RNA–Protein interactions for RNA: ENST00000344979.7

PDE4A-202, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best) BASIC

Gene PDE4A, Length 2,579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-202ENST00000344979 ANK3Q12955 4377 aaKnown RBP13.01□□□□□ -0.33
PDE4A-202ENST00000344979 M0QXV9 152 aa13.01□□□□□ -0.33
PDE4A-202ENST00000344979 TEX29Q8N6K0 151 aa13.01□□□□□ -0.33
PDE4A-202ENST00000344979 NBEAL2Q6ZNJ1 2754 aa13.01□□□□□ -0.33
PDE4A-202ENST00000344979 TMEM262E9PQX1 116 aa13.01□□□□□ -0.33
PDE4A-202ENST00000344979 PDZD2O15018 2839 aa13.01□□□□□ -0.33
PDE4A-202ENST00000344979 TMEM243Q9BU79 118 aa13□□□□□ -0.33
PDE4A-202ENST00000344979 GCN1Q92616 2671 aaKnown RBP13□□□□□ -0.33
PDE4A-202ENST00000344979 CSDC2Q9Y534 153 aaKnown RBP13□□□□□ -0.33
PDE4A-202ENST00000344979 TRGV4A0A0C4DH28 118 aa12.99□□□□□ -0.33
PDE4A-202ENST00000344979 PLAC8L1A1L4L8 177 aa12.99□□□□□ -0.33
PDE4A-202ENST00000344979 CFAP161Q6P656 301 aa12.99□□□□□ -0.33
PDE4A-202ENST00000344979 UBE2WQ96B02 151 aa12.99□□□□□ -0.33
PDE4A-202ENST00000344979 FN1P02751 2386 aaKnown RBP12.99□□□□□ -0.33
PDE4A-202ENST00000344979 SOSTDC1Q6X4U4 206 aa12.99□□□□□ -0.33
PDE4A-202ENST00000344979 RNF183Q96D59 192 aa12.99□□□□□ -0.33
PDE4A-202ENST00000344979 C16orf74Q96GX8 76 aa12.99□□□□□ -0.33
PDE4A-202ENST00000344979 GAGE6Q13070 117 aa12.98□□□□□ -0.33
PDE4A-202ENST00000344979 F5H768 121 aa12.97□□□□□ -0.33
PDE4A-202ENST00000344979 LST1O00453 97 aa12.97□□□□□ -0.33
PDE4A-202ENST00000344979 TRAV8-4A0A0B4J246 113 aa12.95□□□□□ -0.34
PDE4A-202ENST00000344979 IGLV1-51P01701 117 aa12.95□□□□□ -0.34
PDE4A-202ENST00000344979 FAM19A3Q7Z5A8 133 aa12.95□□□□□ -0.34
PDE4A-202ENST00000344979 TOMM7Q9P0U1 55 aa12.95□□□□□ -0.34
PDE4A-202ENST00000344979 C19orf73Q9NVV2 129 aa12.95□□□□□ -0.34
PDE4A-202ENST00000344979 KRTAP1-1Q07627 177 aa12.94□□□□□ -0.34
PDE4A-202ENST00000344979 RNASE1P07998 156 aaKnown RBP12.93□□□□□ -0.34
PDE4A-202ENST00000344979 CMC4P56277 68 aaPredicted RBP12.93□□□□□ -0.34
PDE4A-202ENST00000344979 CSNK1G2-AS1Q8NCQ2 148 aa12.93□□□□□ -0.34
PDE4A-202ENST00000344979 HELZ2Q9BYK8 2649 aaKnown RBP12.92□□□□□ -0.34
PDE4A-202ENST00000344979 H3BT86 120 aa12.92□□□□□ -0.34
PDE4A-202ENST00000344979 DEFB130BP0DP73 79 aa12.92□□□□□ -0.34
PDE4A-202ENST00000344979 DEFB130AP0DP74 79 aa12.92□□□□□ -0.34
PDE4A-202ENST00000344979 CHCHD5Q9BSY4 110 aa12.92□□□□□ -0.34
PDE4A-202ENST00000344979 TRBV6-4A0A1B0GX49 114 aa12.92□□□□□ -0.34
PDE4A-202ENST00000344979 CRLF1O75462 422 aa12.92□□□□□ -0.34
PDE4A-202ENST00000344979 IGLV4-60A0A075B6I1 120 aa12.91□□□□□ -0.34
PDE4A-202ENST00000344979 SNCGO76070 127 aa12.91□□□□□ -0.34
PDE4A-202ENST00000344979 VWFP04275 2813 aa12.91□□□□□ -0.34
PDE4A-202ENST00000344979 UNC79Q9P2D8 2635 aa12.91□□□□□ -0.34
PDE4A-202ENST00000344979 COPS9Q8WXC6 57 aa12.9□□□□□ -0.34
PDE4A-202ENST00000344979 C16orf95Q9H693 158 aa12.9□□□□□ -0.34
PDE4A-202ENST00000344979 HERV-K104P63124 156 aa12.89□□□□□ -0.35
PDE4A-202ENST00000344979 FHL2Q14192 279 aa12.89□□□□□ -0.35
PDE4A-202ENST00000344979 LINC01600Q96MT4 127 aa12.89□□□□□ -0.35
PDE4A-202ENST00000344979 COX7B2Q8TF08 81 aa12.89□□□□□ -0.35
PDE4A-202ENST00000344979 OVOL2Q9BRP0 275 aa12.89□□□□□ -0.35
PDE4A-202ENST00000344979 TRBV6-8A0A0A6YYG3 113 aa12.88□□□□□ -0.35
PDE4A-202ENST00000344979 FASNP49327 2511 aaKnown RBP12.88□□□□□ -0.35
PDE4A-202ENST00000344979 COX7A2LO14548 114 aa12.87□□□□□ -0.35
PDE4A-202ENST00000344979 CITED1Q99966 193 aa12.87□□□□□ -0.35
PDE4A-202ENST00000344979 HIVEP2P31629 2446 aa12.87□□□□□ -0.35
PDE4A-202ENST00000344979 MIR7-3HGQ8N6C7 128 aa12.87□□□□□ -0.35
PDE4A-202ENST00000344979 C15orf53Q8NAA6 179 aa12.86□□□□□ -0.35
PDE4A-202ENST00000344979 NOTCH2Q04721 2471 aa12.86□□□□□ -0.35
PDE4A-202ENST00000344979 GAGE2BQ13066 116 aa12.86□□□□□ -0.35
PDE4A-202ENST00000344979 GAGE2EQ4V326 116 aa12.86□□□□□ -0.35
PDE4A-202ENST00000344979 SHISA2Q6UWI4 295 aa12.86□□□□□ -0.35
PDE4A-202ENST00000344979 C5orf38Q86SI9 138 aa12.86□□□□□ -0.35
PDE4A-202ENST00000344979 GAGE2DQ9UEU5 116 aa12.86□□□□□ -0.35
PDE4A-202ENST00000344979 SMR3AQ99954 134 aa12.85□□□□□ -0.35
PDE4A-202ENST00000344979 FAM110AQ9BQ89 295 aa12.85□□□□□ -0.35
PDE4A-202ENST00000344979 ANAPC13Q9BS18 74 aa12.85□□□□□ -0.35
PDE4A-202ENST00000344979 LINC00158P58513 81 aa12.85□□□□□ -0.35
PDE4A-202ENST00000344979 TTC32Q5I0X7 151 aa12.85□□□□□ -0.35
PDE4A-202ENST00000344979 C11orf68Q9H3H3 251 aaKnown RBP12.85□□□□□ -0.35
PDE4A-202ENST00000344979 SS18L2Q9UHA2 77 aa12.84□□□□□ -0.35
PDE4A-202ENST00000344979 A0A096LPF7 62 aa12.83□□□□□ -0.36
PDE4A-202ENST00000344979 PF4P02776 101 aa12.83□□□□□ -0.36
PDE4A-202ENST00000344979 PFN2P35080 140 aa12.82□□□□□ -0.36
PDE4A-202ENST00000344979 HILS1P60008 231 aa12.82□□□□□ -0.36
PDE4A-202ENST00000344979 FAM218AQ96MZ4 157 aa12.82□□□□□ -0.36
PDE4A-202ENST00000344979 SND1-IT1Q9HBX3 110 aa12.82□□□□□ -0.36
PDE4A-202ENST00000344979 GYPEP15421 78 aa12.81□□□□□ -0.36
PDE4A-202ENST00000344979 IGHV3OR16-9A0A0B4J2B5 98 aa12.81□□□□□ -0.36
PDE4A-202ENST00000344979 CRPP02741 224 aa12.81□□□□□ -0.36
PDE4A-202ENST00000344979 CLPSL2Q6UWE3 100 aa12.81□□□□□ -0.36
PDE4A-202ENST00000344979 LINC00337Q8N6G1 96 aa12.8□□□□□ -0.36
PDE4A-202ENST00000344979 KRTAP10-3P60369 221 aa12.8□□□□□ -0.36
PDE4A-202ENST00000344979 XCL1P47992 114 aa12.79□□□□□ -0.36
PDE4A-202ENST00000344979 Q9HAA7 133 aa12.79□□□□□ -0.36
PDE4A-202ENST00000344979 HECTD1Q9ULT8 2610 aa12.79□□□□□ -0.36
PDE4A-202ENST00000344979 TRAV13-2A0A0B4J235 113 aa12.78□□□□□ -0.36
PDE4A-202ENST00000344979 BAALC-AS2P0C853 105 aa12.78□□□□□ -0.36
PDE4A-202ENST00000344979 IGKV2-28A0A075B6P5 120 aa12.78□□□□□ -0.36
PDE4A-202ENST00000344979 IGKV2D-28P01615 120 aa12.78□□□□□ -0.36
PDE4A-202ENST00000344979 A0A087WZ39 114 aa12.77□□□□□ -0.37
PDE4A-202ENST00000344979 LINC00959A0A1B0GUT2 108 aa12.77□□□□□ -0.37
PDE4A-202ENST00000344979 DEFB121Q5J5C9 76 aa12.77□□□□□ -0.37
PDE4A-202ENST00000344979 CCL18P55774 89 aa12.76□□□□□ -0.37
PDE4A-202ENST00000344979 DEFB4AO15263 64 aa12.76□□□□□ -0.37
PDE4A-202ENST00000344979 NDUFV3P56181 108 aaKnown RBP12.76□□□□□ -0.37
PDE4A-202ENST00000344979 C6orf226Q5I0X4 101 aa12.76□□□□□ -0.37
PDE4A-202ENST00000344979 TENM1Q9UKZ4 2725 aa12.76□□□□□ -0.37
PDE4A-202ENST00000344979 TRACP01848 142 aa12.76□□□□□ -0.37
PDE4A-202ENST00000344979 LINC00482Q8N8I6 264 aa12.76□□□□□ -0.37
PDE4A-202ENST00000344979 PAX4O43316 350 aa12.74□□□□□ -0.37
PDE4A-202ENST00000344979 RPL28P46779 137 aaKnown RBP12.74□□□□□ -0.37
PDE4A-202ENST00000344979 KIR2DL5BQ8NHK3 375 aa12.74□□□□□ -0.37
PDE4A-202ENST00000344979 SPATA3Q8NHX4 192 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms