RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 DEFB4AO15263 64 aa10.62□□□□□ -0.71
TUBB4B-201ENST00000340384 A0A1B0GWB2 263 aa10.61□□□□□ -0.71
TUBB4B-201ENST00000340384 SPINK8P0C7L1 97 aa10.61□□□□□ -0.71
TUBB4B-201ENST00000340384 C12orf74Q32Q52 190 aa10.61□□□□□ -0.71
TUBB4B-201ENST00000340384 LINC00242Q5T6M2 205 aa10.61□□□□□ -0.71
TUBB4B-201ENST00000340384 FABP2P12104 132 aa10.6□□□□□ -0.71
TUBB4B-201ENST00000340384 GAGE6Q13070 117 aa10.6□□□□□ -0.71
TUBB4B-201ENST00000340384 CDKN2A-AS1Q9UH64 79 aa10.6□□□□□ -0.71
TUBB4B-201ENST00000340384 STAB2Q8WWQ8 2551 aa10.6□□□□□ -0.71
TUBB4B-201ENST00000340384 TRAV8-3A0A0A6YYJ7 113 aa10.59□□□□□ -0.71
TUBB4B-201ENST00000340384 TRAV13-1A0A0B4J241 112 aa10.59□□□□□ -0.71
TUBB4B-201ENST00000340384 A0A1W2PPM0 123 aa10.59□□□□□ -0.71
TUBB4B-201ENST00000340384 K7EP13 123 aa10.59□□□□□ -0.71
TUBB4B-201ENST00000340384 ZFAND6Q6FIF0 208 aa10.59□□□□□ -0.71
TUBB4B-201ENST00000340384 SH2D6Q7Z4S9 175 aa10.59□□□□□ -0.71
TUBB4B-201ENST00000340384 NDUFA12Q9UI09 145 aa10.59□□□□□ -0.71
TUBB4B-201ENST00000340384 TGP01266 2768 aa10.59□□□□□ -0.71
TUBB4B-201ENST00000340384 TRAV26-1A0A087WT03 109 aa10.58□□□□□ -0.72
TUBB4B-201ENST00000340384 A0A0J9YXY3 114 aa10.58□□□□□ -0.72
TUBB4B-201ENST00000340384 GAGE10A6NGK3 116 aa10.58□□□□□ -0.72
TUBB4B-201ENST00000340384 K7ERJ3 54 aa10.58□□□□□ -0.72
TUBB4B-201ENST00000340384 IGHV3-30P01768 117 aa10.58□□□□□ -0.72
TUBB4B-201ENST00000340384 NHLRC4P0CG21 123 aaPredicted RBP10.58□□□□□ -0.72
TUBB4B-201ENST00000340384 IGHV3-30-5P0DP03 117 aa10.58□□□□□ -0.72
TUBB4B-201ENST00000340384 CCL25O15444 150 aa10.57□□□□□ -0.72
TUBB4B-201ENST00000340384 RPL24P83731 157 aaKnown RBP10.57□□□□□ -0.72
TUBB4B-201ENST00000340384 IGLV5-39A0A0G2JS06 123 aa10.56□□□□□ -0.72
TUBB4B-201ENST00000340384 A0A0J9YWU9 116 aa10.56□□□□□ -0.72
TUBB4B-201ENST00000340384 NDUFA1O15239 70 aa10.56□□□□□ -0.72
TUBB4B-201ENST00000340384 TIMM17BO60830 172 aa10.56□□□□□ -0.72
TUBB4B-201ENST00000340384 COX6A2Q02221 97 aa10.56□□□□□ -0.72
TUBB4B-201ENST00000340384 C10orf126Q8N4M7 172 aa10.56□□□□□ -0.72
TUBB4B-201ENST00000340384 CELA1Q9UNI1 258 aa10.56□□□□□ -0.72
TUBB4B-201ENST00000340384 A0A1B0GUV1 79 aa10.55□□□□□ -0.72
TUBB4B-201ENST00000340384 F5H768 121 aa10.55□□□□□ -0.72
TUBB4B-201ENST00000340384 K7EP34 96 aa10.55□□□□□ -0.72
TUBB4B-201ENST00000340384 CIRBPQ14011 172 aaKnown RBP10.55□□□□□ -0.72
TUBB4B-201ENST00000340384 IGLL5B9A064 214 aa10.55□□□□□ -0.72
TUBB4B-201ENST00000340384 MRPL23Q16540 153 aaKnown RBP10.55□□□□□ -0.72
TUBB4B-201ENST00000340384 SPANXDQ9BXN6 97 aa10.55□□□□□ -0.72
TUBB4B-201ENST00000340384 C11orf68Q9H3H3 251 aaKnown RBP10.55□□□□□ -0.72
TUBB4B-201ENST00000340384 SPANXCQ9NY87 97 aa10.55□□□□□ -0.72
TUBB4B-201ENST00000340384 SPCS1Q9Y6A9 102 aa10.55□□□□□ -0.72
TUBB4B-201ENST00000340384 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.54□□□□□ -0.72
TUBB4B-201ENST00000340384 SMIM1B2RUZ4 78 aa10.54□□□□□ -0.72
TUBB4B-201ENST00000340384 TMEM262E9PQX1 116 aa10.54□□□□□ -0.72
TUBB4B-201ENST00000340384 COPS9Q8WXC6 57 aa10.53□□□□□ -0.72
TUBB4B-201ENST00000340384 ICOSQ9Y6W8 199 aa10.53□□□□□ -0.72
TUBB4B-201ENST00000340384 IGLV4-60A0A075B6I1 120 aa10.52□□□□□ -0.73
TUBB4B-201ENST00000340384 HERV-K104P63124 156 aa10.52□□□□□ -0.73
TUBB4B-201ENST00000340384 LYRM7Q5U5X0 104 aa10.52□□□□□ -0.73
TUBB4B-201ENST00000340384 NAA38Q9BRA0 125 aaKnown RBP10.52□□□□□ -0.73
TUBB4B-201ENST00000340384 IFITM1P13164 125 aa10.51□□□□□ -0.73
TUBB4B-201ENST00000340384 SS18Q15532 418 aa10.51□□□□□ -0.73
TUBB4B-201ENST00000340384 APOMO95445 188 aa10.51□□□□□ -0.73
TUBB4B-201ENST00000340384 HTN3P15516 51 aa10.51□□□□□ -0.73
TUBB4B-201ENST00000340384 MIAQ16674 131 aa10.51□□□□□ -0.73
TUBB4B-201ENST00000340384 RBX1P62877 108 aa10.5□□□□□ -0.73
TUBB4B-201ENST00000340384 MUSTN1Q8IVN3 82 aa10.5□□□□□ -0.73
TUBB4B-201ENST00000340384 PGPEP1Q9NXJ5 209 aa10.5□□□□□ -0.73
TUBB4B-201ENST00000340384 DNAH7Q8WXX0 4024 aa10.49□□□□□ -0.73
TUBB4B-201ENST00000340384 A0A096LPF7 62 aa10.49□□□□□ -0.73
TUBB4B-201ENST00000340384 A0A0B4J2C4 111 aa10.49□□□□□ -0.73
TUBB4B-201ENST00000340384 IGKV3OR2-268A0A0C4DH90 116 aa10.49□□□□□ -0.73
TUBB4B-201ENST00000340384 SFTA2Q6UW10 78 aa10.49□□□□□ -0.73
TUBB4B-201ENST00000340384 LITAFQ99732 161 aa10.49□□□□□ -0.73
TUBB4B-201ENST00000340384 Q9H8V8 135 aa10.49□□□□□ -0.73
TUBB4B-201ENST00000340384 PRO1854Q9UHT4 67 aa10.49□□□□□ -0.73
TUBB4B-201ENST00000340384 LINC00959A0A1B0GUT2 108 aa10.48□□□□□ -0.73
TUBB4B-201ENST00000340384 A4D1N5 150 aa10.48□□□□□ -0.73
TUBB4B-201ENST00000340384 H3BNG1 76 aa10.48□□□□□ -0.73
TUBB4B-201ENST00000340384 PRSS2P07478 247 aa10.48□□□□□ -0.73
TUBB4B-201ENST00000340384 CFC1BP0CG36 223 aa10.48□□□□□ -0.73
TUBB4B-201ENST00000340384 CFC1P0CG37 223 aa10.48□□□□□ -0.73
TUBB4B-201ENST00000340384 NANOS2P60321 138 aaKnown RBP10.47□□□□□ -0.73
TUBB4B-201ENST00000340384 LELP1Q5T871 98 aa10.47□□□□□ -0.73
TUBB4B-201ENST00000340384 LINC01561Q8N1V8 128 aa10.47□□□□□ -0.73
TUBB4B-201ENST00000340384 COX7B2Q8TF08 81 aa10.47□□□□□ -0.73
TUBB4B-201ENST00000340384 A0A087WZ39 114 aa10.47□□□□□ -0.73
TUBB4B-201ENST00000340384 IGHV3OR16-9A0A0B4J2B5 98 aa10.47□□□□□ -0.73
TUBB4B-201ENST00000340384 CSMD3Q7Z407 3707 aa10.46□□□□□ -0.74
TUBB4B-201ENST00000340384 TSPAN13O95857 204 aa10.45□□□□□ -0.74
TUBB4B-201ENST00000340384 MEIG1Q5JSS6 88 aa10.45□□□□□ -0.74
TUBB4B-201ENST00000340384 C11orf45Q8TAV5 145 aa10.45□□□□□ -0.74
TUBB4B-201ENST00000340384 ZNF625Q96I27 306 aaPredicted RBP10.45□□□□□ -0.74
TUBB4B-201ENST00000340384 DYNC2H1Q8NCM8 4307 aaKnown RBP10.44□□□□□ -0.74
TUBB4B-201ENST00000340384 Q6ZTC4 211 aa10.44□□□□□ -0.74
TUBB4B-201ENST00000340384 ADAMTSL4-AS1Q5T5F5 129 aa10.44□□□□□ -0.74
TUBB4B-201ENST00000340384 PPDPFQ9H3Y8 114 aa10.44□□□□□ -0.74
TUBB4B-201ENST00000340384 ERG28Q9UKR5 140 aa10.44□□□□□ -0.74
TUBB4B-201ENST00000340384 ANGP03950 147 aaKnown RBP10.42□□□□□ -0.74
TUBB4B-201ENST00000340384 LOC107984156A0A0G2JMH3 177 aa10.41□□□□□ -0.74
TUBB4B-201ENST00000340384 ARL17AQ8IVW1 177 aa10.41□□□□□ -0.74
TUBB4B-201ENST00000340384 TOMM7Q9P0U1 55 aa10.41□□□□□ -0.74
TUBB4B-201ENST00000340384 TRBV20-1A0A075B6N2 111 aa10.4□□□□□ -0.74
TUBB4B-201ENST00000340384 IGHV3-33P01772 117 aa10.4□□□□□ -0.74
TUBB4B-201ENST00000340384 XCL1P47992 114 aa10.4□□□□□ -0.74
TUBB4B-201ENST00000340384 REG3AQ06141 175 aa10.4□□□□□ -0.74
TUBB4B-201ENST00000340384 CD164L2Q6UWJ8 174 aa10.4□□□□□ -0.74
TUBB4B-201ENST00000340384 C5orf38Q86SI9 138 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms