345057 SMIM1B2RUZ4 78 aa17.41■□□□□ 0.38
TRADD-201ENST00000345057 SS18Q15532 418 aa17.41■□□□□ 0.38
TRADD-201ENST00000345057 IGKV3OR2-268A0A0C4DH90 116 aa17.41■□□□□ 0.38
TRADD-201ENST00000345057 LINC00959A0A1B0GUT2 108 aa17.41■□□□□ 0.38
TRADD-201ENST00000345057 SMIM13P0DJ93 91 aa17.41■□□□□ 0.38
TRADD-201ENST00000345057 NOTCH1P46531 2555 aa17.4■□□□□ 0.38
TRADD-201ENST00000345057 A0A0J9YXY3 114 aa17.39■□□□□ 0.38
TRADD-201ENST00000345057 C10orf126Q8N4M7 172 aa17.39■□□□□ 0.38
TRADD-201ENST00000345057 DEFB131BA0A096LNP1 70 aa17.39■□□□□ 0.37
TRADD-201ENST00000345057 NANOS2P60321 138 aaKnown RBP17.39■□□□□ 0.37
TRADD-201ENST00000345057 NDUFA1O15239 70 aa17.38■□□□□ 0.37
TRADD-201ENST00000345057 LYPD5Q6UWN5 251 aa17.38■□□□□ 0.37
TRADD-201ENST00000345057 MRAPQ8TCY5 172 aa17.38■□□□□ 0.37
TRADD-201ENST00000345057 IGHV3OR16-9A0A0B4J2B5 98 aa17.37■□□□□ 0.37
TRADD-201ENST00000345057 NHP2Q9NX24 153 aaKnown RBP17.36■□□□□ 0.37
TRADD-201ENST00000345057 MGAM2Q2M2H8 2515 aa17.35■□□□□ 0.37
TRADD-201ENST00000345057 ANGP03950 147 aaKnown RBP17.35■□□□□ 0.37
TRADD-201ENST00000345057 Q6ZVH6 145 aa17.35■□□□□ 0.37
TRADD-201ENST00000345057 A0A087WZ39 114 aa17.34■□□□□ 0.37
TRADD-201ENST00000345057 TIMM17BO60830 172 aa17.34■□□□□ 0.37
TRADD-201ENST00000345057 NBEAL1Q6ZS30 2694 aa17.34■□□□□ 0.37
TRADD-201ENST00000345057 K7EP13 123 aa17.33■□□□□ 0.37
TRADD-201ENST00000345057 IGHV3-30P01768 117 aa17.33■□□□□ 0.37
TRADD-201ENST00000345057 IGHV3-30-5P0DP03 117 aa17.33■□□□□ 0.37
TRADD-201ENST00000345057 LINC00269Q8N2A0 174 aa17.33■□□□□ 0.37
TRADD-201ENST00000345057 TRAV10A0A0B4J240 114 aa17.33■□□□□ 0.36
TRADD-201ENST00000345057 LINC01561Q8N1V8 128 aa17.33■□□□□ 0.36
TRADD-201ENST00000345057 C9orf118A6NHY6 69 aa17.32■□□□□ 0.36
TRADD-201ENST00000345057 HERV-K104P63124 156 aa17.32■□□□□ 0.36
TRADD-201ENST00000345057 CIRBPQ14011 172 aaKnown RBP17.32■□□□□ 0.36
TRADD-201ENST00000345057 A0A1B0GWB2 263 aa17.31■□□□□ 0.36
TRADD-201ENST00000345057 REG3AQ06141 175 aa17.31■□□□□ 0.36
TRADD-201ENST00000345057 SPANXDQ9BXN6 97 aa17.3■□□□□ 0.36
TRADD-201ENST00000345057 Q9H8V8 135 aa17.3■□□□□ 0.36
TRADD-201ENST00000345057 SPANXCQ9NY87 97 aa17.3■□□□□ 0.36
TRADD-201ENST00000345057 RPL24P83731 157 aaKnown RBP17.29■□□□□ 0.36
TRADD-201ENST00000345057 SFTA2Q6UW10 78 aa17.29■□□□□ 0.36
TRADD-201ENST00000345057 COX7B2Q8TF08 81 aa17.29■□□□□ 0.36
TRADD-201ENST00000345057 RAB37Q96AX2 223 aa17.29■□□□□ 0.36
TRADD-201ENST00000345057 XCL1P47992 114 aa17.28■□□□□ 0.36
TRADD-201ENST00000345057 CLPSL2Q6UWE3 100 aa17.28■□□□□ 0.36
TRADD-201ENST00000345057 CD164L2Q6UWJ8 174 aa17.27■□□□□ 0.36
TRADD-201ENST00000345057 C15orf53Q8NAA6 179 aa17.27■□□□□ 0.36
TRADD-201ENST00000345057 ZNF625Q96I27 306 aaPredicted RBP17.27■□□□□ 0.36
TRADD-201ENST00000345057 LITAFQ99732 161 aa17.27■□□□□ 0.36
TRADD-201ENST00000345057 VAMP3Q15836 100 aa17.27■□□□□ 0.35
TRADD-201ENST00000345057 C5orf38Q86SI9 138 aa17.26■□□□□ 0.35
TRADD-201ENST00000345057 MIAQ16674 131 aa17.25■□□□□ 0.35
TRADD-201ENST00000345057 K7ERJ3 54 aa17.24■□□□□ 0.35
TRADD-201ENST00000345057 CHCHD10Q8WYQ3 142 aaPredicted RBP17.24■□□□□ 0.35
TRADD-201ENST00000345057 PRR34Q9NV39 138 aa17.24■□□□□ 0.35
TRADD-201ENST00000345057 COPS9Q8WXC6 57 aa17.24■□□□□ 0.35
TRADD-201ENST00000345057 TENM3Q9P273 2699 aa17.24■□□□□ 0.35
TRADD-201ENST00000345057 H3BUT2 72 aa17.23■□□□□ 0.35
TRADD-201ENST00000345057 IFITM1P13164 125 aa17.23■□□□□ 0.35
TRADD-201ENST00000345057 MUSTN1Q8IVN3 82 aa17.22■□□□□ 0.35
TRADD-201ENST00000345057 Q8N3U1 123 aa17.22■□□□□ 0.35
TRADD-201ENST00000345057 TOMM7Q9P0U1 55 aa17.22■□□□□ 0.35
TRADD-201ENST00000345057 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.22■□□□□ 0.35
TRADD-201ENST00000345057 COX7A2LO14548 114 aa17.22■□□□□ 0.35
TRADD-201ENST00000345057 B9D2Q9BPU9 175 aa17.22■□□□□ 0.35
TRADD-201ENST00000345057 PRSS2P07478 247 aa17.21■□□□□ 0.35
TRADD-201ENST00000345057 CRPP02741 224 aa17.2■□□□□ 0.34
TRADD-201ENST00000345057 ESRGQ1W209 222 aa17.2■□□□□ 0.34
TRADD-201ENST00000345057 KLK12Q9UKR0 248 aa17.2■□□□□ 0.34
TRADD-201ENST00000345057 MEIG1Q5JSS6 88 aa17.2■□□□□ 0.34
TRADD-201ENST00000345057 TRAV8-4A0A0B4J246 113 aa17.19■□□□□ 0.34
TRADD-201ENST00000345057 UBE2V1Q13404 147 aa17.19■□□□□ 0.34
TRADD-201ENST00000345057 ADAMTSL4-AS1Q5T5F5 129 aa17.19■□□□□ 0.34
TRADD-201ENST00000345057 A0A1W2PPM0 123 aa17.18■□□□□ 0.34
TRADD-201ENST00000345057 A4D1N5 150 aa17.18■□□□□ 0.34
TRADD-201ENST00000345057 Q8IZM0 81 aa17.18■□□□□ 0.34
TRADD-201ENST00000345057 FABP2P12104 132 aa17.18■□□□□ 0.34
TRADD-201ENST00000345057 WFDC10BQ8IUB3 73 aa17.18■□□□□ 0.34
TRADD-201ENST00000345057 IGLL5B9A064 214 aa17.17■□□□□ 0.34
TRADD-201ENST00000345057 APOMO95445 188 aa17.17■□□□□ 0.34
TRADD-201ENST00000345057 MALP21145 153 aa17.17■□□□□ 0.34
TRADD-201ENST00000345057 C6orf226Q5I0X4 101 aa17.17■□□□□ 0.34
TRADD-201ENST00000345057 IGLV10-54A0A075B6I4 117 aa17.16■□□□□ 0.34
TRADD-201ENST00000345057 IGHV3-33P01772 117 aa17.16■□□□□ 0.34
TRADD-201ENST00000345057 A0A0B4J2C4 111 aa17.16■□□□□ 0.34
TRADD-201ENST00000345057 CFC1BP0CG36 223 aa17.16■□□□□ 0.34
TRADD-201ENST00000345057 CFC1P0CG37 223 aa17.16■□□□□ 0.34
TRADD-201ENST00000345057 GTF2H5Q6ZYL4 71 aa17.16■□□□□ 0.34
TRADD-201ENST00000345057 HUWE1Q7Z6Z7 4374 aaKnown RBP17.15■□□□□ 0.34
TRADD-201ENST00000345057 PPDPFQ9H3Y8 114 aa17.14■□□□□ 0.33
TRADD-201ENST00000345057 FOXI1Q12951 378 aa17.14■□□□□ 0.33
TRADD-201ENST00000345057 LINC01556Q5JQF7 62 aa17.14■□□□□ 0.33
TRADD-201ENST00000345057 ENHOQ6UWT2 76 aa17.14■□□□□ 0.33
TRADD-201ENST00000345057 PRO1854Q9UHT4 67 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms