RNA–Protein interactions for RNA: ENST00000341990.8

CNTNAP3B-202, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-202ENST00000341990 GAGE2BQ13066 116 aa14.16□□□□□ -0.14
CNTNAP3B-202ENST00000341990 GAGE2EQ4V326 116 aa14.16□□□□□ -0.14
CNTNAP3B-202ENST00000341990 C15orf53Q8NAA6 179 aa14.16□□□□□ -0.14
CNTNAP3B-202ENST00000341990 WFDC11Q8NEX6 87 aa14.16□□□□□ -0.14
CNTNAP3B-202ENST00000341990 GAGE2DQ9UEU5 116 aa14.16□□□□□ -0.14
CNTNAP3B-202ENST00000341990 GAGE7O76087 117 aa14.15□□□□□ -0.14
CNTNAP3B-202ENST00000341990 GAGE12FP0CL80 117 aa14.15□□□□□ -0.14
CNTNAP3B-202ENST00000341990 GAGE12GP0CL81 117 aa14.15□□□□□ -0.14
CNTNAP3B-202ENST00000341990 GAGE12IP0CL82 117 aa14.15□□□□□ -0.14
CNTNAP3B-202ENST00000341990 FAM19A3Q7Z5A8 133 aa14.15□□□□□ -0.14
CNTNAP3B-202ENST00000341990 ZNF843Q8N446 348 aa14.15□□□□□ -0.14
CNTNAP3B-202ENST00000341990 RPL35AP18077 110 aaKnown RBP14.14□□□□□ -0.15
CNTNAP3B-202ENST00000341990 PLAC8L1A1L4L8 177 aa14.14□□□□□ -0.15
CNTNAP3B-202ENST00000341990 NHLRC4P0CG21 123 aaPredicted RBP14.14□□□□□ -0.15
CNTNAP3B-202ENST00000341990 TTC32Q5I0X7 151 aa14.14□□□□□ -0.15
CNTNAP3B-202ENST00000341990 IGKV3OR2-268A0A0C4DH90 116 aa14.13□□□□□ -0.15
CNTNAP3B-202ENST00000341990 LRRC75A-AS1Q8N1F1 130 aa14.13□□□□□ -0.15
CNTNAP3B-202ENST00000341990 TENM4Q6N022 2769 aa14.12□□□□□ -0.15
CNTNAP3B-202ENST00000341990 NBEAL2Q6ZNJ1 2754 aa14.12□□□□□ -0.15
CNTNAP3B-202ENST00000341990 TRGV2A0A075B6R0 118 aa14.12□□□□□ -0.15
CNTNAP3B-202ENST00000341990 GCN1Q92616 2671 aaKnown RBP14.12□□□□□ -0.15
CNTNAP3B-202ENST00000341990 UBE2L6O14933 153 aa14.12□□□□□ -0.15
CNTNAP3B-202ENST00000341990 TMEM243Q9BU79 118 aa14.11□□□□□ -0.15
CNTNAP3B-202ENST00000341990 TMEM86BQ8N661 226 aa14.11□□□□□ -0.15
CNTNAP3B-202ENST00000341990 COX7A2LO14548 114 aa14.1□□□□□ -0.15
CNTNAP3B-202ENST00000341990 SHISA2Q6UWI4 295 aa14.1□□□□□ -0.15
CNTNAP3B-202ENST00000341990 ITPR2Q14571 2701 aa14.09□□□□□ -0.15
CNTNAP3B-202ENST00000341990 NDUFV3P56181 108 aaKnown RBP14.09□□□□□ -0.15
CNTNAP3B-202ENST00000341990 GAGE6Q13070 117 aa14.08□□□□□ -0.15
CNTNAP3B-202ENST00000341990 HIST2H2BCQ6DN03 193 aa14.08□□□□□ -0.16
CNTNAP3B-202ENST00000341990 FAM218AQ96MZ4 157 aa14.08□□□□□ -0.16
CNTNAP3B-202ENST00000341990 TOMM7Q9P0U1 55 aa14.08□□□□□ -0.16
CNTNAP3B-202ENST00000341990 DEFB121Q5J5C9 76 aa14.07□□□□□ -0.16
CNTNAP3B-202ENST00000341990 IGLV4-60A0A075B6I1 120 aa14.07□□□□□ -0.16
CNTNAP3B-202ENST00000341990 LINC01006Q8NI28 216 aa14.05□□□□□ -0.16
CNTNAP3B-202ENST00000341990 C16orf74Q96GX8 76 aa14.05□□□□□ -0.16
CNTNAP3B-202ENST00000341990 C19orf73Q9NVV2 129 aa14.05□□□□□ -0.16
CNTNAP3B-202ENST00000341990 TRGV4A0A0C4DH28 118 aa14.05□□□□□ -0.16
CNTNAP3B-202ENST00000341990 HERV-K104P63124 156 aa14.05□□□□□ -0.16
CNTNAP3B-202ENST00000341990 MIR7-3HGQ8N6C7 128 aa14.04□□□□□ -0.16
CNTNAP3B-202ENST00000341990 COPS9Q8WXC6 57 aa14.04□□□□□ -0.16
CNTNAP3B-202ENST00000341990 CSNK1G2-AS1Q8NCQ2 148 aa14.03□□□□□ -0.16
CNTNAP3B-202ENST00000341990 PDZD2O15018 2839 aa14.03□□□□□ -0.16
CNTNAP3B-202ENST00000341990 COX7B2Q8TF08 81 aa14.03□□□□□ -0.16
CNTNAP3B-202ENST00000341990 FAM240AA0A1B0GVK7 77 aa14.02□□□□□ -0.16
CNTNAP3B-202ENST00000341990 TRBV6-4A0A1B0GX49 114 aa14.02□□□□□ -0.17
CNTNAP3B-202ENST00000341990 LINC00337Q8N6G1 96 aa14.02□□□□□ -0.17
CNTNAP3B-202ENST00000341990 Q6Q795 121 aa14.01□□□□□ -0.17
CNTNAP3B-202ENST00000341990 C22orf24Q9Y442 160 aa14.01□□□□□ -0.17
CNTNAP3B-202ENST00000341990 VWFP04275 2813 aa14.01□□□□□ -0.17
CNTNAP3B-202ENST00000341990 IGKV2-28A0A075B6P5 120 aa14□□□□□ -0.17
CNTNAP3B-202ENST00000341990 B5MCH6 92 aa14□□□□□ -0.17
CNTNAP3B-202ENST00000341990 IGKV2D-28P01615 120 aa14□□□□□ -0.17
CNTNAP3B-202ENST00000341990 CHCHD5Q9BSY4 110 aa14□□□□□ -0.17
CNTNAP3B-202ENST00000341990 Q9HAA7 133 aa14□□□□□ -0.17
CNTNAP3B-202ENST00000341990 IGLV1-51P01701 117 aa14□□□□□ -0.17
CNTNAP3B-202ENST00000341990 FHL2Q14192 279 aa14□□□□□ -0.17
CNTNAP3B-202ENST00000341990 CCDC179H3BU77 68 aa13.99□□□□□ -0.17
CNTNAP3B-202ENST00000341990 ANK3Q12955 4377 aaKnown RBP13.99□□□□□ -0.17
CNTNAP3B-202ENST00000341990 TRBV6-8A0A0A6YYG3 113 aa13.99□□□□□ -0.17
CNTNAP3B-202ENST00000341990 BAALC-AS2P0C853 105 aa13.99□□□□□ -0.17
CNTNAP3B-202ENST00000341990 OVOL2Q9BRP0 275 aa13.98□□□□□ -0.17
CNTNAP3B-202ENST00000341990 C5orf38Q86SI9 138 aa13.98□□□□□ -0.17
CNTNAP3B-202ENST00000341990 SND1-IT1Q9HBX3 110 aa13.98□□□□□ -0.17
CNTNAP3B-202ENST00000341990 SS18L2Q9UHA2 77 aa13.98□□□□□ -0.17
CNTNAP3B-202ENST00000341990 IGHV3OR16-9A0A0B4J2B5 98 aa13.98□□□□□ -0.17
CNTNAP3B-202ENST00000341990 LINC00158P58513 81 aa13.98□□□□□ -0.17
CNTNAP3B-202ENST00000341990 TRACP01848 142 aa13.97□□□□□ -0.17
CNTNAP3B-202ENST00000341990 CRPP02741 224 aa13.97□□□□□ -0.17
CNTNAP3B-202ENST00000341990 DEFB130BP0DP73 79 aa13.97□□□□□ -0.17
CNTNAP3B-202ENST00000341990 DEFB130AP0DP74 79 aa13.97□□□□□ -0.17
CNTNAP3B-202ENST00000341990 SMCR5Q8TEV8 140 aa13.97□□□□□ -0.17
CNTNAP3B-202ENST00000341990 C11orf68Q9H3H3 251 aaKnown RBP13.96□□□□□ -0.18
CNTNAP3B-202ENST00000341990 PFN2P35080 140 aa13.95□□□□□ -0.18
CNTNAP3B-202ENST00000341990 KRTAP1-1Q07627 177 aa13.95□□□□□ -0.18
CNTNAP3B-202ENST00000341990 MRPL23Q16540 153 aaKnown RBP13.95□□□□□ -0.18
CNTNAP3B-202ENST00000341990 TRAV13-2A0A0B4J235 113 aa13.94□□□□□ -0.18
CNTNAP3B-202ENST00000341990 CCL18P55774 89 aa13.94□□□□□ -0.18
CNTNAP3B-202ENST00000341990 RPL28P46779 137 aaKnown RBP13.94□□□□□ -0.18
CNTNAP3B-202ENST00000341990 HIVEP2P31629 2446 aa13.93□□□□□ -0.18
CNTNAP3B-202ENST00000341990 CMC4P56277 68 aaPredicted RBP13.93□□□□□ -0.18
CNTNAP3B-202ENST00000341990 SMIM11BQ8TCY0 68 aa13.93□□□□□ -0.18
CNTNAP3B-202ENST00000341990 A0A087WYN8 130 aa13.92□□□□□ -0.18
CNTNAP3B-202ENST00000341990 A0A087WZ39 114 aa13.91□□□□□ -0.18
CNTNAP3B-202ENST00000341990 RNASE1P07998 156 aaKnown RBP13.91□□□□□ -0.18
CNTNAP3B-202ENST00000341990 FAM110AQ9BQ89 295 aa13.9□□□□□ -0.18
CNTNAP3B-202ENST00000341990 TRBV7-7A0A0K0K1E9 115 aa13.9□□□□□ -0.18
CNTNAP3B-202ENST00000341990 FAM222AQ5U5X8 452 aa13.9□□□□□ -0.18
CNTNAP3B-202ENST00000341990 CLPSL2Q6UWE3 100 aa13.9□□□□□ -0.18
CNTNAP3B-202ENST00000341990 PPDPFQ9H3Y8 114 aa13.9□□□□□ -0.18
CNTNAP3B-202ENST00000341990 PF4P02776 101 aa13.89□□□□□ -0.19
CNTNAP3B-202ENST00000341990 C9orf129Q5T035 196 aaKnown RBP13.89□□□□□ -0.19
CNTNAP3B-202ENST00000341990 C16orf95Q9H693 158 aa13.89□□□□□ -0.19
CNTNAP3B-202ENST00000341990 LINC00959A0A1B0GUT2 108 aa13.89□□□□□ -0.19
CNTNAP3B-202ENST00000341990 XCL1P47992 114 aa13.89□□□□□ -0.19
CNTNAP3B-202ENST00000341990 A0A096LPF7 62 aa13.88□□□□□ -0.19
CNTNAP3B-202ENST00000341990 ATP5G1P05496 136 aa13.88□□□□□ -0.19
CNTNAP3B-202ENST00000341990 ACYP1P07311 99 aa13.87□□□□□ -0.19
CNTNAP3B-202ENST00000341990 MALP21145 153 aa13.87□□□□□ -0.19
CNTNAP3B-202ENST00000341990 GYPEP15421 78 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms