RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 SS18Q15532 418 aa10□□□□□ -0.81
CBX3-201ENST00000337620 CBY1Q9Y3M2 126 aa10□□□□□ -0.81
CBX3-201ENST00000337620 IGLV5-45A0A087WSX0 123 aa10□□□□□ -0.81
CBX3-201ENST00000337620 CSMD3Q7Z407 3707 aa10□□□□□ -0.81
CBX3-201ENST00000337620 TRAV8-3A0A0A6YYJ7 113 aa9.99□□□□□ -0.81
CBX3-201ENST00000337620 BOD1L2Q8IYS8 172 aa9.99□□□□□ -0.81
CBX3-201ENST00000337620 NUPR2A6NF83 97 aa9.98□□□□□ -0.81
CBX3-201ENST00000337620 CCL25O15444 150 aa9.98□□□□□ -0.81
CBX3-201ENST00000337620 XCL1P47992 114 aa9.98□□□□□ -0.81
CBX3-201ENST00000337620 IGLV10-54A0A075B6I4 117 aa9.98□□□□□ -0.81
CBX3-201ENST00000337620 HNRNPA3P51991 378 aaKnown RBP9.98□□□□□ -0.81
CBX3-201ENST00000337620 MAPKAPK5-AS1Q8N8E1 139 aa9.98□□□□□ -0.81
CBX3-201ENST00000337620 MRPS16Q9Y3D3 137 aaKnown RBP9.98□□□□□ -0.81
CBX3-201ENST00000337620 LEPROTO15243 131 aa9.97□□□□□ -0.81
CBX3-201ENST00000337620 APLNQ9ULZ1 77 aa9.97□□□□□ -0.81
CBX3-201ENST00000337620 KLK5Q9Y337 293 aaPredicted RBP9.97□□□□□ -0.81
CBX3-201ENST00000337620 IGHV1-58A0A0C4DH39 117 aa9.97□□□□□ -0.81
CBX3-201ENST00000337620 J3QQQ9 107 aa9.97□□□□□ -0.81
CBX3-201ENST00000337620 TSPEAR-AS2P59090 65 aa9.97□□□□□ -0.81
CBX3-201ENST00000337620 LINC01556Q5JQF7 62 aa9.97□□□□□ -0.81
CBX3-201ENST00000337620 UBE2WQ96B02 151 aa9.97□□□□□ -0.81
CBX3-201ENST00000337620 DLEU1O43261 78 aa9.96□□□□□ -0.82
CBX3-201ENST00000337620 CRPP02741 224 aa9.96□□□□□ -0.82
CBX3-201ENST00000337620 LGALS3P17931 250 aaKnown RBP9.96□□□□□ -0.82
CBX3-201ENST00000337620 ENHOQ6UWT2 76 aa9.96□□□□□ -0.82
CBX3-201ENST00000337620 PRR34Q9NV39 138 aa9.96□□□□□ -0.82
CBX3-201ENST00000337620 IGHV3OR16-9A0A0B4J2B5 98 aa9.95□□□□□ -0.82
CBX3-201ENST00000337620 C5orf38Q86SI9 138 aa9.95□□□□□ -0.82
CBX3-201ENST00000337620 CHCHD10Q8WYQ3 142 aaPredicted RBP9.95□□□□□ -0.82
CBX3-201ENST00000337620 PLEKHB2Q96CS7 222 aa9.95□□□□□ -0.82
CBX3-201ENST00000337620 PLECQ15149 4684 aaKnown RBP9.95□□□□□ -0.82
CBX3-201ENST00000337620 MYMXA0A1B0GTQ4 84 aa9.95□□□□□ -0.82
CBX3-201ENST00000337620 ZNF815PA8K554 130 aa9.95□□□□□ -0.82
CBX3-201ENST00000337620 SIVA1O15304 175 aa9.95□□□□□ -0.82
CBX3-201ENST00000337620 SMIM1B2RUZ4 78 aa9.94□□□□□ -0.82
CBX3-201ENST00000337620 DNAH10OSP0CZ25 163 aa9.94□□□□□ -0.82
CBX3-201ENST00000337620 LYSTQ99698 3801 aa9.94□□□□□ -0.82
CBX3-201ENST00000337620 ZFAND6Q6FIF0 208 aa9.94□□□□□ -0.82
CBX3-201ENST00000337620 CD164L2Q6UWJ8 174 aa9.93□□□□□ -0.82
CBX3-201ENST00000337620 C2orf91Q6ZV80 131 aa9.93□□□□□ -0.82
CBX3-201ENST00000337620 TGP01266 2768 aa9.93□□□□□ -0.82
CBX3-201ENST00000337620 A0A087WZ39 114 aa9.92□□□□□ -0.82
CBX3-201ENST00000337620 UBE2DNLQ8IWF7 75 aa9.92□□□□□ -0.82
CBX3-201ENST00000337620 IGLV5-39A0A0G2JS06 123 aa9.92□□□□□ -0.82
CBX3-201ENST00000337620 UPK3BQ9BT76 320 aa9.92□□□□□ -0.82
CBX3-201ENST00000337620 Q9H8V8 135 aa9.92□□□□□ -0.82
CBX3-201ENST00000337620 STARD9Q9P2P6 4700 aa9.92□□□□□ -0.82
CBX3-201ENST00000337620 TENM2Q9NT68 2774 aa9.91□□□□□ -0.82
CBX3-201ENST00000337620 TRAV8-4A0A0B4J246 113 aa9.91□□□□□ -0.82
CBX3-201ENST00000337620 GAGE12HA6NDE8 117 aa9.91□□□□□ -0.82
CBX3-201ENST00000337620 MIAQ16674 131 aa9.91□□□□□ -0.82
CBX3-201ENST00000337620 SCGB1D4Q6XE38 83 aa9.91□□□□□ -0.82
CBX3-201ENST00000337620 COX7A2LO14548 114 aa9.9□□□□□ -0.82
CBX3-201ENST00000337620 TOMM7Q9P0U1 55 aa9.9□□□□□ -0.82
CBX3-201ENST00000337620 NDUFA12Q9UI09 145 aa9.9□□□□□ -0.82
CBX3-201ENST00000337620 FOXI1Q12951 378 aa9.89□□□□□ -0.83
CBX3-201ENST00000337620 MALP21145 153 aa9.89□□□□□ -0.83
CBX3-201ENST00000337620 PCP4P48539 62 aa9.89□□□□□ -0.83
CBX3-201ENST00000337620 Q9HAA7 133 aa9.88□□□□□ -0.83
CBX3-201ENST00000337620 COX7B2Q8TF08 81 aa9.88□□□□□ -0.83
CBX3-201ENST00000337620 MUC7Q8TAX7 377 aa9.87□□□□□ -0.83
CBX3-201ENST00000337620 HIGD1BQ9P298 99 aa9.87□□□□□ -0.83
CBX3-201ENST00000337620 IGKV2D-24A0A075B6R9 120 aa9.86□□□□□ -0.83
CBX3-201ENST00000337620 HINT1P49773 126 aaPredicted RBP9.86□□□□□ -0.83
CBX3-201ENST00000337620 C1orf43Q9BWL3 253 aa9.86□□□□□ -0.83
CBX3-201ENST00000337620 IBA57-AS1B1ANH7 110 aa9.86□□□□□ -0.83
CBX3-201ENST00000337620 BATFQ16520 125 aa9.86□□□□□ -0.83
CBX3-201ENST00000337620 LINC01561Q8N1V8 128 aa9.86□□□□□ -0.83
CBX3-201ENST00000337620 C10orf126Q8N4M7 172 aa9.86□□□□□ -0.83
CBX3-201ENST00000337620 DNAH1Q9P2D7 4330 aa9.85□□□□□ -0.83
CBX3-201ENST00000337620 EREGO14944 169 aa9.85□□□□□ -0.83
CBX3-201ENST00000337620 NDUFA1O15239 70 aa9.85□□□□□ -0.83
CBX3-201ENST00000337620 ORAOV1Q8WV07 137 aa9.85□□□□□ -0.83
CBX3-201ENST00000337620 A0A0J9YXY3 114 aa9.84□□□□□ -0.83
CBX3-201ENST00000337620 M0R143 59 aa9.84□□□□□ -0.83
CBX3-201ENST00000337620 PRSS2P07478 247 aa9.84□□□□□ -0.83
CBX3-201ENST00000337620 C6orf226Q5I0X4 101 aa9.84□□□□□ -0.83
CBX3-201ENST00000337620 ZNF625Q96I27 306 aaPredicted RBP9.84□□□□□ -0.83
CBX3-201ENST00000337620 WWC2-AS2Q96NR7 200 aa9.84□□□□□ -0.83
CBX3-201ENST00000337620 HIST1H4GQ99525 98 aa9.83□□□□□ -0.84
CBX3-201ENST00000337620 SNHG12Q9BXW3 62 aa9.83□□□□□ -0.84
CBX3-201ENST00000337620 APOMO95445 188 aa9.83□□□□□ -0.84
CBX3-201ENST00000337620 HSD52Q0P140 79 aa9.83□□□□□ -0.84
CBX3-201ENST00000337620 KRTAP26-1Q6PEX3 210 aa9.83□□□□□ -0.84
CBX3-201ENST00000337620 SRSF9Q13242 221 aaKnown RBP eCLIP9.82□□□□□ -0.84
CBX3-201ENST00000337620 C21orf62-AS1Q17RA5 79 aa9.82□□□□□ -0.84
CBX3-201ENST00000337620 Q8IZM0 81 aa9.82□□□□□ -0.84
CBX3-201ENST00000337620 K7EP13 123 aa9.81□□□□□ -0.84
CBX3-201ENST00000337620 CFAP161Q6P656 301 aa9.81□□□□□ -0.84
CBX3-201ENST00000337620 GCSHP23434 173 aa9.8□□□□□ -0.84
CBX3-201ENST00000337620 BVES-AS1Q5T3Y7 98 aa9.8□□□□□ -0.84
CBX3-201ENST00000337620 VPS13DQ5THJ4 4388 aa9.8□□□□□ -0.84
CBX3-201ENST00000337620 HERV-K104P63124 156 aa9.8□□□□□ -0.84
CBX3-201ENST00000337620 KRTAP1-5Q9BYS1 174 aa9.8□□□□□ -0.84
CBX3-201ENST00000337620 TMEM238C9JI98 176 aa9.79□□□□□ -0.84
CBX3-201ENST00000337620 CKS1BP61024 79 aa9.79□□□□□ -0.84
CBX3-201ENST00000337620 KIAA0087Q14695 138 aa9.79□□□□□ -0.84
CBX3-201ENST00000337620 MEIG1Q5JSS6 88 aa9.79□□□□□ -0.84
CBX3-201ENST00000337620 C2orf82Q6UX34 121 aa9.79□□□□□ -0.84
CBX3-201ENST00000337620 RMI2Q96E14 147 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms