RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 GAGE12JA6NER3 117 aa10.96□□□□□ -0.66
BRCC3-201ENST00000330045 GAGE4Q13068 117 aa10.96□□□□□ -0.66
BRCC3-201ENST00000330045 GAGE5Q13069 117 aa10.96□□□□□ -0.66
BRCC3-201ENST00000330045 TRAV8-4A0A0B4J246 113 aa10.95□□□□□ -0.66
BRCC3-201ENST00000330045 A0A0U1RRA0 63 aa10.95□□□□□ -0.66
BRCC3-201ENST00000330045 CDC42SE2Q9NRR3 84 aa10.95□□□□□ -0.66
BRCC3-201ENST00000330045 NSD1Q96L73 2696 aaPredicted RBP10.94□□□□□ -0.66
BRCC3-201ENST00000330045 TEX29Q8N6K0 151 aa10.94□□□□□ -0.66
BRCC3-201ENST00000330045 NOP10Q9NPE3 64 aaKnown RBP10.94□□□□□ -0.66
BRCC3-201ENST00000330045 FN1P02751 2386 aaKnown RBP10.94□□□□□ -0.66
BRCC3-201ENST00000330045 CITED1Q99966 193 aa10.94□□□□□ -0.66
BRCC3-201ENST00000330045 LY6G6DO95868 133 aa10.93□□□□□ -0.66
BRCC3-201ENST00000330045 SNCGO76070 127 aa10.93□□□□□ -0.66
BRCC3-201ENST00000330045 PRIMA1Q86XR5 153 aa10.93□□□□□ -0.66
BRCC3-201ENST00000330045 COPS9Q8WXC6 57 aa10.93□□□□□ -0.66
BRCC3-201ENST00000330045 F5H768 121 aa10.92□□□□□ -0.66
BRCC3-201ENST00000330045 MEIG1Q5JSS6 88 aa10.92□□□□□ -0.66
BRCC3-201ENST00000330045 UBE2L6O14933 153 aa10.91□□□□□ -0.66
BRCC3-201ENST00000330045 SOSTDC1Q6X4U4 206 aa10.91□□□□□ -0.66
BRCC3-201ENST00000330045 GIG44P09565 113 aaPredicted RBP10.91□□□□□ -0.66
BRCC3-201ENST00000330045 TMEM243Q9BU79 118 aa10.91□□□□□ -0.66
BRCC3-201ENST00000330045 CRLF1O75462 422 aa10.9□□□□□ -0.66
BRCC3-201ENST00000330045 TRAV26-1A0A087WT03 109 aa10.9□□□□□ -0.67
BRCC3-201ENST00000330045 HERV-K104P63124 156 aa10.9□□□□□ -0.67
BRCC3-201ENST00000330045 TRGV2A0A075B6R0 118 aa10.89□□□□□ -0.67
BRCC3-201ENST00000330045 CMC4P56277 68 aaPredicted RBP10.89□□□□□ -0.67
BRCC3-201ENST00000330045 GAGE2BQ13066 116 aa10.89□□□□□ -0.67
BRCC3-201ENST00000330045 GAGE2EQ4V326 116 aa10.89□□□□□ -0.67
BRCC3-201ENST00000330045 LINC01006Q8NI28 216 aa10.89□□□□□ -0.67
BRCC3-201ENST00000330045 C16orf74Q96GX8 76 aa10.89□□□□□ -0.67
BRCC3-201ENST00000330045 GAGE2DQ9UEU5 116 aa10.89□□□□□ -0.67
BRCC3-201ENST00000330045 PLAC8L1A1L4L8 177 aa10.89□□□□□ -0.67
BRCC3-201ENST00000330045 GAGE7O76087 117 aa10.89□□□□□ -0.67
BRCC3-201ENST00000330045 GAGE12FP0CL80 117 aa10.89□□□□□ -0.67
BRCC3-201ENST00000330045 GAGE12GP0CL81 117 aa10.89□□□□□ -0.67
BRCC3-201ENST00000330045 GAGE12IP0CL82 117 aa10.89□□□□□ -0.67
BRCC3-201ENST00000330045 ANAPC13Q9BS18 74 aa10.89□□□□□ -0.67
BRCC3-201ENST00000330045 COX7A2LO14548 114 aa10.88□□□□□ -0.67
BRCC3-201ENST00000330045 SHISA2Q6UWI4 295 aa10.87□□□□□ -0.67
BRCC3-201ENST00000330045 WFDC10AQ9H1F0 79 aa10.87□□□□□ -0.67
BRCC3-201ENST00000330045 LOC100131303A0A0U1RQF7 123 aa10.87□□□□□ -0.67
BRCC3-201ENST00000330045 INAFM1C9JVW0 142 aa10.87□□□□□ -0.67
BRCC3-201ENST00000330045 RNASE1P07998 156 aaKnown RBP10.87□□□□□ -0.67
BRCC3-201ENST00000330045 DEFB121Q5J5C9 76 aa10.87□□□□□ -0.67
BRCC3-201ENST00000330045 C15orf53Q8NAA6 179 aa10.87□□□□□ -0.67
BRCC3-201ENST00000330045 RPL35AP18077 110 aaKnown RBP10.86□□□□□ -0.67
BRCC3-201ENST00000330045 C2CD3Q4AC94 2353 aa10.86□□□□□ -0.67
BRCC3-201ENST00000330045 TENM1Q9UKZ4 2725 aa10.86□□□□□ -0.67
BRCC3-201ENST00000330045 TRBV6-4A0A1B0GX49 114 aa10.86□□□□□ -0.67
BRCC3-201ENST00000330045 VWFP04275 2813 aa10.85□□□□□ -0.67
BRCC3-201ENST00000330045 HILS1P60008 231 aa10.85□□□□□ -0.67
BRCC3-201ENST00000330045 JMJD1CQ15652 2540 aa10.84□□□□□ -0.67
BRCC3-201ENST00000330045 TRGV4A0A0C4DH28 118 aa10.84□□□□□ -0.67
BRCC3-201ENST00000330045 FAM240AA0A1B0GVK7 77 aa10.84□□□□□ -0.67
BRCC3-201ENST00000330045 Q6Q795 121 aa10.84□□□□□ -0.67
BRCC3-201ENST00000330045 NOTCH3Q9UM47 2321 aa10.84□□□□□ -0.67
BRCC3-201ENST00000330045 OVOL2Q9BRP0 275 aa10.84□□□□□ -0.67
BRCC3-201ENST00000330045 PPDPFQ9H3Y8 114 aa10.84□□□□□ -0.67
BRCC3-201ENST00000330045 C19orf73Q9NVV2 129 aa10.84□□□□□ -0.67
BRCC3-201ENST00000330045 FAM110AQ9BQ89 295 aa10.83□□□□□ -0.68
BRCC3-201ENST00000330045 IGLV1-51P01701 117 aa10.83□□□□□ -0.68
BRCC3-201ENST00000330045 GAGE6Q13070 117 aa10.83□□□□□ -0.68
BRCC3-201ENST00000330045 CSNK1G2-AS1Q8NCQ2 148 aa10.83□□□□□ -0.68
BRCC3-201ENST00000330045 MRPL23Q16540 153 aaKnown RBP10.82□□□□□ -0.68
BRCC3-201ENST00000330045 COX7B2Q8TF08 81 aa10.82□□□□□ -0.68
BRCC3-201ENST00000330045 NDUFV3P56181 108 aaKnown RBP10.82□□□□□ -0.68
BRCC3-201ENST00000330045 TTC32Q5I0X7 151 aa10.82□□□□□ -0.68
BRCC3-201ENST00000330045 IGKV3OR2-268A0A0C4DH90 116 aa10.81□□□□□ -0.68
BRCC3-201ENST00000330045 C16orf95Q9H693 158 aa10.81□□□□□ -0.68
BRCC3-201ENST00000330045 NHLRC4P0CG21 123 aaPredicted RBP10.81□□□□□ -0.68
BRCC3-201ENST00000330045 TOMM7Q9P0U1 55 aa10.81□□□□□ -0.68
BRCC3-201ENST00000330045 IGLV4-60A0A075B6I1 120 aa10.8□□□□□ -0.68
BRCC3-201ENST00000330045 TRACP01848 142 aa10.8□□□□□ -0.68
BRCC3-201ENST00000330045 KRTAP10-3P60369 221 aa10.8□□□□□ -0.68
BRCC3-201ENST00000330045 F8P00451 2351 aa10.8□□□□□ -0.68
BRCC3-201ENST00000330045 TRBV6-8A0A0A6YYG3 113 aa10.8□□□□□ -0.68
BRCC3-201ENST00000330045 FHL2Q14192 279 aa10.8□□□□□ -0.68
BRCC3-201ENST00000330045 TRAV13-2A0A0B4J235 113 aa10.79□□□□□ -0.68
BRCC3-201ENST00000330045 PF4P02776 101 aa10.79□□□□□ -0.68
BRCC3-201ENST00000330045 MIR7-3HGQ8N6C7 128 aa10.79□□□□□ -0.68
BRCC3-201ENST00000330045 CHCHD5Q9BSY4 110 aa10.79□□□□□ -0.68
BRCC3-201ENST00000330045 TRRAPQ9Y4A5 3859 aa10.78□□□□□ -0.68
BRCC3-201ENST00000330045 TEP1Q99973 2627 aaKnown RBP10.78□□□□□ -0.68
BRCC3-201ENST00000330045 FAM218AQ96MZ4 157 aa10.78□□□□□ -0.68
BRCC3-201ENST00000330045 IGHV3OR16-9A0A0B4J2B5 98 aa10.77□□□□□ -0.69
BRCC3-201ENST00000330045 CRPP02741 224 aa10.77□□□□□ -0.69
BRCC3-201ENST00000330045 BAALC-AS2P0C853 105 aa10.77□□□□□ -0.69
BRCC3-201ENST00000330045 FAM222AQ5U5X8 452 aa10.77□□□□□ -0.69
BRCC3-201ENST00000330045 SND1-IT1Q9HBX3 110 aa10.77□□□□□ -0.69
BRCC3-201ENST00000330045 RPL28P46779 137 aaKnown RBP10.77□□□□□ -0.69
BRCC3-201ENST00000330045 ACYP1P07311 99 aa10.76□□□□□ -0.69
BRCC3-201ENST00000330045 LINC00158P58513 81 aa10.76□□□□□ -0.69
BRCC3-201ENST00000330045 ATRQ13535 2644 aa10.76□□□□□ -0.69
BRCC3-201ENST00000330045 LINC00337Q8N6G1 96 aa10.76□□□□□ -0.69
BRCC3-201ENST00000330045 IGKV2-28A0A075B6P5 120 aa10.75□□□□□ -0.69
BRCC3-201ENST00000330045 IGKV2D-28P01615 120 aa10.75□□□□□ -0.69
BRCC3-201ENST00000330045 A0A087WZ39 114 aa10.75□□□□□ -0.69
BRCC3-201ENST00000330045 C5orf38Q86SI9 138 aa10.74□□□□□ -0.69
BRCC3-201ENST00000330045 IBA57-AS1B1ANH7 110 aa10.73□□□□□ -0.69
BRCC3-201ENST00000330045 DEFB130BP0DP73 79 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms