RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 FAM231CP0DMU5 169 aa1.67□□□□□ -2.14
SKP1-201ENST00000328392 INSL3P51460 131 aa1.67□□□□□ -2.14
SKP1-201ENST00000328392 RAB4BP61018 213 aa1.67□□□□□ -2.14
SKP1-201ENST00000328392 HBBP68871 147 aa1.67□□□□□ -2.14
SKP1-201ENST00000328392 SDIM1Q6ZPB5 146 aa1.67□□□□□ -2.14
SKP1-201ENST00000328392 FOXI2Q6ZQN5 318 aa1.67□□□□□ -2.14
SKP1-201ENST00000328392 SMIM15Q7Z3B0 74 aa1.67□□□□□ -2.14
SKP1-201ENST00000328392 NDUFA11Q86Y39 141 aa1.67□□□□□ -2.14
SKP1-201ENST00000328392 OR11H1Q8NG94 326 aa1.67□□□□□ -2.14
SKP1-201ENST00000328392 OR2D3Q8NGH3 330 aa1.67□□□□□ -2.14
SKP1-201ENST00000328392 DYNLRB2Q8TF09 96 aa1.67□□□□□ -2.14
SKP1-201ENST00000328392 DCANP1Q8TF63 244 aa1.67□□□□□ -2.14
SKP1-201ENST00000328392 AGPAT4-IT1Q9H0P7 198 aa1.67□□□□□ -2.14
SKP1-201ENST00000328392 RNASE7Q9H1E1 156 aaKnown RBP1.67□□□□□ -2.14
SKP1-201ENST00000328392 MS4A6AQ9H2W1 248 aa1.67□□□□□ -2.14
SKP1-201ENST00000328392 SETXQ7Z333 2677 aaKnown RBP1.67□□□□□ -2.14
SKP1-201ENST00000328392 TEP1Q99973 2627 aaKnown RBP1.66□□□□□ -2.14
SKP1-201ENST00000328392 TRGV4A0A0C4DH28 118 aa1.66□□□□□ -2.14
SKP1-201ENST00000328392 ZNF705FA8MVS1 300 aaPredicted RBP1.66□□□□□ -2.14
SKP1-201ENST00000328392 HIST1H2BKO60814 126 aa1.66□□□□□ -2.14
SKP1-201ENST00000328392 PPP1R17O96001 155 aa1.66□□□□□ -2.14
SKP1-201ENST00000328392 ORM1P02763 201 aa1.66□□□□□ -2.14
SKP1-201ENST00000328392 PPBPP02775 128 aa1.66□□□□□ -2.14
SKP1-201ENST00000328392 HIST1H2BJP06899 126 aa1.66□□□□□ -2.14
SKP1-201ENST00000328392 GPX1P07203 203 aa1.66□□□□□ -2.14
SKP1-201ENST00000328392 ESDP10768 282 aa1.66□□□□□ -2.14
SKP1-201ENST00000328392 HIST1H2BOP23527 126 aa1.66□□□□□ -2.14
SKP1-201ENST00000328392 HIST1H2BBP33778 126 aa1.66□□□□□ -2.14
SKP1-201ENST00000328392 TCL1AP56279 114 aa1.66□□□□□ -2.14
SKP1-201ENST00000328392 HIST1H2BDP58876 126 aa1.66□□□□□ -2.14
SKP1-201ENST00000328392 HIST1H2BCP62807 126 aa1.66□□□□□ -2.14
SKP1-201ENST00000328392 FABP9Q0Z7S8 132 aa1.66□□□□□ -2.14
SKP1-201ENST00000328392 HIST2H2BEQ16778 126 aa1.66□□□□□ -2.14
SKP1-201ENST00000328392 DEFB114Q30KQ6 69 aa1.66□□□□□ -2.14
SKP1-201ENST00000328392 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
SKP1-201ENST00000328392 MRPL51Q4U2R6 128 aaKnown RBP1.66□□□□□ -2.14
SKP1-201ENST00000328392 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.66□□□□□ -2.14
SKP1-201ENST00000328392 C10orf99Q6UWK7 81 aa1.66□□□□□ -2.14
SKP1-201ENST00000328392 NUP35Q8NFH5 326 aa1.66□□□□□ -2.14
SKP1-201ENST00000328392 HIST1H2BHQ93079 126 aa1.66□□□□□ -2.14
SKP1-201ENST00000328392 ZC2HC1AQ96GY0 325 aa1.66□□□□□ -2.14
SKP1-201ENST00000328392 PACRGQ96M98 296 aaPredicted RBP1.66□□□□□ -2.14
SKP1-201ENST00000328392 HIST1H2BNQ99877 126 aa1.66□□□□□ -2.14
SKP1-201ENST00000328392 HIST1H2BMQ99879 126 aa1.66□□□□□ -2.14
SKP1-201ENST00000328392 CNFNQ9BYD5 112 aa1.66□□□□□ -2.14
SKP1-201ENST00000328392 OTOGQ6ZRI0 2925 aa1.66□□□□□ -2.14
SKP1-201ENST00000328392 NBPF19A0A087WUL8 3843 aa1.65□□□□□ -2.14
SKP1-201ENST00000328392 SVEP1Q4LDE5 3571 aa1.65□□□□□ -2.15
SKP1-201ENST00000328392 CSMD2Q7Z408 3487 aa1.65□□□□□ -2.15
SKP1-201ENST00000328392 IGKV3-7A0A075B6H7 116 aa1.65□□□□□ -2.15
SKP1-201ENST00000328392 LOC105371267A0A1B0GV96 52 aa1.65□□□□□ -2.15
SKP1-201ENST00000328392 C7orf71A4D174 169 aa1.65□□□□□ -2.15
SKP1-201ENST00000328392 A8MTW9 85 aa1.65□□□□□ -2.15
SKP1-201ENST00000328392 OR11H12B2RN74 326 aa1.65□□□□□ -2.15
SKP1-201ENST00000328392 TRGC1P0CF51 173 aa1.65□□□□□ -2.15
SKP1-201ENST00000328392 HLA-DRB4P13762 266 aa1.65□□□□□ -2.15
SKP1-201ENST00000328392 S100A4P26447 101 aaKnown RBP1.65□□□□□ -2.15
SKP1-201ENST00000328392 HLA-DMBP28068 263 aa1.65□□□□□ -2.15
SKP1-201ENST00000328392 RNASE4P34096 147 aaKnown RBP1.65□□□□□ -2.15
SKP1-201ENST00000328392 FUSP35637 526 aaKnown RBP eCLIP1.65□□□□□ -2.15
SKP1-201ENST00000328392 ASIPP42127 132 aa1.65□□□□□ -2.15
SKP1-201ENST00000328392 CRIP1P50238 77 aa1.65□□□□□ -2.15
SKP1-201ENST00000328392 AKR1D1P51857 326 aa1.65□□□□□ -2.15
SKP1-201ENST00000328392 NDUFA6P56556 154 aa1.65□□□□□ -2.15
SKP1-201ENST00000328392 Q0VG73 95 aa1.65□□□□□ -2.15
SKP1-201ENST00000328392 C4orf26Q17RF5 130 aa1.65□□□□□ -2.15
SKP1-201ENST00000328392 DEFB136Q30KP8 78 aa1.65□□□□□ -2.15
SKP1-201ENST00000328392 TDRG1Q3Y452 100 aa1.65□□□□□ -2.15
SKP1-201ENST00000328392 PSMG4Q5JS54 123 aa1.65□□□□□ -2.15
SKP1-201ENST00000328392 SPANXN1Q5VSR9 72 aa1.65□□□□□ -2.15
SKP1-201ENST00000328392 MRPL54Q6P161 138 aaKnown RBP1.65□□□□□ -2.15
SKP1-201ENST00000328392 LYZL1Q6UWQ5 148 aa1.65□□□□□ -2.15
SKP1-201ENST00000328392 LINC00322Q6ZN03 302 aaPredicted RBP1.65□□□□□ -2.15
SKP1-201ENST00000328392 BAGE3Q86Y29 109 aa1.65□□□□□ -2.15
SKP1-201ENST00000328392 Q8TAT8 98 aa1.65□□□□□ -2.15
SKP1-201ENST00000328392 SMR3AQ99954 134 aa1.65□□□□□ -2.15
SKP1-201ENST00000328392 TMEM191AQ9H0A3 160 aa1.65□□□□□ -2.15
SKP1-201ENST00000328392 LAMTOR2Q9Y2Q5 125 aa1.65□□□□□ -2.15
SKP1-201ENST00000328392 MRPS16Q9Y3D3 137 aaKnown RBP1.65□□□□□ -2.15
SKP1-201ENST00000328392 HLA-DRB4X5D2U9 266 aa1.65□□□□□ -2.15
SKP1-201ENST00000328392 NIPBLQ6KC79 2804 aaeCLIP1.65□□□□□ -2.15
SKP1-201ENST00000328392 COL6A5A8TX70 2615 aa1.65□□□□□ -2.15
SKP1-201ENST00000328392 MAST4O15021 2626 aa1.65□□□□□ -2.15
SKP1-201ENST00000328392 MUC4Q99102 2169 aa1.64□□□□□ -2.15
SKP1-201ENST00000328392 TMSB15BA0A087X1C1 80 aa1.64□□□□□ -2.15
SKP1-201ENST00000328392 LINC01549A6NIU2 74 aa1.64□□□□□ -2.15
SKP1-201ENST00000328392 F5H768 121 aa1.64□□□□□ -2.15
SKP1-201ENST00000328392 K7EMI3 77 aa1.64□□□□□ -2.15
SKP1-201ENST00000328392 SPINK4O60575 86 aa1.64□□□□□ -2.15
SKP1-201ENST00000328392 IGLV1-51P01701 117 aa1.64□□□□□ -2.15
SKP1-201ENST00000328392 ARMS2P0C7Q2 107 aa1.64□□□□□ -2.15
SKP1-201ENST00000328392 IGLC6P0CF74 106 aa1.64□□□□□ -2.15
SKP1-201ENST00000328392 SMIM6P0DI80 62 aa1.64□□□□□ -2.15
SKP1-201ENST00000328392 SMIM17P0DL12 118 aa1.64□□□□□ -2.15
SKP1-201ENST00000328392 GZMBP10144 247 aa1.64□□□□□ -2.15
SKP1-201ENST00000328392 G0S2P27469 103 aa1.64□□□□□ -2.15
SKP1-201ENST00000328392 SRIP30626 198 aa1.64□□□□□ -2.15
SKP1-201ENST00000328392 CKS2P33552 79 aa1.64□□□□□ -2.15
SKP1-201ENST00000328392 ZNF80P51504 273 aaPredicted RBP1.64□□□□□ -2.15
SKP1-201ENST00000328392 LINC00313P59037 77 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms