RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 GAGE5Q13069 117 aa6.17□□□□□ -1.42
CLK1-201ENST00000321356 BBC3Q96PG8 261 aaPredicted RBP6.17□□□□□ -1.42
CLK1-201ENST00000321356 TMEM243Q9BU79 118 aa6.17□□□□□ -1.42
CLK1-201ENST00000321356 ZNF469Q96JG9 3925 aaPredicted RBP6.17□□□□□ -1.42
CLK1-201ENST00000321356 C2CD3Q4AC94 2353 aa6.16□□□□□ -1.42
CLK1-201ENST00000321356 A0A0U1RRA0 63 aa6.16□□□□□ -1.42
CLK1-201ENST00000321356 NOP10Q9NPE3 64 aaKnown RBP6.16□□□□□ -1.42
CLK1-201ENST00000321356 NOTCH3Q9UM47 2321 aa6.16□□□□□ -1.42
CLK1-201ENST00000321356 FLNAP21333 2647 aaKnown RBP6.16□□□□□ -1.42
CLK1-201ENST00000321356 TRBV6-4A0A1B0GX49 114 aa6.15□□□□□ -1.42
CLK1-201ENST00000321356 A0A1W2PRX2 142 aa6.15□□□□□ -1.42
CLK1-201ENST00000321356 TRACP01848 142 aa6.15□□□□□ -1.42
CLK1-201ENST00000321356 CMC4P56277 68 aaPredicted RBP6.15□□□□□ -1.42
CLK1-201ENST00000321356 MEIG1Q5JSS6 88 aa6.15□□□□□ -1.42
CLK1-201ENST00000321356 C16orf74Q96GX8 76 aa6.15□□□□□ -1.42
CLK1-201ENST00000321356 FAM110AQ9BQ89 295 aa6.15□□□□□ -1.42
CLK1-201ENST00000321356 C11orf44Q8N8P7 122 aa6.15□□□□□ -1.43
CLK1-201ENST00000321356 OVOL2Q9BRP0 275 aa6.15□□□□□ -1.43
CLK1-201ENST00000321356 ESM1Q9NQ30 184 aa6.15□□□□□ -1.43
CLK1-201ENST00000321356 SETD2Q9BYW2 2564 aaPredicted RBP6.14□□□□□ -1.43
CLK1-201ENST00000321356 UBE2L6O14933 153 aa6.14□□□□□ -1.43
CLK1-201ENST00000321356 PF4P02776 101 aa6.14□□□□□ -1.43
CLK1-201ENST00000321356 FAM222AQ5U5X8 452 aa6.14□□□□□ -1.43
CLK1-201ENST00000321356 ZNF843Q8N446 348 aa6.14□□□□□ -1.43
CLK1-201ENST00000321356 C19orf73Q9NVV2 129 aa6.14□□□□□ -1.43
CLK1-201ENST00000321356 TRBV7-7A0A0K0K1E9 115 aa6.13□□□□□ -1.43
CLK1-201ENST00000321356 LOC100131303A0A0U1RQF7 123 aa6.13□□□□□ -1.43
CLK1-201ENST00000321356 GAGE6Q13070 117 aa6.13□□□□□ -1.43
CLK1-201ENST00000321356 TTC32Q5I0X7 151 aa6.13□□□□□ -1.43
CLK1-201ENST00000321356 CSNK1G2-AS1Q8NCQ2 148 aa6.13□□□□□ -1.43
CLK1-201ENST00000321356 C22orf24Q9Y442 160 aa6.13□□□□□ -1.43
CLK1-201ENST00000321356 GAGE7O76087 117 aa6.13□□□□□ -1.43
CLK1-201ENST00000321356 IGLV1-51P01701 117 aa6.13□□□□□ -1.43
CLK1-201ENST00000321356 ACYP1P07311 99 aa6.13□□□□□ -1.43
CLK1-201ENST00000321356 GAGE12FP0CL80 117 aa6.13□□□□□ -1.43
CLK1-201ENST00000321356 GAGE12GP0CL81 117 aa6.13□□□□□ -1.43
CLK1-201ENST00000321356 GAGE12IP0CL82 117 aa6.13□□□□□ -1.43
CLK1-201ENST00000321356 COX7B2Q8TF08 81 aa6.13□□□□□ -1.43
CLK1-201ENST00000321356 TRGV2A0A075B6R0 118 aa6.12□□□□□ -1.43
CLK1-201ENST00000321356 TRAV13-2A0A0B4J235 113 aa6.12□□□□□ -1.43
CLK1-201ENST00000321356 IGHV3OR16-9A0A0B4J2B5 98 aa6.12□□□□□ -1.43
CLK1-201ENST00000321356 RPL28P46779 137 aaKnown RBP6.12□□□□□ -1.43
CLK1-201ENST00000321356 HIST2H2BCQ6DN03 193 aa6.12□□□□□ -1.43
CLK1-201ENST00000321356 FAM218AQ96MZ4 157 aa6.12□□□□□ -1.43
CLK1-201ENST00000321356 WFDC10AQ9H1F0 79 aa6.12□□□□□ -1.43
CLK1-201ENST00000321356 CCDC168Q8NDH2 2452 aa6.12□□□□□ -1.43
CLK1-201ENST00000321356 TRBV6-8A0A0A6YYG3 113 aa6.11□□□□□ -1.43
CLK1-201ENST00000321356 LCE2BO14633 110 aa6.11□□□□□ -1.43
CLK1-201ENST00000321356 SDIM1Q6ZPB5 146 aa6.11□□□□□ -1.43
CLK1-201ENST00000321356 MIR7-3HGQ8N6C7 128 aa6.11□□□□□ -1.43
CLK1-201ENST00000321356 LINC00337Q8N6G1 96 aa6.11□□□□□ -1.43
CLK1-201ENST00000321356 WFDC11Q8NEX6 87 aa6.11□□□□□ -1.43
CLK1-201ENST00000321356 LINC01006Q8NI28 216 aa6.11□□□□□ -1.43
CLK1-201ENST00000321356 C16orf95Q9H693 158 aa6.11□□□□□ -1.43
CLK1-201ENST00000321356 IGLV4-60A0A075B6I1 120 aa6.11□□□□□ -1.43
CLK1-201ENST00000321356 IGKV2-28A0A075B6P5 120 aa6.11□□□□□ -1.43
CLK1-201ENST00000321356 IGKV2D-28P01615 120 aa6.11□□□□□ -1.43
CLK1-201ENST00000321356 CRPP02741 224 aa6.11□□□□□ -1.43
CLK1-201ENST00000321356 BAALC-AS2P0C853 105 aa6.11□□□□□ -1.43
CLK1-201ENST00000321356 FHL2Q14192 279 aa6.11□□□□□ -1.43
CLK1-201ENST00000321356 NBPF19A0A087WUL8 3843 aa6.1□□□□□ -1.43
CLK1-201ENST00000321356 ANK3Q12955 4377 aaKnown RBP6.1□□□□□ -1.43
CLK1-201ENST00000321356 TRGV4A0A0C4DH28 118 aa6.1□□□□□ -1.43
CLK1-201ENST00000321356 RPL35AP18077 110 aaKnown RBP6.1□□□□□ -1.43
CLK1-201ENST00000321356 A0A087WZ39 114 aa6.09□□□□□ -1.43
CLK1-201ENST00000321356 IBA57-AS1B1ANH7 110 aa6.09□□□□□ -1.43
CLK1-201ENST00000321356 RNASE1P07998 156 aaKnown RBP6.09□□□□□ -1.43
CLK1-201ENST00000321356 KRTAP1-1Q07627 177 aa6.09□□□□□ -1.43
CLK1-201ENST00000321356 IMUPQ9GZP8 106 aa6.09□□□□□ -1.43
CLK1-201ENST00000321356 SND1-IT1Q9HBX3 110 aa6.09□□□□□ -1.43
CLK1-201ENST00000321356 CUBNO60494 3623 aa6.09□□□□□ -1.44
CLK1-201ENST00000321356 TENM4Q6N022 2769 aa6.09□□□□□ -1.44
CLK1-201ENST00000321356 B5MCH6 92 aa6.09□□□□□ -1.44
CLK1-201ENST00000321356 CCDC179H3BU77 68 aa6.09□□□□□ -1.44
CLK1-201ENST00000321356 PLA2G2AP14555 144 aa6.09□□□□□ -1.44
CLK1-201ENST00000321356 SMCR5Q8TEV8 140 aa6.09□□□□□ -1.44
CLK1-201ENST00000321356 PDZD2O15018 2839 aa6.09□□□□□ -1.44
CLK1-201ENST00000321356 CCL18P55774 89 aa6.08□□□□□ -1.44
CLK1-201ENST00000321356 LINC00612Q8N6U2 182 aa6.08□□□□□ -1.44
CLK1-201ENST00000321356 TOMM7Q9P0U1 55 aa6.08□□□□□ -1.44
CLK1-201ENST00000321356 MTORP42345 2549 aa6.07□□□□□ -1.44
CLK1-201ENST00000321356 INAFM2P0DMQ5 153 aa6.07□□□□□ -1.44
CLK1-201ENST00000321356 LINC00158P58513 81 aa6.07□□□□□ -1.44
CLK1-201ENST00000321356 LINC00643Q86TS7 51 aa6.07□□□□□ -1.44
CLK1-201ENST00000321356 SMIM11BQ8TCY0 68 aa6.07□□□□□ -1.44
CLK1-201ENST00000321356 CHCHD5Q9BSY4 110 aa6.07□□□□□ -1.44
CLK1-201ENST00000321356 IGKV3OR2-268A0A0C4DH90 116 aa6.07□□□□□ -1.44
CLK1-201ENST00000321356 LINC00959A0A1B0GUT2 108 aa6.07□□□□□ -1.44
CLK1-201ENST00000321356 MALP21145 153 aa6.07□□□□□ -1.44
CLK1-201ENST00000321356 KIR2DL5BQ8NHK3 375 aa6.07□□□□□ -1.44
CLK1-201ENST00000321356 H0YGX0 51 aa6.06□□□□□ -1.44
CLK1-201ENST00000321356 Q9HAA7 133 aa6.06□□□□□ -1.44
CLK1-201ENST00000321356 SS18L2Q9UHA2 77 aa6.06□□□□□ -1.44
CLK1-201ENST00000321356 ACANP16112 2415 aa6.06□□□□□ -1.44
CLK1-201ENST00000321356 GCN1Q92616 2671 aaKnown RBP6.05□□□□□ -1.44
CLK1-201ENST00000321356 A0A087WYN8 130 aa6.05□□□□□ -1.44
CLK1-201ENST00000321356 C5orf38Q86SI9 138 aa6.05□□□□□ -1.44
CLK1-201ENST00000321356 OBSCN-AS1Q96MR7 158 aa6.05□□□□□ -1.44
CLK1-201ENST00000321356 A0A1B0GUV1 79 aa6.05□□□□□ -1.44
CLK1-201ENST00000321356 LY6G6DO95868 133 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms