RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 DNAH17Q9UFH2 4485 aa11.62□□□□□ -0.55
CHGA-202ENST00000334654 CCL25O15444 150 aa11.61□□□□□ -0.55
CHGA-202ENST00000334654 SS18Q15532 418 aa11.61□□□□□ -0.55
CHGA-202ENST00000334654 RMI2Q96E14 147 aa11.61□□□□□ -0.55
CHGA-202ENST00000334654 PMVKQ15126 192 aa11.6□□□□□ -0.55
CHGA-202ENST00000334654 LINC00242Q5T6M2 205 aa11.6□□□□□ -0.55
CHGA-202ENST00000334654 FAM19A3Q7Z5A8 133 aa11.6□□□□□ -0.55
CHGA-202ENST00000334654 TM2D2Q9BX73 214 aa11.6□□□□□ -0.55
CHGA-202ENST00000334654 COX11Q9Y6N1 276 aa11.6□□□□□ -0.55
CHGA-202ENST00000334654 TRAV12-1A0A0B4J245 112 aa11.59□□□□□ -0.55
CHGA-202ENST00000334654 FOXI1Q12951 378 aa11.59□□□□□ -0.55
CHGA-202ENST00000334654 GAGE12HA6NDE8 117 aa11.58□□□□□ -0.56
CHGA-202ENST00000334654 PRSS1P07477 247 aa11.58□□□□□ -0.56
CHGA-202ENST00000334654 XCL1P47992 114 aa11.58□□□□□ -0.56
CHGA-202ENST00000334654 COX6A2Q02221 97 aa11.58□□□□□ -0.56
CHGA-202ENST00000334654 C2orf88Q9BSF0 95 aa11.58□□□□□ -0.56
CHGA-202ENST00000334654 CD164L2Q6UWJ8 174 aa11.57□□□□□ -0.56
CHGA-202ENST00000334654 IGHV3OR16-9A0A0B4J2B5 98 aa11.57□□□□□ -0.56
CHGA-202ENST00000334654 A0A0J9YXV3 536 aa11.57□□□□□ -0.56
CHGA-202ENST00000334654 LRCOL1A6NCL2 159 aa11.57□□□□□ -0.56
CHGA-202ENST00000334654 TNP2Q05952 138 aa11.57□□□□□ -0.56
CHGA-202ENST00000334654 WFDC2Q14508 124 aa11.57□□□□□ -0.56
CHGA-202ENST00000334654 FAT2Q9NYQ8 4349 aa11.55□□□□□ -0.56
CHGA-202ENST00000334654 PSCAO43653 123 aa11.55□□□□□ -0.56
CHGA-202ENST00000334654 IGLV4-69A0A075B6H9 119 aa11.54□□□□□ -0.56
CHGA-202ENST00000334654 VAMP8Q9BV40 100 aa11.54□□□□□ -0.56
CHGA-202ENST00000334654 TINCRA0A1B0GVN0 87 aa11.53□□□□□ -0.56
CHGA-202ENST00000334654 A0A087WTM6 91 aa11.52□□□□□ -0.56
CHGA-202ENST00000334654 HSBP1L1C9JCN9 74 aa11.52□□□□□ -0.56
CHGA-202ENST00000334654 IGLC3P0DOY3 106 aa11.52□□□□□ -0.56
CHGA-202ENST00000334654 PLNP26678 52 aa11.52□□□□□ -0.56
CHGA-202ENST00000334654 ODF1Q14990 250 aa11.52□□□□□ -0.56
CHGA-202ENST00000334654 C5orf38Q86SI9 138 aa11.52□□□□□ -0.56
CHGA-202ENST00000334654 TSTD3H0UI37 97 aa11.51□□□□□ -0.57
CHGA-202ENST00000334654 LECT2O14960 151 aa11.51□□□□□ -0.57
CHGA-202ENST00000334654 LINC00336Q6ZUF6 198 aa11.51□□□□□ -0.57
CHGA-202ENST00000334654 CHTOPQ9Y3Y2 248 aaKnown RBP11.51□□□□□ -0.57
CHGA-202ENST00000334654 IGLV5-45A0A087WSX0 123 aa11.51□□□□□ -0.57
CHGA-202ENST00000334654 F8VRH5 84 aa11.51□□□□□ -0.57
CHGA-202ENST00000334654 HERVK_113P63121 156 aa11.51□□□□□ -0.57
CHGA-202ENST00000334654 SEC11AP67812 179 aa11.51□□□□□ -0.57
CHGA-202ENST00000334654 C15orf56Q8N910 161 aa11.51□□□□□ -0.57
CHGA-202ENST00000334654 MRPL35Q9NZE8 188 aaKnown RBP11.51□□□□□ -0.57
CHGA-202ENST00000334654 CDKN2A-AS1Q9UH64 79 aa11.51□□□□□ -0.57
CHGA-202ENST00000334654 A0A087WZ39 114 aa11.5□□□□□ -0.57
CHGA-202ENST00000334654 USP17L23D6RBM5 183 aa11.5□□□□□ -0.57
CHGA-202ENST00000334654 H0Y8G0 127 aa11.5□□□□□ -0.57
CHGA-202ENST00000334654 COX7A2LO14548 114 aa11.5□□□□□ -0.57
CHGA-202ENST00000334654 DPM2O94777 84 aa11.5□□□□□ -0.57
CHGA-202ENST00000334654 C11orf86A6NJI1 115 aa11.49□□□□□ -0.57
CHGA-202ENST00000334654 CDPF1Q6NVV7 123 aa11.49□□□□□ -0.57
CHGA-202ENST00000334654 GEMIN7Q9H840 131 aaKnown RBP11.49□□□□□ -0.57
CHGA-202ENST00000334654 IGKCP01834 107 aa11.48□□□□□ -0.57
CHGA-202ENST00000334654 CHAC1Q9BUX1 264 aa11.48□□□□□ -0.57
CHGA-202ENST00000334654 DNAH11Q96DT5 4516 aa11.48□□□□□ -0.57
CHGA-202ENST00000334654 PKD1P98161 4303 aa11.47□□□□□ -0.57
CHGA-202ENST00000334654 ZNF22P17026 224 aaPredicted RBP11.47□□□□□ -0.57
CHGA-202ENST00000334654 PMCHL2Q9BQD1 86 aa11.47□□□□□ -0.57
CHGA-202ENST00000334654 LINC01561Q8N1V8 128 aa11.46□□□□□ -0.57
CHGA-202ENST00000334654 LINC00469Q8N7U9 141 aa11.46□□□□□ -0.57
CHGA-202ENST00000334654 A0A1B0GVY2 172 aa11.45□□□□□ -0.58
CHGA-202ENST00000334654 SPATA45Q537H7 98 aa11.45□□□□□ -0.58
CHGA-202ENST00000334654 Q8N814 137 aa11.45□□□□□ -0.58
CHGA-202ENST00000334654 PAM16Q9Y3D7 125 aa11.45□□□□□ -0.58
CHGA-202ENST00000334654 HECTD4Q9Y4D8 3996 aa11.45□□□□□ -0.58
CHGA-202ENST00000334654 IGHV3-64A0A075B6Q5 118 aa11.44□□□□□ -0.58
CHGA-202ENST00000334654 IGHV1-58A0A0C4DH39 117 aa11.44□□□□□ -0.58
CHGA-202ENST00000334654 MALP21145 153 aa11.44□□□□□ -0.58
CHGA-202ENST00000334654 GVQW2A0A096LPI5 108 aaPredicted RBP11.44□□□□□ -0.58
CHGA-202ENST00000334654 CFAP161Q6P656 301 aa11.44□□□□□ -0.58
CHGA-202ENST00000334654 SMIM1B2RUZ4 78 aa11.43□□□□□ -0.58
CHGA-202ENST00000334654 HIGD2BQ4VC39 106 aa11.43□□□□□ -0.58
CHGA-202ENST00000334654 ATOH7Q8N100 152 aa11.43□□□□□ -0.58
CHGA-202ENST00000334654 SLPIP03973 132 aa11.42□□□□□ -0.58
CHGA-202ENST00000334654 KRTAP10-2P60368 255 aa11.42□□□□□ -0.58
CHGA-202ENST00000334654 KIAA0087Q14695 138 aa11.42□□□□□ -0.58
CHGA-202ENST00000334654 NTN5Q8WTR8 489 aaPredicted RBP11.42□□□□□ -0.58
CHGA-202ENST00000334654 LINC00526Q96FQ7 95 aa11.42□□□□□ -0.58
CHGA-202ENST00000334654 APOMO95445 188 aa11.41□□□□□ -0.58
CHGA-202ENST00000334654 SPINK8P0C7L1 97 aa11.41□□□□□ -0.58
CHGA-202ENST00000334654 C14orf177Q52M58 125 aa11.41□□□□□ -0.58
CHGA-202ENST00000334654 TMEM170BQ5T4T1 132 aa11.41□□□□□ -0.58
CHGA-202ENST00000334654 ORAOV1Q8WV07 137 aa11.41□□□□□ -0.58
CHGA-202ENST00000334654 MIEN1Q9BRT3 115 aa11.41□□□□□ -0.58
CHGA-202ENST00000334654 hDV102S1A0JD36 115 aa11.4□□□□□ -0.58
CHGA-202ENST00000334654 FUSP35637 526 aaKnown RBP eCLIP11.4□□□□□ -0.58
CHGA-202ENST00000334654 UQCR10Q9UDW1 63 aa11.4□□□□□ -0.58
CHGA-202ENST00000334654 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.39□□□□□ -0.59
CHGA-202ENST00000334654 IGLV5-39A0A0G2JS06 123 aa11.39□□□□□ -0.59
CHGA-202ENST00000334654 TMEM223A0PJW6 202 aa11.39□□□□□ -0.59
CHGA-202ENST00000334654 H3BRM9 83 aa11.39□□□□□ -0.59
CHGA-202ENST00000334654 EREGO14944 169 aa11.39□□□□□ -0.59
CHGA-202ENST00000334654 DLEU1O43261 78 aa11.38□□□□□ -0.59
CHGA-202ENST00000334654 HERVK_113P61574 105 aa11.38□□□□□ -0.59
CHGA-202ENST00000334654 SPAG11BQ08648 103 aa11.38□□□□□ -0.59
CHGA-202ENST00000334654 ZNF561-AS1K7EIQ3 104 aa11.37□□□□□ -0.59
CHGA-202ENST00000334654 DDTP30046 118 aa11.37□□□□□ -0.59
CHGA-202ENST00000334654 MAJINQ3KP22 176 aa11.37□□□□□ -0.59
CHGA-202ENST00000334654 PRO1933Q9H354 126 aa11.37□□□□□ -0.59
CHGA-202ENST00000334654 COX8AP10176 69 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms