RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 ERASQ7Z444 233 aa10.01□□□□□ -0.81
TNFRSF12A-202ENST00000341627 C9orf163Q8N9P6 203 aa10.01□□□□□ -0.81
TNFRSF12A-202ENST00000341627 SCGB3A1Q96QR1 104 aa10.01□□□□□ -0.81
TNFRSF12A-202ENST00000341627 APOMO95445 188 aa10□□□□□ -0.81
TNFRSF12A-202ENST00000341627 LINC00614P0C842 121 aa10□□□□□ -0.81
TNFRSF12A-202ENST00000341627 C5orf38Q86SI9 138 aa9.99□□□□□ -0.81
TNFRSF12A-202ENST00000341627 AMELXQ99217 191 aa9.99□□□□□ -0.81
TNFRSF12A-202ENST00000341627 IGHV3OR16-9A0A0B4J2B5 98 aa9.98□□□□□ -0.81
TNFRSF12A-202ENST00000341627 ZNF561-AS1K7EIQ3 104 aa9.98□□□□□ -0.81
TNFRSF12A-202ENST00000341627 UBE2D1P51668 147 aa9.98□□□□□ -0.81
TNFRSF12A-202ENST00000341627 SLPIP03973 132 aa9.97□□□□□ -0.81
TNFRSF12A-202ENST00000341627 LINC00242Q5T6M2 205 aa9.97□□□□□ -0.81
TNFRSF12A-202ENST00000341627 Q6ZSA8 131 aa9.97□□□□□ -0.81
TNFRSF12A-202ENST00000341627 LINC00173Q6ZV60 143 aa9.97□□□□□ -0.81
TNFRSF12A-202ENST00000341627 FAM30AQ9NZY2 134 aa9.97□□□□□ -0.81
TNFRSF12A-202ENST00000341627 IGHV3-64A0A075B6Q5 118 aa9.96□□□□□ -0.82
TNFRSF12A-202ENST00000341627 TRGC2P03986 189 aa9.96□□□□□ -0.82
TNFRSF12A-202ENST00000341627 SEC11AP67812 179 aa9.96□□□□□ -0.82
TNFRSF12A-202ENST00000341627 ZC2HC1BQ5TFG8 222 aa9.96□□□□□ -0.82
TNFRSF12A-202ENST00000341627 URB1-AS1Q96HZ7 61 aa9.96□□□□□ -0.82
TNFRSF12A-202ENST00000341627 COLCA2A8K830 154 aa9.95□□□□□ -0.82
TNFRSF12A-202ENST00000341627 HBDP02042 147 aa9.95□□□□□ -0.82
TNFRSF12A-202ENST00000341627 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.94□□□□□ -0.82
TNFRSF12A-202ENST00000341627 OR10D4PQ8NGN7 298 aa9.94□□□□□ -0.82
TNFRSF12A-202ENST00000341627 CHCHD1Q96BP2 118 aaKnown RBP9.94□□□□□ -0.82
TNFRSF12A-202ENST00000341627 LINC00526Q96FQ7 95 aa9.94□□□□□ -0.82
TNFRSF12A-202ENST00000341627 IGLV4-69A0A075B6H9 119 aa9.93□□□□□ -0.82
TNFRSF12A-202ENST00000341627 A0A087WZ39 114 aa9.93□□□□□ -0.82
TNFRSF12A-202ENST00000341627 HAMPP81172 84 aa9.93□□□□□ -0.82
TNFRSF12A-202ENST00000341627 COX6A2Q02221 97 aa9.93□□□□□ -0.82
TNFRSF12A-202ENST00000341627 SPAG11BQ08648 103 aa9.93□□□□□ -0.82
TNFRSF12A-202ENST00000341627 SYCNQ0VAF6 134 aa9.93□□□□□ -0.82
TNFRSF12A-202ENST00000341627 SDIM1Q6ZPB5 146 aa9.93□□□□□ -0.82
TNFRSF12A-202ENST00000341627 FAM19A3Q7Z5A8 133 aa9.93□□□□□ -0.82
TNFRSF12A-202ENST00000341627 BAGE3Q86Y29 109 aa9.93□□□□□ -0.82
TNFRSF12A-202ENST00000341627 ORAOV1Q8WV07 137 aa9.93□□□□□ -0.82
TNFRSF12A-202ENST00000341627 CARD19Q96LW7 228 aa9.93□□□□□ -0.82
TNFRSF12A-202ENST00000341627 GEMIN7Q9H840 131 aaKnown RBP9.93□□□□□ -0.82
TNFRSF12A-202ENST00000341627 PKIGQ9Y2B9 76 aa9.93□□□□□ -0.82
TNFRSF12A-202ENST00000341627 A0A096LNJ9 63 aa9.92□□□□□ -0.82
TNFRSF12A-202ENST00000341627 HERVK_113P63121 156 aa9.92□□□□□ -0.82
TNFRSF12A-202ENST00000341627 PMVKQ15126 192 aa9.92□□□□□ -0.82
TNFRSF12A-202ENST00000341627 LINC01561Q8N1V8 128 aa9.92□□□□□ -0.82
TNFRSF12A-202ENST00000341627 C2orf48Q96LS8 159 aa9.92□□□□□ -0.82
TNFRSF12A-202ENST00000341627 CHAC1Q9BUX1 264 aa9.92□□□□□ -0.82
TNFRSF12A-202ENST00000341627 EPM2AB3EWF7 344 aa9.91□□□□□ -0.82
TNFRSF12A-202ENST00000341627 SCO1O75880 301 aa9.91□□□□□ -0.82
TNFRSF12A-202ENST00000341627 ATP5LO75964 103 aa9.91□□□□□ -0.82
TNFRSF12A-202ENST00000341627 PMCHL1Q16048 86 aa9.91□□□□□ -0.82
TNFRSF12A-202ENST00000341627 CAMK2N2Q96S95 79 aa9.91□□□□□ -0.82
TNFRSF12A-202ENST00000341627 CST9LQ9H4G1 147 aa9.91□□□□□ -0.82
TNFRSF12A-202ENST00000341627 F8WDY8 70 aa9.9□□□□□ -0.82
TNFRSF12A-202ENST00000341627 SCXQ7RTU7 201 aa9.9□□□□□ -0.82
TNFRSF12A-202ENST00000341627 VPS13BQ7Z7G8 4022 aa9.9□□□□□ -0.82
TNFRSF12A-202ENST00000341627 A0A0J9YXV3 536 aa9.89□□□□□ -0.83
TNFRSF12A-202ENST00000341627 HSBP1O75506 76 aa9.89□□□□□ -0.83
TNFRSF12A-202ENST00000341627 SMR3BP02814 79 aaPredicted RBP9.89□□□□□ -0.83
TNFRSF12A-202ENST00000341627 PDZD11Q5EBL8 140 aa9.89□□□□□ -0.83
TNFRSF12A-202ENST00000341627 TINCRA0A1B0GVN0 87 aa9.88□□□□□ -0.83
TNFRSF12A-202ENST00000341627 NDUFA6P56556 154 aa9.88□□□□□ -0.83
TNFRSF12A-202ENST00000341627 Q5VSD8 79 aa9.88□□□□□ -0.83
TNFRSF12A-202ENST00000341627 Q6ZRU5 148 aa9.88□□□□□ -0.83
TNFRSF12A-202ENST00000341627 CIRBP-AS1Q8TBR5 109 aa9.88□□□□□ -0.83
TNFRSF12A-202ENST00000341627 PACRGQ96M98 296 aaPredicted RBP9.88□□□□□ -0.83
TNFRSF12A-202ENST00000341627 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.88□□□□□ -0.83
TNFRSF12A-202ENST00000341627 NDUFA1O15239 70 aa9.87□□□□□ -0.83
TNFRSF12A-202ENST00000341627 LINC00469Q8N7U9 141 aa9.87□□□□□ -0.83
TNFRSF12A-202ENST00000341627 DPH3Q96FX2 82 aa9.87□□□□□ -0.83
TNFRSF12A-202ENST00000341627 CDKN2A-AS1Q9UH64 79 aa9.87□□□□□ -0.83
TNFRSF12A-202ENST00000341627 FAM229AH3BQW9 127 aa9.86□□□□□ -0.83
TNFRSF12A-202ENST00000341627 PRSS2P07478 247 aa9.86□□□□□ -0.83
TNFRSF12A-202ENST00000341627 SRRM2Q9UQ35 2752 aaKnown RBP9.86□□□□□ -0.83
TNFRSF12A-202ENST00000341627 S100A1P23297 94 aa9.85□□□□□ -0.83
TNFRSF12A-202ENST00000341627 CIRBPQ14011 172 aaKnown RBP9.85□□□□□ -0.83
TNFRSF12A-202ENST00000341627 RNF151Q2KHN1 245 aa9.85□□□□□ -0.83
TNFRSF12A-202ENST00000341627 MRPL35Q9NZE8 188 aaKnown RBP9.85□□□□□ -0.83
TNFRSF12A-202ENST00000341627 LINC00474Q9P2X8 69 aa9.85□□□□□ -0.83
TNFRSF12A-202ENST00000341627 IGLV5-45A0A087WSX0 123 aa9.84□□□□□ -0.83
TNFRSF12A-202ENST00000341627 IGKV2-24A0A0C4DH68 120 aa9.84□□□□□ -0.83
TNFRSF12A-202ENST00000341627 LOC107984640A0A0U1RRK4 108 aa9.84□□□□□ -0.83
TNFRSF12A-202ENST00000341627 PANO1I0J062 215 aa9.84□□□□□ -0.83
TNFRSF12A-202ENST00000341627 SERF1AO75920 110 aa9.84□□□□□ -0.83
TNFRSF12A-202ENST00000341627 CHTF8P0CG12 524 aa9.84□□□□□ -0.83
TNFRSF12A-202ENST00000341627 KIAA0087Q14695 138 aa9.84□□□□□ -0.83
TNFRSF12A-202ENST00000341627 SPACA4Q8TDM5 124 aa9.84□□□□□ -0.83
TNFRSF12A-202ENST00000341627 TOMM7Q9P0U1 55 aa9.84□□□□□ -0.83
TNFRSF12A-202ENST00000341627 H3BRM9 83 aa9.83□□□□□ -0.84
TNFRSF12A-202ENST00000341627 IGLC3P0DOY3 106 aa9.83□□□□□ -0.84
TNFRSF12A-202ENST00000341627 FAM19A2Q8N3H0 131 aa9.83□□□□□ -0.84
TNFRSF12A-202ENST00000341627 IFI27L1Q96BM0 104 aa9.83□□□□□ -0.84
TNFRSF12A-202ENST00000341627 MYCBP2O75592 4640 aa9.83□□□□□ -0.84
TNFRSF12A-202ENST00000341627 A0A096LNI7 61 aa9.82□□□□□ -0.84
TNFRSF12A-202ENST00000341627 CKS1BP61024 79 aa9.82□□□□□ -0.84
TNFRSF12A-202ENST00000341627 MAJINQ3KP22 176 aa9.82□□□□□ -0.84
TNFRSF12A-202ENST00000341627 C6orf226Q5I0X4 101 aa9.82□□□□□ -0.84
TNFRSF12A-202ENST00000341627 Q8IZM0 81 aa9.82□□□□□ -0.84
TNFRSF12A-202ENST00000341627 LINC00528Q8N1L1 170 aa9.82□□□□□ -0.84
TNFRSF12A-202ENST00000341627 HERC1Q15751 4861 aa9.81□□□□□ -0.84
TNFRSF12A-202ENST00000341627 A0A087WYN8 130 aa9.81□□□□□ -0.84
TNFRSF12A-202ENST00000341627 INAFM2P0DMQ5 153 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms