RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 SPACA4Q8TDM5 124 aa17.61■□□□□ 0.41
ATPAF1-201ENST00000329231 LINC00526Q96FQ7 95 aa17.61■□□□□ 0.41
ATPAF1-201ENST00000329231 PYGO1Q9Y3Y4 419 aa17.61■□□□□ 0.41
ATPAF1-201ENST00000329231 OPRPNQ99935 248 aaPredicted RBP17.6■□□□□ 0.41
ATPAF1-201ENST00000329231 CYSLTR1Q9Y271 337 aa17.6■□□□□ 0.41
ATPAF1-201ENST00000329231 C2orf66Q6UXQ4 117 aa17.59■□□□□ 0.41
ATPAF1-201ENST00000329231 PRSS3P2Q8NHM4 247 aa17.59■□□□□ 0.41
ATPAF1-201ENST00000329231 CARD19Q96LW7 228 aa17.59■□□□□ 0.41
ATPAF1-201ENST00000329231 PKIGQ9Y2B9 76 aa17.59■□□□□ 0.41
ATPAF1-201ENST00000329231 TRAPPC1Q9Y5R8 145 aa17.59■□□□□ 0.41
ATPAF1-201ENST00000329231 KRTAP10-4P60372 401 aaPredicted RBP17.58■□□□□ 0.4
ATPAF1-201ENST00000329231 RPL37AP61513 92 aaKnown RBP17.58■□□□□ 0.4
ATPAF1-201ENST00000329231 A0A087WYN8 130 aa17.57■□□□□ 0.4
ATPAF1-201ENST00000329231 APOMO95445 188 aa17.57■□□□□ 0.4
ATPAF1-201ENST00000329231 C5orf38Q86SI9 138 aa17.57■□□□□ 0.4
ATPAF1-201ENST00000329231 YPEL4Q96NS1 127 aa17.57■□□□□ 0.4
ATPAF1-201ENST00000329231 IFITM10A6NMD0 228 aa17.56■□□□□ 0.4
ATPAF1-201ENST00000329231 G0S2P27469 103 aa17.56■□□□□ 0.4
ATPAF1-201ENST00000329231 SYCNQ0VAF6 134 aa17.56■□□□□ 0.4
ATPAF1-201ENST00000329231 IGLV4-69A0A075B6H9 119 aa17.54■□□□□ 0.4
ATPAF1-201ENST00000329231 IGLV4-3A0A075B6K6 122 aa17.54■□□□□ 0.4
ATPAF1-201ENST00000329231 IGKV2-24A0A0C4DH68 120 aa17.54■□□□□ 0.4
ATPAF1-201ENST00000329231 SMCO4Q9NRQ5 59 aa17.54■□□□□ 0.4
ATPAF1-201ENST00000329231 LINC01546A6NGU7 62 aa17.53■□□□□ 0.4
ATPAF1-201ENST00000329231 MAJINQ3KP22 176 aa17.53■□□□□ 0.4
ATPAF1-201ENST00000329231 TMEM141Q96I45 108 aa17.53■□□□□ 0.4
ATPAF1-201ENST00000329231 PLAC8Q9NZF1 115 aa17.53■□□□□ 0.4
ATPAF1-201ENST00000329231 LINC00474Q9P2X8 69 aa17.52■□□□□ 0.4
ATPAF1-201ENST00000329231 MYCBP2O75592 4640 aa17.51■□□□□ 0.39
ATPAF1-201ENST00000329231 IGHV3OR16-9A0A0B4J2B5 98 aa17.51■□□□□ 0.39
ATPAF1-201ENST00000329231 NPSP0C0P6 89 aa17.51■□□□□ 0.39
ATPAF1-201ENST00000329231 CBLN2Q8IUK8 224 aa17.51■□□□□ 0.39
ATPAF1-201ENST00000329231 A0A096LNI7 61 aa17.5■□□□□ 0.39
ATPAF1-201ENST00000329231 C2orf48Q96LS8 159 aa17.5■□□□□ 0.39
ATPAF1-201ENST00000329231 CAMK2N2Q96S95 79 aa17.5■□□□□ 0.39
ATPAF1-201ENST00000329231 IGIPA6NJ69 53 aa17.49■□□□□ 0.39
ATPAF1-201ENST00000329231 FA2HQ7L5A8 372 aa17.49■□□□□ 0.39
ATPAF1-201ENST00000329231 OR10D4PQ8NGN7 298 aa17.49■□□□□ 0.39
ATPAF1-201ENST00000329231 TOMM6Q96B49 74 aa17.49■□□□□ 0.39
ATPAF1-201ENST00000329231 DMBT1Q9UGM3 2413 aaPredicted RBP17.49■□□□□ 0.39
ATPAF1-201ENST00000329231 SPAG11BQ08648 103 aa17.48■□□□□ 0.39
ATPAF1-201ENST00000329231 Q6ZN92 141 aa17.48■□□□□ 0.39
ATPAF1-201ENST00000329231 TEX43Q6ZNM6 134 aa17.48■□□□□ 0.39
ATPAF1-201ENST00000329231 Q6ZRU5 148 aa17.48■□□□□ 0.39
ATPAF1-201ENST00000329231 STPG4Q8N801 248 aa17.47■□□□□ 0.39
ATPAF1-201ENST00000329231 C18orf32Q8TCD1 76 aa17.46■□□□□ 0.39
ATPAF1-201ENST00000329231 TIMM17AQ99595 171 aa17.46■□□□□ 0.39
ATPAF1-201ENST00000329231 C2orf88Q9BSF0 95 aa17.46■□□□□ 0.39
ATPAF1-201ENST00000329231 LINC01549A6NIU2 74 aa17.45■□□□□ 0.38
ATPAF1-201ENST00000329231 J3QL48 77 aa17.45■□□□□ 0.38
ATPAF1-201ENST00000329231 ORAOV1Q8WV07 137 aa17.45■□□□□ 0.38
ATPAF1-201ENST00000329231 AMELXQ99217 191 aa17.45■□□□□ 0.38
ATPAF1-201ENST00000329231 VCX2Q9H322 139 aa17.45■□□□□ 0.38
ATPAF1-201ENST00000329231 LOC107984640A0A0U1RRK4 108 aa17.44■□□□□ 0.38
ATPAF1-201ENST00000329231 PAPPA-AS1Q5QFB9 102 aa17.44■□□□□ 0.38
ATPAF1-201ENST00000329231 C7orf33Q8WU49 177 aa17.44■□□□□ 0.38
ATPAF1-201ENST00000329231 KRTAP29-1A8MX34 341 aaPredicted RBP17.43■□□□□ 0.38
ATPAF1-201ENST00000329231 LINC00242Q5T6M2 205 aa17.43■□□□□ 0.38
ATPAF1-201ENST00000329231 LINC00173Q6ZV60 143 aa17.43■□□□□ 0.38
ATPAF1-201ENST00000329231 F8WDY8 70 aa17.42■□□□□ 0.38
ATPAF1-201ENST00000329231 ERASQ7Z444 233 aa17.42■□□□□ 0.38
ATPAF1-201ENST00000329231 SCGB3A1Q96QR1 104 aa17.42■□□□□ 0.38
ATPAF1-201ENST00000329231 A0A087WZ39 114 aa17.41■□□□□ 0.38
ATPAF1-201ENST00000329231 UBE2D1P51668 147 aa17.41■□□□□ 0.38
ATPAF1-201ENST00000329231 ZC2HC1BQ5TFG8 222 aa17.41■□□□□ 0.38
ATPAF1-201ENST00000329231 PTTG1IPP53801 180 aa17.4■□□□□ 0.38
ATPAF1-201ENST00000329231 LINC00614P0C842 121 aa17.39■□□□□ 0.37
ATPAF1-201ENST00000329231 GAGE2BQ13066 116 aa17.39■□□□□ 0.37
ATPAF1-201ENST00000329231 RNF151Q2KHN1 245 aa17.39■□□□□ 0.37
ATPAF1-201ENST00000329231 URB1-AS1Q96HZ7 61 aa17.39■□□□□ 0.37
ATPAF1-201ENST00000329231 NDUFA1O15239 70 aa17.37■□□□□ 0.37
ATPAF1-201ENST00000329231 RAB5BP61020 215 aa17.37■□□□□ 0.37
ATPAF1-201ENST00000329231 MRPL35Q9NZE8 188 aaKnown RBP17.37■□□□□ 0.37
ATPAF1-201ENST00000329231 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.36■□□□□ 0.37
ATPAF1-201ENST00000329231 HNRNPA3P51991 378 aaKnown RBP17.36■□□□□ 0.37
ATPAF1-201ENST00000329231 OXTP01178 125 aa17.35■□□□□ 0.37
ATPAF1-201ENST00000329231 FAM19A3Q7Z5A8 133 aa17.35■□□□□ 0.37
ATPAF1-201ENST00000329231 LINC01561Q8N1V8 128 aa17.34■□□□□ 0.37
ATPAF1-201ENST00000329231 HERC1Q15751 4861 aa17.34■□□□□ 0.37
ATPAF1-201ENST00000329231 RPL18AQ02543 176 aaKnown RBP17.33■□□□□ 0.36
ATPAF1-201ENST00000329231 A0A096LNJ9 63 aa17.32■□□□□ 0.36
ATPAF1-201ENST00000329231 A0A0J9YXV3 536 aa17.32■□□□□ 0.36
ATPAF1-201ENST00000329231 SEC11AP67812 179 aa17.32■□□□□ 0.36
ATPAF1-201ENST00000329231 HBDP02042 147 aa17.31■□□□□ 0.36
ATPAF1-201ENST00000329231 COLCA2A8K830 154 aa17.3■□□□□ 0.36
ATPAF1-201ENST00000329231 TRGC2P03986 189 aa17.3■□□□□ 0.36
ATPAF1-201ENST00000329231 KIAA0087Q14695 138 aa17.3■□□□□ 0.36
ATPAF1-201ENST00000329231 UNQ6190/PRO20217Q6UXQ8 127 aa17.3■□□□□ 0.36
ATPAF1-201ENST00000329231 HERVK_113P63121 156 aa17.29■□□□□ 0.36
ATPAF1-201ENST00000329231 C10orf25Q5T742 122 aa17.29■□□□□ 0.36
ATPAF1-201ENST00000329231 PMCHL1Q16048 86 aa17.28■□□□□ 0.36
ATPAF1-201ENST00000329231 PMVKQ15126 192 aa17.27■□□□□ 0.36
ATPAF1-201ENST00000329231 CHCHD1Q96BP2 118 aaKnown RBP17.27■□□□□ 0.36
ATPAF1-201ENST00000329231 CST9LQ9H4G1 147 aa17.27■□□□□ 0.36
ATPAF1-201ENST00000329231 GEMIN7Q9H840 131 aaKnown RBP17.27■□□□□ 0.36
ATPAF1-201ENST00000329231 C6orf48Q9UBA6 75 aa17.27■□□□□ 0.36
ATPAF1-201ENST00000329231 PRR3P79522 188 aaKnown RBP17.26■□□□□ 0.35
ATPAF1-201ENST00000329231 A0A1W2PNN7 141 aa17.25■□□□□ 0.35
ATPAF1-201ENST00000329231 TLX1NBP0CAT3 122 aa17.25■□□□□ 0.35
ATPAF1-201ENST00000329231 PDZD11Q5EBL8 140 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms