RNA–Protein interactions for RNA: ENST00000333256.10

TSSC4-201, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-201ENST00000333256 C5orf38Q86SI9 138 aa12.38□□□□□ -0.43
TSSC4-201ENST00000333256 FRAS1Q86XX4 4008 aa12.37□□□□□ -0.43
TSSC4-201ENST00000333256 TNP2Q05952 138 aa12.37□□□□□ -0.43
TSSC4-201ENST00000333256 PMCHL2Q9BQD1 86 aa12.37□□□□□ -0.43
TSSC4-201ENST00000333256 CHTOPQ9Y3Y2 248 aaKnown RBP12.37□□□□□ -0.43
TSSC4-201ENST00000333256 IGLV4-69A0A075B6H9 119 aa12.36□□□□□ -0.43
TSSC4-201ENST00000333256 TRAV12-1A0A0B4J245 112 aa12.36□□□□□ -0.43
TSSC4-201ENST00000333256 IGHV3OR16-9A0A0B4J2B5 98 aa12.36□□□□□ -0.43
TSSC4-201ENST00000333256 KRTDAPP60985 99 aa12.36□□□□□ -0.43
TSSC4-201ENST00000333256 PACRGQ96M98 296 aaPredicted RBP12.36□□□□□ -0.43
TSSC4-201ENST00000333256 GEMIN7Q9H840 131 aaKnown RBP12.36□□□□□ -0.43
TSSC4-201ENST00000333256 MRPL35Q9NZE8 188 aaKnown RBP12.36□□□□□ -0.43
TSSC4-201ENST00000333256 C3orf79P0CE67 100 aa12.35□□□□□ -0.43
TSSC4-201ENST00000333256 SPATA12Q7Z6I5 190 aa12.35□□□□□ -0.43
TSSC4-201ENST00000333256 DNAH17Q9UFH2 4485 aa12.35□□□□□ -0.43
TSSC4-201ENST00000333256 SYS1-DBNDD2H3BUS1 97 aa12.35□□□□□ -0.43
TSSC4-201ENST00000333256 ODF1Q14990 250 aa12.35□□□□□ -0.43
TSSC4-201ENST00000333256 FAM19A3Q7Z5A8 133 aa12.35□□□□□ -0.43
TSSC4-201ENST00000333256 CHAC1Q9BUX1 264 aa12.35□□□□□ -0.43
TSSC4-201ENST00000333256 TINCRA0A1B0GVN0 87 aa12.34□□□□□ -0.43
TSSC4-201ENST00000333256 LRCOL1A6NCL2 159 aa12.34□□□□□ -0.43
TSSC4-201ENST00000333256 COX7A2LO14548 114 aa12.34□□□□□ -0.43
TSSC4-201ENST00000333256 HERVK_113P63121 156 aa12.34□□□□□ -0.43
TSSC4-201ENST00000333256 LINC00469Q8N7U9 141 aa12.34□□□□□ -0.43
TSSC4-201ENST00000333256 CDKN2A-AS1Q9UH64 79 aa12.34□□□□□ -0.43
TSSC4-201ENST00000333256 C11orf86A6NJI1 115 aa12.33□□□□□ -0.44
TSSC4-201ENST00000333256 USP17L23D6RBM5 183 aa12.33□□□□□ -0.44
TSSC4-201ENST00000333256 IGLC3P0DOY3 106 aa12.33□□□□□ -0.44
TSSC4-201ENST00000333256 SEC11AP67812 179 aa12.33□□□□□ -0.44
TSSC4-201ENST00000333256 F8VRH5 84 aa12.32□□□□□ -0.44
TSSC4-201ENST00000333256 MALP21145 153 aa12.32□□□□□ -0.44
TSSC4-201ENST00000333256 A0A087WTM6 91 aa12.32□□□□□ -0.44
TSSC4-201ENST00000333256 FAT2Q9NYQ8 4349 aa12.31□□□□□ -0.44
TSSC4-201ENST00000333256 A0A087WZ39 114 aa12.3□□□□□ -0.44
TSSC4-201ENST00000333256 C15orf56Q8N910 161 aa12.3□□□□□ -0.44
TSSC4-201ENST00000333256 ZNF22P17026 224 aaPredicted RBP12.29□□□□□ -0.44
TSSC4-201ENST00000333256 HIGD2BQ4VC39 106 aa12.29□□□□□ -0.44
TSSC4-201ENST00000333256 PET117Q6UWS5 81 aa12.29□□□□□ -0.44
TSSC4-201ENST00000333256 IGLV5-45A0A087WSX0 123 aa12.29□□□□□ -0.44
TSSC4-201ENST00000333256 TMEM170BQ5T4T1 132 aa12.29□□□□□ -0.44
TSSC4-201ENST00000333256 OR10D4PQ8NGN7 298 aa12.28□□□□□ -0.44
TSSC4-201ENST00000333256 LINC00526Q96FQ7 95 aa12.28□□□□□ -0.44
TSSC4-201ENST00000333256 SPINK8P0C7L1 97 aa12.27□□□□□ -0.45
TSSC4-201ENST00000333256 FUSP35637 526 aaKnown RBP eCLIP12.27□□□□□ -0.45
TSSC4-201ENST00000333256 LINC01545Q5VT33 79 aa12.27□□□□□ -0.45
TSSC4-201ENST00000333256 LINC00336Q6ZUF6 198 aa12.27□□□□□ -0.45
TSSC4-201ENST00000333256 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.26□□□□□ -0.45
TSSC4-201ENST00000333256 IGHV1-58A0A0C4DH39 117 aa12.26□□□□□ -0.45
TSSC4-201ENST00000333256 DPM2O94777 84 aa12.26□□□□□ -0.45
TSSC4-201ENST00000333256 IGHV3-64A0A075B6Q5 118 aa12.26□□□□□ -0.45
TSSC4-201ENST00000333256 hDV102S1A0JD36 115 aa12.26□□□□□ -0.45
TSSC4-201ENST00000333256 CFAP161Q6P656 301 aa12.26□□□□□ -0.45
TSSC4-201ENST00000333256 ORAOV1Q8WV07 137 aa12.26□□□□□ -0.45
TSSC4-201ENST00000333256 SMIM1B2RUZ4 78 aa12.25□□□□□ -0.45
TSSC4-201ENST00000333256 IGKCP01834 107 aa12.25□□□□□ -0.45
TSSC4-201ENST00000333256 PLNP26678 52 aa12.25□□□□□ -0.45
TSSC4-201ENST00000333256 Q8N814 137 aa12.25□□□□□ -0.45
TSSC4-201ENST00000333256 H3BRM9 83 aa12.24□□□□□ -0.45
TSSC4-201ENST00000333256 APOMO95445 188 aa12.24□□□□□ -0.45
TSSC4-201ENST00000333256 TOMM7Q9P0U1 55 aa12.23□□□□□ -0.45
TSSC4-201ENST00000333256 GVQW2A0A096LPI5 108 aaPredicted RBP12.22□□□□□ -0.45
TSSC4-201ENST00000333256 EREGO14944 169 aa12.22□□□□□ -0.45
TSSC4-201ENST00000333256 SPAG11BQ08648 103 aa12.22□□□□□ -0.45
TSSC4-201ENST00000333256 ATOH7Q8N100 152 aa12.22□□□□□ -0.45
TSSC4-201ENST00000333256 C20orf202A1L168 122 aa12.22□□□□□ -0.45
TSSC4-201ENST00000333256 ZNF561-AS1K7EIQ3 104 aa12.22□□□□□ -0.45
TSSC4-201ENST00000333256 KRTAP10-2P60368 255 aa12.21□□□□□ -0.45
TSSC4-201ENST00000333256 C14orf177Q52M58 125 aa12.21□□□□□ -0.45
TSSC4-201ENST00000333256 LINC01561Q8N1V8 128 aa12.21□□□□□ -0.45
TSSC4-201ENST00000333256 TMEM223A0PJW6 202 aa12.2□□□□□ -0.46
TSSC4-201ENST00000333256 DNAH11Q96DT5 4516 aa12.2□□□□□ -0.46
TSSC4-201ENST00000333256 SLPIP03973 132 aa12.19□□□□□ -0.46
TSSC4-201ENST00000333256 KIAA0087Q14695 138 aa12.19□□□□□ -0.46
TSSC4-201ENST00000333256 A0A1B0GVY2 172 aa12.18□□□□□ -0.46
TSSC4-201ENST00000333256 SCGB1D1O95968 90 aa12.18□□□□□ -0.46
TSSC4-201ENST00000333256 C2orf82Q6UX34 121 aa12.18□□□□□ -0.46
TSSC4-201ENST00000333256 STPG4Q8N801 248 aa12.18□□□□□ -0.46
TSSC4-201ENST00000333256 NTN5Q8WTR8 489 aaPredicted RBP12.18□□□□□ -0.46
TSSC4-201ENST00000333256 PKD1P98161 4303 aa12.18□□□□□ -0.46
TSSC4-201ENST00000333256 IGLV5-39A0A0G2JS06 123 aa12.17□□□□□ -0.46
TSSC4-201ENST00000333256 PRSS2P07478 247 aa12.17□□□□□ -0.46
TSSC4-201ENST00000333256 COX7B2Q8TF08 81 aa12.17□□□□□ -0.46
TSSC4-201ENST00000333256 C6orf226Q5I0X4 101 aa12.16□□□□□ -0.46
TSSC4-201ENST00000333256 LINC01620Q4KN68 170 aa12.16□□□□□ -0.46
TSSC4-201ENST00000333256 Q8IZM0 81 aa12.16□□□□□ -0.46
TSSC4-201ENST00000333256 CAMK2N2Q96S95 79 aa12.16□□□□□ -0.46
TSSC4-201ENST00000333256 IGLV5-52A0A0A0MRZ9 124 aa12.14□□□□□ -0.47
TSSC4-201ENST00000333256 AKR1D1P51857 326 aa12.14□□□□□ -0.47
TSSC4-201ENST00000333256 C10orf25Q5T742 122 aa12.14□□□□□ -0.47
TSSC4-201ENST00000333256 UNQ6190/PRO20217Q6UXQ8 127 aa12.14□□□□□ -0.47
TSSC4-201ENST00000333256 Q6ZRU5 148 aa12.14□□□□□ -0.47
TSSC4-201ENST00000333256 SYCNQ0VAF6 134 aa12.13□□□□□ -0.47
TSSC4-201ENST00000333256 MAJINQ3KP22 176 aa12.13□□□□□ -0.47
TSSC4-201ENST00000333256 CKS1BP61024 79 aa12.13□□□□□ -0.47
TSSC4-201ENST00000333256 HERVK_113P61574 105 aa12.13□□□□□ -0.47
TSSC4-201ENST00000333256 CNBPP62633 177 aaKnown RBP12.13□□□□□ -0.47
TSSC4-201ENST00000333256 C2orf48Q96LS8 159 aa12.13□□□□□ -0.47
TSSC4-201ENST00000333256 TSPEAR-AS2P59090 65 aa12.12□□□□□ -0.47
TSSC4-201ENST00000333256 HECTD4Q9Y4D8 3996 aa12.12□□□□□ -0.47
TSSC4-201ENST00000333256 NDUFA1O15239 70 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms